Miyakogusa Predicted Gene

Lj3g3v2364180.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2364180.1 Non Characterized Hit- tr|E1ZIF6|E1ZIF6_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,44.83,0.000000001,seg,NULL,CUFF.43936.1
         (247 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g023960.2 | copper ion-binding protein | HC | chr8:8756492...   278   4e-75
Medtr8g023960.1 | copper ion-binding protein | HC | chr8:8756338...   277   7e-75

>Medtr8g023960.2 | copper ion-binding protein | HC |
           chr8:8756492-8753979 | 20130731
          Length = 296

 Score =  278 bits (711), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 159/248 (64%), Positives = 179/248 (72%), Gaps = 9/248 (3%)

Query: 1   MLRLAKLKPFLHSTQSPCSGQQLIQRCSVSGTXXXXXXXXXXXLKRSRITTKKXXXXXXX 60
           MLRL KLKP    + SP    QL+QRCSVS T           LKRS+IT KK       
Sbjct: 57  MLRLTKLKP---PSSSP---HQLLQRCSVSRTAKGKGKAGQI-LKRSKITVKKSGPEPTP 109

Query: 61  XX-XXXXXXXXXXXXXXXXXNAPTPVRYLTPKQKKREAEREKMGLISKERQRELDMMKKK 119
                               NAPTP+R+L PKQ+ REAEREK+GLISK+RQ ELDMMKKK
Sbjct: 110 GAPTGSREKQERERLYDQCLNAPTPLRFLKPKQRAREAEREKLGLISKDRQIELDMMKKK 169

Query: 120 VFNKYKVPEKPTIIGTPGLDYVTLGLVDVEKLPKYELTVEDGRRLAKEYGRVLMRKSRAR 179
              K++V EKPTI+GTPGLDY+TLGLVD EKLPKYELT EDG +LAKEY RVLMRK RAR
Sbjct: 170 N-AKFRVFEKPTIMGTPGLDYITLGLVDAEKLPKYELTKEDGMKLAKEYSRVLMRKHRAR 228

Query: 180 QAAETNLLRMKKEAIEALPPHLKEAALVPDLAPFPANRFMATLTPPIPGYIDKIREAANK 239
           QAAETNLLRMKK+AIEALP  LKE ALVPDL PFP N FMATLTPPI GYI++I+EAA++
Sbjct: 229 QAAETNLLRMKKKAIEALPGGLKETALVPDLTPFPMNMFMATLTPPIDGYIEEIKEAADR 288

Query: 240 ISGREKIR 247
           ISG+EKIR
Sbjct: 289 ISGKEKIR 296


>Medtr8g023960.1 | copper ion-binding protein | HC |
           chr8:8756338-8755311 | 20130731
          Length = 240

 Score =  277 bits (708), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 159/248 (64%), Positives = 179/248 (72%), Gaps = 9/248 (3%)

Query: 1   MLRLAKLKPFLHSTQSPCSGQQLIQRCSVSGTXXXXXXXXXXXLKRSRITTKKXXXXXXX 60
           MLRL KLKP    + SP    QL+QRCSVS T           LKRS+IT KK       
Sbjct: 1   MLRLTKLKP---PSSSP---HQLLQRCSVSRTAKGKGKAGQI-LKRSKITVKKSGPEPTP 53

Query: 61  XX-XXXXXXXXXXXXXXXXXNAPTPVRYLTPKQKKREAEREKMGLISKERQRELDMMKKK 119
                               NAPTP+R+L PKQ+ REAEREK+GLISK+RQ ELDMMKKK
Sbjct: 54  GAPTGSREKQERERLYDQCLNAPTPLRFLKPKQRAREAEREKLGLISKDRQIELDMMKKK 113

Query: 120 VFNKYKVPEKPTIIGTPGLDYVTLGLVDVEKLPKYELTVEDGRRLAKEYGRVLMRKSRAR 179
              K++V EKPTI+GTPGLDY+TLGLVD EKLPKYELT EDG +LAKEY RVLMRK RAR
Sbjct: 114 -NAKFRVFEKPTIMGTPGLDYITLGLVDAEKLPKYELTKEDGMKLAKEYSRVLMRKHRAR 172

Query: 180 QAAETNLLRMKKEAIEALPPHLKEAALVPDLAPFPANRFMATLTPPIPGYIDKIREAANK 239
           QAAETNLLRMKK+AIEALP  LKE ALVPDL PFP N FMATLTPPI GYI++I+EAA++
Sbjct: 173 QAAETNLLRMKKKAIEALPGGLKETALVPDLTPFPMNMFMATLTPPIDGYIEEIKEAADR 232

Query: 240 ISGREKIR 247
           ISG+EKIR
Sbjct: 233 ISGKEKIR 240