Miyakogusa Predicted Gene
- Lj3g3v2341090.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2341090.1 tr|G7LBQ1|G7LBQ1_MEDTR ATP-dependent helicase BRM
OS=Medicago truncatula GN=MTR_8g030550 PE=4 SV=1,80.2,0,seg,NULL;
SNF2_N,SNF2-related; P-loop containing nucleoside triphosphate
hydrolases,NULL; coiled-coi,CUFF.43952.1
(1050 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g030550.3 | ATP-dependent helicase BRM | HC | chr8:1127948... 1419 0.0
Medtr8g030550.2 | ATP-dependent helicase BRM | HC | chr8:1127948... 1418 0.0
Medtr8g030550.1 | ATP-dependent helicase BRM | HC | chr8:1127948... 1417 0.0
Medtr7g078090.1 | ATP-dependent helicase BRM | HC | chr7:2951348... 1190 0.0
Medtr4g118720.1 | SNF2 family amine-terminal protein | HC | chr4... 124 6e-28
Medtr1g105050.1 | chromatin remodeling factor, putative | HC | c... 87 1e-16
Medtr5g005840.1 | chromatin remodeling factor, putative | HC | c... 86 2e-16
Medtr2g020000.1 | chromatin remodeling factor, putative | HC | c... 70 2e-11
Medtr4g118845.1 | chromatin remodeling factor, putative | HC | c... 69 2e-11
Medtr7g090960.2 | DNA helicase INO80-like protein | HC | chr7:35... 67 1e-10
Medtr7g090960.1 | DNA helicase INO80-like protein | HC | chr7:35... 67 1e-10
Medtr1g053955.1 | helicase | HC | chr1:22924323-22942659 | 20130731 63 1e-09
Medtr5g020000.1 | chromatin-remodeling complex ATPase chain, put... 63 2e-09
Medtr4g118845.2 | chromatin remodeling factor, putative | HC | c... 63 2e-09
Medtr3g053910.1 | chromodomain helicase DNA-binding protein, put... 60 1e-08
Medtr3g053910.3 | chromodomain helicase DNA-binding protein, put... 60 1e-08
Medtr3g053910.4 | chromodomain helicase DNA-binding protein, put... 60 1e-08
Medtr3g053910.2 | chromodomain helicase DNA-binding protein, put... 60 1e-08
Medtr5g090090.1 | chromodomain helicase-DNA-binding protein | HC... 59 2e-08
Medtr5g090090.2 | chromodomain helicase-DNA-binding protein | HC... 59 2e-08
Medtr4g096930.1 | chromatin remodeling complex subunit | HC | ch... 53 2e-06
>Medtr8g030550.3 | ATP-dependent helicase BRM | HC |
chr8:11279486-11269047 | 20130731
Length = 2026
Score = 1419 bits (3674), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 736/985 (74%), Positives = 791/985 (80%), Gaps = 38/985 (3%)
Query: 73 LLRKPEGSEAFFNHQAGRQGVFGSNNFSSPTPSAMQQPQQSRKFTDLPQHGSNQGNHVRG 132
