Miyakogusa Predicted Gene

Lj3g3v2364160.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2364160.1 tr|A9TNF0|A9TNF0_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_171041,30.25,1e-18,BACK,BTB/Kelch-associated;
BTB,BTB/POZ; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; BTB And
C-t,CUFF.43935.1
         (382 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g028190.2 | BTB/POZ domain protein POB1 | HC | chr8:105286...   619   e-177
Medtr8g028190.1 | BTB/POZ domain protein POB1 | HC | chr8:105286...   618   e-177
Medtr8g028190.3 | BTB/POZ domain protein POB1 | HC | chr8:105286...   618   e-177
Medtr4g088460.1 | BTB/POZ domain protein | LC | chr4:35082007-35...   129   7e-30

>Medtr8g028190.2 | BTB/POZ domain protein POB1 | HC |
           chr8:10528628-10524338 | 20130731
          Length = 591

 Score =  619 bits (1596), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 297/381 (77%), Positives = 334/381 (87%), Gaps = 1/381 (0%)

Query: 1   MRESKERHVTLRINASEEDALMDLLNFMYSNTLKATAPSALLDVLMAADKFEVASCMRHC 60
           MRES+ RHVTLRINASEE ALM+LLNFMYSNTL       LLDVLMAADKFEVASCMR+C
Sbjct: 212 MRESELRHVTLRINASEEAALMELLNFMYSNTLSIKTAPGLLDVLMAADKFEVASCMRYC 271

Query: 61  SRLLRNLPMTPESALLYLDLPHTILMADAVQPLTDAAKQYLADRYKDITKFQEEVMALPL 120
           SRLLRN+ MTPESALLYL+LP ++LMADAVQPLTDAAKQYLA RYKDITKFQEEVM LPL
Sbjct: 272 SRLLRNMQMTPESALLYLELPSSVLMADAVQPLTDAAKQYLASRYKDITKFQEEVMNLPL 331

Query: 121 SGIEAILASDDLQVASEDIVFDFVLKWAKQHYNRLEERREVLATRLAPLIRFPCMSCRKL 180
           +G+EAIL+SDDLQVASED V+DFVLKWA+  Y  LEERREVL  RLA  IRFP M+CRKL
Sbjct: 332 AGVEAILSSDDLQVASEDAVYDFVLKWARHQYGNLEERREVLGLRLARFIRFPHMTCRKL 391

Query: 181 KKVLNCNDFQQEGACNKLVLEAVFYKAETPHRQRLLAAEETSSLNRCFVERAYKYRPVKV 240
           KKVL C+DF+ +   +KLVLEA+F+KAE PHRQR LAAEE +  +R F+ERAYKYRPVKV
Sbjct: 392 KKVLTCSDFEHD-VSSKLVLEALFFKAEVPHRQRSLAAEEPACSSRRFLERAYKYRPVKV 450

Query: 241 VDFVLPQPQCVVYMDLKREECASLFPSGRMYSQAFHLGEQGFFLSAHCNMDQQNSFHCFG 300
           V+F LP+ QCVVY+DLKREEC++LFPSGR+YSQAFHLG QGFFLSAHCNMDQQ+SFHCFG
Sbjct: 451 VEFELPRQQCVVYLDLKREECSNLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFG 510

Query: 301 MFLGMQDKGSESFALDYEFAARCSPTNEFVSKYRGNYTFTGGKAVGYRNLFGIPWTSFIG 360
           +FLGMQ+KGS SF +DYEFAAR  PT EFVSKY+GNYTFTGGKAVGYRNLF IPWTSF+ 
Sbjct: 511 LFLGMQEKGSVSFTVDYEFAARSRPTEEFVSKYKGNYTFTGGKAVGYRNLFAIPWTSFMA 570

Query: 361 EDSIFFIKDVLYLRAELTIRQ 381
           ED ++FI  VL+LRAELTIRQ
Sbjct: 571 EDCLYFINGVLHLRAELTIRQ 591


>Medtr8g028190.1 | BTB/POZ domain protein POB1 | HC |
           chr8:10528673-10524289 | 20130731
          Length = 551

