Miyakogusa Predicted Gene

Lj3g3v2364200.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2364200.1 Non Characterized Hit- tr|K3YDP0|K3YDP0_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si012345,28.57,1e-18,seg,NULL; DUF1191,Protein of unknown function
DUF1191,NODE_43185_length_1595_cov_18.417555.path1.1
         (241 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g028165.1 | plant/F17O14-7 protein | HC | chr8:10504807-10...   290   1e-78
Medtr3g062840.1 | plant/F17O14-7 protein | HC | chr3:28400981-28...   121   7e-28
Medtr5g075750.1 | plant/F17O14-7 protein | LC | chr5:32231880-32...   102   5e-22
Medtr8g461170.1 | plant/F17O14-7 protein | HC | chr8:21471380-21...   101   6e-22
Medtr7g074120.1 | plant/F17O14-7 protein | HC | chr7:27687458-27...    98   9e-21
Medtr3g010800.1 | transmembrane protein, putative | HC | chr3:25...    66   3e-11

>Medtr8g028165.1 | plant/F17O14-7 protein | HC |
           chr8:10504807-10503031 | 20130731
          Length = 295

 Score =  290 bits (741), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 142/237 (59%), Positives = 167/237 (70%), Gaps = 8/237 (3%)

Query: 1   MEIAVIRLRTDSFWLRGVKHSFLNFPPRVVPQPNRERMAIVYENLGNWSSHYYNVPNHTM 60
           ME+ V+RLRT SF+ RGV  SF N PP VVPQP R+RMAI+YEN GNWSSHY+NVPN+TM
Sbjct: 66  MEVRVVRLRTSSFYKRGVNSSFFNVPPHVVPQPIRKRMAILYENFGNWSSHYFNVPNYTM 125

Query: 61  VAPVFGFRAYTSSEKALISTEKMDLII-EGDPITIQFHHVGPHEKNNSPICAKFGAGGSV 119
           VAPVFGF AYTSS  + +  EKM+L+I +G+PI I FHHV  HEKN++PIC KF   G++
Sbjct: 126 VAPVFGFVAYTSSGNSFMDNEKMNLVITQGNPILIHFHHVRLHEKNDTPICVKFSDSGNL 185

Query: 120 EFNNMTKPYVCEAETPGHYTLVXXXXXXXXXXXXXXXXQSQSKGFNTWWVLGFVIGSXXX 179
           EFNNMTKPYVCE    GHYTLV                + QSK F  WW+LGFV+G    
Sbjct: 186 EFNNMTKPYVCETYGTGHYTLV-------VPIPKELYNKRQSKRFTIWWILGFVLGFVGL 238

Query: 180 XXXXXXXXXXXKEAKRRRIRKMEKISEGGEPFDTFWIGDTKLPLAPMIRTQPVLEND 236
                      K AK+ RI+K+E+ SE GE FDTFWIG+TKLPLAP IRTQPVLEND
Sbjct: 239 VVLILLLVTLVKAAKKTRIKKLERNSENGESFDTFWIGETKLPLAPTIRTQPVLEND 295


>Medtr3g062840.1 | plant/F17O14-7 protein | HC |
           chr3:28400981-28399252 | 20130731
          Length = 311

 Score =  121 bits (303), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 3/239 (1%)

Query: 1   MEIAVIRLRTDSFWLRGVKHSFLNFPPRVVPQPNRERMAIVYENLGNWSSHYYNVPNHTM 60
           ++++ +RLR+ S   RGV++     PP VV QP  ER+ +VY NLGN S H+Y +P +T 
Sbjct: 70  VKVSTLRLRSGSLRTRGVQYKEFQIPPGVVEQPYVERLVLVYHNLGNLSEHFYPLPGYTY 129

Query: 61  VAPVFGFRAYTSSEKALISTEKMDLIIEGDPITIQFHHVGPHEKNNSPICAKFGAGGSVE 120
           +APV G  +Y+  +       ++D+     PI ++F  V      + P C  F   GSV+
Sbjct: 130 LAPVLGLLSYSGVDLFANELPELDVRASDKPILVKFLKVKSAPYGSVPKCVYFDLHGSVQ 189

Query: 121 FNNMTKPYVCEAETPGHYTLVXXXXXXXXXXXXXXXXQSQS--KGFNTWWVLGFVIGSXX 178
           F+ +    VC     GH+++V                  +   +  N W ++G V+G   
Sbjct: 190 FDILLPDNVCSTMEQGHFSIVVESNAPTPAPAAVAAAVGKGGRRKSNVWIIVGSVVGGCI 249