LLRKPEG+EAF +QAGRQGVFGSNNF P +AMQ PQQS KF +L QHGSNQ +RG
Sbjct: 68 LLRKPEGNEAFLAYQAGRQGVFGSNNFQQP--NAMQLPQQSGKFVNLAQHGSNQDGQLRG 125
Query: 133 QGSEQQ-MLNPVQQAYLQYAFQAVQQN-PSLGIHSQQQTKMGMLSPANLKDQEMRMGNLK 190
QGSEQQ M+NPVQQAYLQYAFQA QQ P+LGIHSQQQ KMGML+PA++KDQEMRMGNLK
Sbjct: 126 QGSEQQQMINPVQQAYLQYAFQAAQQKQPALGIHSQQQAKMGMLNPASVKDQEMRMGNLK 185
Query: 191 MQDVMSMQAVNQAQGSSSRNSSEHVARGERQMEQGQQVTPDQKNEGNLSTPGPARHLIPG 250
MQ+ MSMQAVNQAQGSSSRNSSEH ARGE+QMEQGQQ+
Sbjct: 186 MQEAMSMQAVNQAQGSSSRNSSEHNARGEKQMEQGQQI---------------------- 223
Query: 251 NMTRPTQAPDPQQGN-QTVANTQIAVASQLQAVQAWARERNIDLSHPANAHFMAQIIPLM 309
RP QAP+ QQG+ Q V NTQIAVA QLQ +QAWARE NIDLSHP NA+ MA++IP+M
Sbjct: 224 ---RPIQAPEAQQGSVQNVMNTQIAVAHQLQMMQAWARENNIDLSHPTNANLMAKLIPMM 280
Query: 310 QSRMVAQPKVSESNIGAQSSPVPVSKQLVNSPXXXXXXXXXXXXXXXXXXXXXXXKARQT 369
QSRMV PK ESN+GAQSSPVPVSKQ VNSP KAR T
Sbjct: 281 QSRMVLPPKAGESNVGAQSSPVPVSKQQVNSPAVASESSAHANSSSDVSGQSGSSKARHT 340
Query: 370 VQPSHLSATANAGIAGNSRDLAMQQFNVHGRESQASLR---LVGNTMPSMHSQQSSSDLN 426
V PSHL T NAG +S D+AMQQFN+HGRESQA LR GN MPSMHSQQSS+ +N
Sbjct: 341 VPPSHLGPTTNAG---HSSDMAMQQFNIHGRESQAPLRQQVKAGNGMPSMHSQQSSAAMN 397
Query: 427 LGA-DPPLNAKTSTSGPEPPQMQYIRQLNESTPQAGGPTNEGGSGNYAKSQGAPIQMPEQ 485
LGA D LN K +S EPPQMQYIRQLN+ST QAGGPT EGGS N AKSQ P QMPE+
Sbjct: 398 LGAADHSLNVKGLSSSAEPPQMQYIRQLNQSTAQAGGPTKEGGSRNNAKSQVPPAQMPER 457
Query: 486 RGGFTKPQLHVLKAQILAFRRLKKGEGTLPQELLRAIAPPPLEVQAQHPNHPAGGQNQDK 545
+ FTK QLHVLKAQILAFRR+KKGEG LP ELL+AI PPPLEVQA+ PN PAGGQNQ +
Sbjct: 458 QSAFTKQQLHVLKAQILAFRRIKKGEGMLPPELLQAITPPPLEVQAEQPNQPAGGQNQVR 517
Query: 546 SAGNIMAEQPRHAESNAKDSQSIPAVNGHSSLKQELFVKEKKSTLPPVHAQSVMPSVSKE 605
SAG+I AEQPRH E+NAK+S+SIPAVNGHSS+KQE F +E+KS PPVH Q+VMPS+SKE
Sbjct: 518 SAGHIAAEQPRHVEANAKESKSIPAVNGHSSVKQESFSREEKSAPPPVHIQAVMPSMSKE 577
Query: 606 PASALSSGKEEQQPTGCSFKSNQDSEHGNNSTPVRNELALDRGKAIAPLASVSDTMQITK 665
AS S+GKEEQ+ G SFK QDSEHGNNSTPVRNE ALDRGKAIAP ASVSDTMQITK
Sbjct: 578 SASTSSAGKEEQKTIGSSFKPKQDSEHGNNSTPVRNESALDRGKAIAPQASVSDTMQITK 637
Query: 666 TAQASTVSQPKDGGSTRKYHGPLFDFPSFTRKPDSFGSSTMV-NNNNLSLAYDVKDLLLE 724
AQA+TVSQPKD G RKYHGPLFDFP FTRK DSFGSS MV NNNNLSLAYDVKDLL E
Sbjct: 638 PAQATTVSQPKDVGPARKYHGPLFDFPFFTRKHDSFGSSMMVNNNNNLSLAYDVKDLLSE 697
Query: 725 EGMEVLNKKRTENLKKIEGLLAVNIERKRIRPDLVLKLQIEEKKXXXXXXXXXXXXXXXX 784