 Score =  618 bits (1594), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 297/381 (77%), Positives = 334/381 (87%), Gaps = 1/381 (0%)

Query: 1   MRESKERHVTLRINASEEDALMDLLNFMYSNTLKATAPSALLDVLMAADKFEVASCMRHC 60
           MRES+ RHVTLRINASEE ALM+LLNFMYSNTL       LLDVLMAADKFEVASCMR+C
Sbjct: 172 MRESELRHVTLRINASEEAALMELLNFMYSNTLSIKTAPGLLDVLMAADKFEVASCMRYC 231

Query: 61  SRLLRNLPMTPESALLYLDLPHTILMADAVQPLTDAAKQYLADRYKDITKFQEEVMALPL 120
           SRLLRN+ MTPESALLYL+LP ++LMADAVQPLTDAAKQYLA RYKDITKFQEEVM LPL
Sbjct: 232 SRLLRNMQMTPESALLYLELPSSVLMADAVQPLTDAAKQYLASRYKDITKFQEEVMNLPL 291

Query: 121 SGIEAILASDDLQVASEDIVFDFVLKWAKQHYNRLEERREVLATRLAPLIRFPCMSCRKL 180
           +G+EAIL+SDDLQVASED V+DFVLKWA+  Y  LEERREVL  RLA  IRFP M+CRKL
Sbjct: 292 AGVEAILSSDDLQVASEDAVYDFVLKWARHQYGNLEERREVLGLRLARFIRFPHMTCRKL 351

Query: 181 KKVLNCNDFQQEGACNKLVLEAVFYKAETPHRQRLLAAEETSSLNRCFVERAYKYRPVKV 240
           KKVL C+DF+ +   +KLVLEA+F+KAE PHRQR LAAEE +  +R F+ERAYKYRPVKV
Sbjct: 352 KKVLTCSDFEHD-VSSKLVLEALFFKAEVPHRQRSLAAEEPACSSRRFLERAYKYRPVKV 410

Query: 241 VDFVLPQPQCVVYMDLKREECASLFPSGRMYSQAFHLGEQGFFLSAHCNMDQQNSFHCFG 300
           V+F LP+ QCVVY+DLKREEC++LFPSGR+YSQAFHLG QGFFLSAHCNMDQQ+SFHCFG
Sbjct: 411 VEFELPRQQCVVYLDLKREECSNLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFG 470

Query: 301 MFLGMQDKGSESFALDYEFAARCSPTNEFVSKYRGNYTFTGGKAVGYRNLFGIPWTSFIG 360
           +FLGMQ+KGS SF +DYEFAAR  PT EFVSKY+GNYTFTGGKAVGYRNLF IPWTSF+ 
Sbjct: 471 LFLGMQEKGSVSFTVDYEFAARSRPTEEFVSKYKGNYTFTGGKAVGYRNLFAIPWTSFMA 530

Query: 361 EDSIFFIKDVLYLRAELTIRQ 381
           ED ++FI  VL+LRAELTIRQ
Sbjct: 531 EDCLYFINGVLHLRAELTIRQ 551


>Medtr8g028190.3 | BTB/POZ domain protein POB1 | HC |
           chr8:10528673-10524338 | 20130731
          Length = 559

 Score =  618 bits (1594), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 297/381 (77%), Positives = 334/381 (87%), Gaps = 1/381 (0%)

Query: 1   MRESKERHVTLRINASEEDALMDLLNFMYSNTLKATAPSALLDVLMAADKFEVASCMRHC 60
           MRES+ RHVTLRINASEE ALM+LLNFMYSNTL       LLDVLMAADKFEVASCMR+C
Sbjct: 180 MRESELRHVTLRINASEEAALMELLNFMYSNTLSIKTAPGLLDVLMAADKFEVASCMRYC 239

Query: 61  SRLLRNLPMTPESALLYLDLPHTILMADAVQPLTDAAKQYLADRYKDITKFQEEVMALPL 120
           SRLLRN+ MTPESALLYL+LP ++LMADAVQPLTDAAKQYLA RYKDITKFQEEVM LPL
Sbjct: 240 SRLLRNMQMTPESALLYLELPSSVLMADAVQPLTDAAKQYLASRYKDITKFQEEVMNLPL 299