Query: 179 XXXXXXXXXXXXKEAKR-RRIRKMEKISEGGEPFDTFWIGDTKLPLAPMIRTQPVLEND 236
                          K+  +I+++E  ++  E      IG TK PLA   RT+P +END
Sbjct: 250 LLIMLSLLVVRLVRIKKGMKIQELEWTADSHETLQMKSIGGTKAPLAIGTRTRPTIEND 308


>Medtr5g075750.1 | plant/F17O14-7 protein | LC |
           chr5:32231880-32230972 | 20130731
          Length = 302

 Score =  102 bits (253), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 115/244 (47%), Gaps = 21/244 (8%)

Query: 1   MEIAVIRLRTDSFWLRGVK-HSFLNFPPRVVPQPNRERMAIVYENLGNWSSHYYNVPNHT 59
           ++++ +RLR+ S W +GV+ +     P  V+ QP  +R+ +VY+NLGNWS +YY +  ++
Sbjct: 69  IKVSAMRLRSGSLWDKGVQSYKEFEIPEGVIEQPYFKRIVLVYQNLGNWSQYYYPLSGYS 128

Query: 60  MVAPVFGFRAYTSSEKALISTEKMDLIIEGDPITIQFHHVGPHEKNNSPI-----CAKFG 114
            +APV G  AY  +     +  +++L     PI + F +V    KN SP      C  F 
Sbjct: 129 YLAPVLGLLAYDGTNLIASNLPELELSAYHKPILVNFSYV----KNTSPYGSLAKCVYFD 184

Query: 115 AGGSVEFNNMTKPYVCEAETPGHYTLVXXXXXXXXXXXXXXXXQSQSKG-FNTWWVLGFV 173
             GS++F+ +    VC     GH ++V                Q+  K  F    V+  +
Sbjct: 185 LFGSIKFDTLLNGNVCPIFEQGHVSIV---------VESNASPQTHWKNEFKFKIVIVCL 235

Query: 174 IGSXXXXXXXXXXXXXXKEAKRR-RIRKMEKISEGGEPFDTFWIGDTKLPLAPMIRTQPV 232
            G               + AK+  +I++ME  ++  E     +IG+ K+P A   RT P 
Sbjct: 236 AGGIVLLFLFGLLISRMRRAKQETKIKQMELEADCSETLKIIYIGNAKVPSALGTRTPPK 295

Query: 233 LEND 236
           +END
Sbjct: 296 IEND 299


>Medtr8g461170.1 | plant/F17O14-7 protein | HC |
           chr8:21471380-21470496 | 20130731
          Length = 294

 Score =  101 bits (252), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 109/242 (45%), Gaps = 14/242 (5%)

Query: 1   MEIAVIRLRTDSFWLRGVK-HSFLNFPPRVVPQPNRERMAIVYENLGNWSSHYYNVP-NH 58
           ++++ +RLR+ S   R V+ +     PP V+ QP  ER+ +VY NL NWS ++Y +P  +
Sbjct: 64  IKVSALRLRSGSLRTRSVQSYKEFQIPPGVIEQPYVERLVMVYHNLANWSENFYPLPLGY 123

Query: 59  TMVAPVFGFRAYTSSEKALISTEKMDLIIEGD-PITIQFHHVGPHEKNNSPICAKFGAGG 117
           + +APV G   Y           ++D+ +  D PI I FH V P    + P+C  F   G
Sbjct: 124 SYLAPVLGLLTYRGVNLNASELPELDIKVSDDKPILITFHDVKPAPYGSVPMCVYFDLHG 183

Query: 118 SVEFNNMTKPYVCEAETPGHYTLVXXXXXXXXXXXXXXXXQSQSKGFNTWWVLGFVIGSX 177
           SV F+ +    VC     GH+++V                  + K  N W ++ + +   
Sbjct: 184 SVTFDILLPGNVCSTVQQGHFSIVVASADI-----------GKKKNTNVWMIVAWSLFVG 232

Query: 178 XXXXXXXXXXXXXKEAKRRRIRKMEKISEGGEPFDTFWIGDTKLPLAPMIRTQPVLENDD 237
                        +  + ++ +++E  S+ GE      +  T LP+A  IRT   +  +D
Sbjct: 233 CILLILLSILLFVRLRRMKKNQELELESDNGEALRITHVAGTILPVAGAIRTTTGMPMED 292