EG EVLNKKRTENLKKIEGLLAVN+ERKRIRPDLVL+LQIEEKK
Sbjct: 698 EGAEVLNKKRTENLKKIEGLLAVNLERKRIRPDLVLRLQIEEKKLRLLDVQARLRDEIDQ 757
Query: 785 XXXEIMAMPDRPYRKFVRLCERQRMELARQVQASRRALREKQLKSIFLWRKKLLEAHWAI 844
EIMAMPDRPYRKFVRLCERQRMEL RQVQAS++A REKQLKSIFLWRKKLLEAHWAI
Sbjct: 758 QQQEIMAMPDRPYRKFVRLCERQRMELVRQVQASQKAAREKQLKSIFLWRKKLLEAHWAI 817
Query: 845 RDARTARNRGVAKYHERMLREFSKHKDDDRHKRMEALKNNDVDRYREMLLEQQSSIPGEA 904
RDARTARNRGV KYHERMLREFSKHKDDDR KR+EALKNNDVDRYREMLLEQQ+SIPG+A
Sbjct: 818 RDARTARNRGVGKYHERMLREFSKHKDDDRSKRLEALKNNDVDRYREMLLEQQTSIPGDA 877
Query: 905 SERYAVLSSFLSQTEEYLHKLGSKITXXXXXXXXXXXXXXXXXXXRLQGLSEEEVRAAAA 964
+ERY VLSSFLSQTEEYLHKLGSKIT RLQGLSEEEVRAAAA
Sbjct: 878 AERYTVLSSFLSQTEEYLHKLGSKITAAKNQQEVEEAAKAAADAARLQGLSEEEVRAAAA 937
Query: 965 CAGEEVMIRNRFLEMNAPRDSSSVNKYYNLAHAVNEVVIRQPSLLRAGTLRDYQLVGLQW 1024
CAGEEVMIRNRFLEMNAPRDSSSVNKYYNLAHAVNE+VIRQPSLLRAGTLRDYQLVGLQW
Sbjct: 938 CAGEEVMIRNRFLEMNAPRDSSSVNKYYNLAHAVNEMVIRQPSLLRAGTLRDYQLVGLQW 997
Query: 1025 MLSLYNNKLNGILADEMGLGKTVQV 1049
MLSLYNNKLNGILADEMGLGKTVQV
Sbjct: 998 MLSLYNNKLNGILADEMGLGKTVQV 1022
>Medtr8g030550.2 | ATP-dependent helicase BRM | HC |
chr8:11279486-11267681 | 20130731
Length = 1745
Score = 1418 bits (3671), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 736/985 (74%), Positives = 791/985 (80%), Gaps = 38/985 (3%)
Query: 73 LLRKPEGSEAFFNHQAGRQGVFGSNNFSSPTPSAMQQPQQSRKFTDLPQHGSNQGNHVRG 132
LLRKPEG+EAF +QAGRQGVFGSNNF P +AMQ PQQS KF +L QHGSNQ +RG
Sbjct: 68 LLRKPEGNEAFLAYQAGRQGVFGSNNFQQP--NAMQLPQQSGKFVNLAQHGSNQDGQLRG 125
Query: 133 QGSEQQ-MLNPVQQAYLQYAFQAVQQN-PSLGIHSQQQTKMGMLSPANLKDQEMRMGNLK 190
QGSEQQ M+NPVQQAYLQYAFQA QQ P+LGIHSQQQ KMGML+PA++KDQEMRMGNLK
Sbjct: 126 QGSEQQQMINPVQQAYLQYAFQAAQQKQPALGIHSQQQAKMGMLNPASVKDQEMRMGNLK 185
Query: 191 MQDVMSMQAVNQAQGSSSRNSSEHVARGERQMEQGQQVTPDQKNEGNLSTPGPARHLIPG 250
MQ+ MSMQAVNQAQGSSSRNSSEH ARGE+QMEQGQQ+
Sbjct: 186 MQEAMSMQAVNQAQGSSSRNSSEHNARGEKQMEQGQQI---------------------- 223
Query: 251 NMTRPTQAPDPQQGN-QTVANTQIAVASQLQAVQAWARERNIDLSHPANAHFMAQIIPLM 309
RP QAP+ QQG+ Q V NTQIAVA QLQ +QAWARE NIDLSHP NA+ MA++IP+M
Sbjct: 224 ---RPIQAPEAQQGSVQNVMNTQIAVAHQLQMMQAWARENNIDLSHPTNANLMAKLIPMM 280
Query: 310 QSRMVAQPKVSESNIGAQSSPVPVSKQLVNSPXXXXXXXXXXXXXXXXXXXXXXXKARQT 369
QSRMV PK ESN+GAQSSPVPVSKQ VNSP KAR T
