Miyakogusa Predicted Gene

Lj3g3v2385390.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2385390.1 Non Characterized Hit- tr|A9NM38|A9NM38_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,35.78,0.00000000009,DnaJ,Heat shock protein DnaJ, N-terminal;
seg,NULL; Chaperone J-domain,Heat shock protein DnaJ,
N-te,CUFF.43942.1
         (161 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g094275.1 | chaperone DnaJ domain protein | HC | chr4:3759...   131   3e-31
Medtr2g008540.1 | chaperone DnaJ domain protein | HC | chr2:1530...   103   7e-23
Medtr2g008520.1 | chaperone DnaJ domain protein | HC | chr2:1516...   103   7e-23

>Medtr4g094275.1 | chaperone DnaJ domain protein | HC |
           chr4:37592734-37593635 | 20130731
          Length = 179

 Score =  131 bits (330), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 88/170 (51%), Positives = 101/170 (59%), Gaps = 30/170 (17%)

Query: 16  KTFHCLPQSSKQQRTSQVHFA-ISCRGATKLKEETTYG-NLYKVLSLKPGN--------- 64
           K FH L   SKQ R S VHFA ISCR ATKL EET  G N YK+LS+ P +         
Sbjct: 16  KQFHHL---SKQLRPSHVHFATISCR-ATKLVEETKNGSNFYKMLSVNPKSATMEDIKRA 71

Query: 65  --------HPDVCHDPSMKEESTRMFVQLNAAYKTLSNPLLREQYDSEINLGFR---SEM 113
                   HPDVCHDPSMKEEST++FV+LNAAY+TLSNP+LREQYDSE  LG R      
Sbjct: 72  YRSMALQYHPDVCHDPSMKEESTKIFVRLNAAYETLSNPMLREQYDSE--LGLRNNMMNN 129

Query: 114 KVCDDDEGLRSRWQEQVVELK--TXXXXXXXXXXXXXXXXXXTQNMKNRN 161
               ++E  RSRWQEQVVELK  +                  TQ+MK+RN
Sbjct: 130 NNIVNEEIWRSRWQEQVVELKKRSNRRMEQRGRSWGSTSRMRTQSMKDRN 179


>Medtr2g008540.1 | chaperone DnaJ domain protein | HC |
           chr2:1530763-1530220 | 20130731
          Length = 173

 Score =  103 bits (257), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 62/135 (45%), Positives = 76/135 (56%), Gaps = 35/135 (25%)

Query: 19  HCLPQSSKQQRTSQVHFAISCRGATKL---KEETTYGNLYKVLSLKPGN----------- 64
           H LP SS+Q R   + F++SCR    +    E    GNLYK+L L P +           
Sbjct: 21  HILPLSSRQPR---MQFSVSCRATKNVPIHNELNDDGNLYKILCLSPKSATMDDIKRAYR 77

Query: 65  ------HPDVCHDPSMKEESTRMFVQLNAAYKTLSNPLLREQYDSEINLGFRSEMKVCDD 118
                 HPDVCHD   KEEST+MFVQLNAAY+TLSNP L+E+YD E++LG R        
Sbjct: 78  TMALQYHPDVCHDRLKKEESTKMFVQLNAAYETLSNPKLKEEYDFELSLGLR-------- 129

Query: 119 DEGLRSRWQEQVVEL 133
               RSR  EQ+VEL
Sbjct: 130 ----RSRLMEQMVEL 140


>Medtr2g008520.1 | chaperone DnaJ domain protein | HC |
           chr2:1516532-1515990 | 20130731
          Length = 173

 Score =  103 bits (257), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 62/135 (45%), Positives = 76/135 (56%), Gaps = 35/135 (25%)

Query: 19  HCLPQSSKQQRTSQVHFAISCRGATKL---KEETTYGNLYKVLSLKPGN----------- 64
           H LP SS+Q R   + F++SCR    +    E    GNLYK+L L P +           
Sbjct: 21  HILPLSSRQPR---MQFSVSCRATKNVPIHNELNDDGNLYKILCLSPKSATMDDIKRAYR 77

Query: 65  ------HPDVCHDPSMKEESTRMFVQLNAAYKTLSNPLLREQYDSEINLGFRSEMKVCDD 118
                 HPDVCHD   KEEST+MFVQLNAAY+TLSNP L+E+YD E++LG R        
Sbjct: 78  TMALQYHPDVCHDRLKKEESTKMFVQLNAAYETLSNPKLKEEYDFELSLGLR-------- 129

Query: 119 DEGLRSRWQEQVVEL 133
               RSR  EQ+VEL
Sbjct: 130 ----RSRLMEQMVEL 140