Query: 238 AV 239
            V
Sbjct: 293 VV 294


>Medtr7g074120.1 | plant/F17O14-7 protein | HC |
           chr7:27687458-27685110 | 20130731
          Length = 315

 Score = 97.8 bits (242), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 61/243 (25%), Positives = 112/243 (46%), Gaps = 5/243 (2%)

Query: 1   MEIAVIRLRTDSFWLRGVK-HSFLNFPPRVVPQPNRERMAIVYENLGNWSSHYYNVPNHT 59
           +++A +RLR+ S   +G   ++    P  ++  P  ER+  VY+NLG  S+ YY +PN+T
Sbjct: 72  VKVAALRLRSGSLRRKGFDMYNEFEIPNGLIVSPYVERLVFVYQNLGKLSNKYYPLPNYT 131

Query: 60  MVAPVFGFRAYTSSEKALISTEKMDLIIEGDPITIQFHHVGPHEKNNSPICAKFGAGGSV 119
            +APV G  AY ++  +  +  ++D+   GD I ++F  V          C  F   GS 
Sbjct: 132 YLAPVLGLLAYDAANLSATNLSELDVNASGDNILVKFQDVKSVPHGTVAKCVWFDLQGSS 191

Query: 120 EFNNMTKPYVCEAETPGHYTLVXXXXXXXXXXXXXXXXQSQSKGFNTW--WVLGFVIGSX 177
            F+N+     C     GH+++V                  + +  ++   W++   +   
Sbjct: 192 NFSNVKGGNTCSTSQQGHFSIVVKSNGAPGPVSPTPHNHGKGEKKSSKKVWIIVGSVVGG 251

Query: 178 XXXXXXXXXXXX--XKEAKRRRIRKMEKISEGGEPFDTFWIGDTKLPLAPMIRTQPVLEN 235
                          K  ++++++ ME+ ++ GE      +G+TK P A + RTQP LE+
Sbjct: 252 LLLLVLLSFLVLCINKYKQKKKMQGMERAADSGETLQMASVGETKAPAATVTRTQPTLEH 311

Query: 236 DDA 238
           + A
Sbjct: 312 EYA 314


>Medtr3g010800.1 | transmembrane protein, putative | HC |
           chr3:2596934-2595467 | 20130731
          Length = 325

 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 68/269 (25%), Positives = 107/269 (39%), Gaps = 42/269 (15%)

Query: 1   MEIAVIRLRTDSFWLRGVKHSFLNFPPRVVPQPNRERMAIVYENL---GNWSSHYY---- 53
           +++  +R R  S    G K    +    V   P  ER+ ++ +++    NWSS YY    
Sbjct: 66  IKVDTVRFRCGSLTRYGAKLKEFHLGIGVSIHPCIERVMLIRQSIEYNNNWSSIYYANYN 125

Query: 54  NVPNHTMVAPVFGFRAYTSSEKALISTEKMDLIIEGDP--ITIQFHHV----GPHEK--N 105
           ++  + +V+P+ G  AY + E +  S+    L IE     ITI F++        EK   
Sbjct: 126 DLSKYQLVSPIVGILAYNADEDSNSSSNPFQLGIEAGEKLITIDFNNATNFNNQEEKGIK 185

Query: 106 NSPICAKFGAGGSVEFNNMTKPY---VCEAETPGHYTLVXXXXXXXXXXXXXXXXQSQSK 162
             P+C  F   G +    +TKP    VC A+T GH+ LV                Q Q  
Sbjct: 186 VKPLCVSFEGNGKMTL-AITKPLATNVCVAKTHGHFGLV----------VESESLQHQDD 234

Query: 163 GFN-----TWWVLGFVIGSXXXXXXXXXXXXXXKEA------KRRRIRKMEKISEGGEPF 211
            +      + W +   +GS                A      KR R+ +ME+ +   E  
Sbjct: 235 EYKKPIRLSQWKIA--VGSTIGAALGAFLLGLLFVAMVVRVKKRSRMVQMERRAYEEEAL 292

Query: 212 DTFWIGDTKLPLAPMIRTQPVLENDDAVS 240
               +G  + P AP  RT P LE  D ++
Sbjct: 293 QVSMVGHVRAPTAPGTRTTPTLEQHDYIT 321