Query: 121 SGIEAILASDDLQVASEDIVFDFVLKWAKQHYNRLEERREVLATRLAPLIRFPCMSCRKL 180
           +G+EAIL+SDDLQVASED V+DFVLKWA+  Y  LEERREVL  RLA  IRFP M+CRKL
Sbjct: 300 AGVEAILSSDDLQVASEDAVYDFVLKWARHQYGNLEERREVLGLRLARFIRFPHMTCRKL 359

Query: 181 KKVLNCNDFQQEGACNKLVLEAVFYKAETPHRQRLLAAEETSSLNRCFVERAYKYRPVKV 240
           KKVL C+DF+ +   +KLVLEA+F+KAE PHRQR LAAEE +  +R F+ERAYKYRPVKV
Sbjct: 360 KKVLTCSDFEHD-VSSKLVLEALFFKAEVPHRQRSLAAEEPACSSRRFLERAYKYRPVKV 418

Query: 241 VDFVLPQPQCVVYMDLKREECASLFPSGRMYSQAFHLGEQGFFLSAHCNMDQQNSFHCFG 300
           V+F LP+ QCVVY+DLKREEC++LFPSGR+YSQAFHLG QGFFLSAHCNMDQQ+SFHCFG
Sbjct: 419 VEFELPRQQCVVYLDLKREECSNLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFG 478

Query: 301 MFLGMQDKGSESFALDYEFAARCSPTNEFVSKYRGNYTFTGGKAVGYRNLFGIPWTSFIG 360
           +FLGMQ+KGS SF +DYEFAAR  PT EFVSKY+GNYTFTGGKAVGYRNLF IPWTSF+ 
Sbjct: 479 LFLGMQEKGSVSFTVDYEFAARSRPTEEFVSKYKGNYTFTGGKAVGYRNLFAIPWTSFMA 538

Query: 361 EDSIFFIKDVLYLRAELTIRQ 381
           ED ++FI  VL+LRAELTIRQ
Sbjct: 539 EDCLYFINGVLHLRAELTIRQ 559


>Medtr4g088460.1 | BTB/POZ domain protein | LC |
           chr4:35082007-35083494 | 20130731
          Length = 362

 Score =  129 bits (323), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 64/126 (50%), Positives = 76/126 (60%), Gaps = 26/126 (20%)

Query: 231 RAYKYRPVKVVDFVLPQPQCVVYMDLKREECASLFPSGRMYSQAFHLGEQGFFLSAHCNM 290
           R+Y YR VKV+ F  P  QC+VY+DLKREECASLFP G++Y Q FHLG            
Sbjct: 205 RSYLYRHVKVMKFESPCQQCIVYLDLKREECASLFPYGKVYFQIFHLG------------ 252

Query: 291 DQQNSFHCFGMFLGMQDKGSESFALDYEFAARCSPTNEFVSKYRGNYTFTGGKAVGYRNL 350
                         MQ+KGS S A+DYEFAAR  P  +F +KY+G YTFT    +GY NL
Sbjct: 253 --------------MQEKGSVSLAVDYEFAARSKPAKKFFTKYKGKYTFTREMTIGYGNL 298

Query: 351 FGIPWT 356
           F IPWT
Sbjct: 299 FTIPWT 304



 Score =  122 bits (307), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 60/98 (61%), Positives = 74/98 (75%)

Query: 1   MRESKERHVTLRINASEEDALMDLLNFMYSNTLKATAPSALLDVLMAADKFEVASCMRHC 60
           MRES + HVTLRI ASEE  ++ LL FM +N L  T+P   L+VL+AADKFEVASC+RHC
Sbjct: 85  MRESDQTHVTLRITASEEAPVIALLKFMNTNILNVTSPLVFLEVLVAADKFEVASCLRHC 144

Query: 61  SRLLRNLPMTPESALLYLDLPHTILMADAVQPLTDAAK 98
           ++LL ++ MT E  L YLDLP ++LM D VQPLTDA K
Sbjct: 145 NQLLLSISMTLEFVLPYLDLPSSVLMDDGVQPLTDAKK 182