Sbjct: 281 QSRMVLPPKAGESNVGAQSSPVPVSKQQVNSPAVASESSAHANSSSDVSGQSGSSKARHT 340
Query: 370 VQPSHLSATANAGIAGNSRDLAMQQFNVHGRESQASLR---LVGNTMPSMHSQQSSSDLN 426
V PSHL T NAG +S D+AMQQFN+HGRESQA LR GN MPSMHSQQSS+ +N
Sbjct: 341 VPPSHLGPTTNAG---HSSDMAMQQFNIHGRESQAPLRQQVKAGNGMPSMHSQQSSAAMN 397
Query: 427 LGA-DPPLNAKTSTSGPEPPQMQYIRQLNESTPQAGGPTNEGGSGNYAKSQGAPIQMPEQ 485
LGA D LN K +S EPPQMQYIRQLN+ST QAGGPT EGGS N AKSQ P QMPE+
Sbjct: 398 LGAADHSLNVKGLSSSAEPPQMQYIRQLNQSTAQAGGPTKEGGSRNNAKSQVPPAQMPER 457
Query: 486 RGGFTKPQLHVLKAQILAFRRLKKGEGTLPQELLRAIAPPPLEVQAQHPNHPAGGQNQDK 545
+ FTK QLHVLKAQILAFRR+KKGEG LP ELL+AI PPPLEVQA+ PN PAGGQNQ +
Sbjct: 458 QSAFTKQQLHVLKAQILAFRRIKKGEGMLPPELLQAITPPPLEVQAEQPNQPAGGQNQVR 517
Query: 546 SAGNIMAEQPRHAESNAKDSQSIPAVNGHSSLKQELFVKEKKSTLPPVHAQSVMPSVSKE 605
SAG+I AEQPRH E+NAK+S+SIPAVNGHSS+KQE F +E+KS PPVH Q+VMPS+SKE
Sbjct: 518 SAGHIAAEQPRHVEANAKESKSIPAVNGHSSVKQESFSREEKSAPPPVHIQAVMPSMSKE 577
Query: 606 PASALSSGKEEQQPTGCSFKSNQDSEHGNNSTPVRNELALDRGKAIAPLASVSDTMQITK 665
AS S+GKEEQ+ G SFK QDSEHGNNSTPVRNE ALDRGKAIAP ASVSDTMQITK
Sbjct: 578 SASTSSAGKEEQKTIGSSFKPKQDSEHGNNSTPVRNESALDRGKAIAPQASVSDTMQITK 637
Query: 666 TAQASTVSQPKDGGSTRKYHGPLFDFPSFTRKPDSFGSSTMV-NNNNLSLAYDVKDLLLE 724
AQA+TVSQPKD G RKYHGPLFDFP FTRK DSFGSS MV NNNNLSLAYDVKDLL E
Sbjct: 638 PAQATTVSQPKDVGPARKYHGPLFDFPFFTRKHDSFGSSMMVNNNNNLSLAYDVKDLLSE 697
Query: 725 EGMEVLNKKRTENLKKIEGLLAVNIERKRIRPDLVLKLQIEEKKXXXXXXXXXXXXXXXX 784
EG EVLNKKRTENLKKIEGLLAVN+ERKRIRPDLVL+LQIEEKK
Sbjct: 698 EGAEVLNKKRTENLKKIEGLLAVNLERKRIRPDLVLRLQIEEKKLRLLDVQARLRDEIDQ 757
Query: 785 XXXEIMAMPDRPYRKFVRLCERQRMELARQVQASRRALREKQLKSIFLWRKKLLEAHWAI 844
EIMAMPDRPYRKFVRLCERQRMEL RQVQAS++A REKQLKSIFLWRKKLLEAHWAI
Sbjct: 758 QQQEIMAMPDRPYRKFVRLCERQRMELVRQVQASQKAAREKQLKSIFLWRKKLLEAHWAI 817
Query: 845 RDARTARNRGVAKYHERMLREFSKHKDDDRHKRMEALKNNDVDRYREMLLEQQSSIPGEA 904
RDARTARNRGV KYHERMLREFSKHKDDDR KR+EALKNNDVDRYREMLLEQQ+SIPG+A
Sbjct: 818 RDARTARNRGVGKYHERMLREFSKHKDDDRSKRLEALKNNDVDRYREMLLEQQTSIPGDA 877
Query: 905 SERYAVLSSFLSQTEEYLHKLGSKITXXXXXXXXXXXXXXXXXXXRLQGLSEEEVRAAAA 964
+ERY VLSSFLSQTEEYLHKLGSKIT RLQGLSEEEVRAAAA
Sbjct: 878 AERYTVLSSFLSQTEEYLHKLGSKITAAKNQQEVEEAAKAAADAARLQGLSEEEVRAAAA 937
Query: 965 CAGEEVMIRNRFLEMNAPRDSSSVNKYYNLAHAVNEVVIRQPSLLRAGTLRDYQLVGLQW 1024
CAGEEVMIRNRFLEMNAPRDSSSVNKYYNLAHAVNE+VIRQPSLLRAGTLRDYQLVGLQW
Sbjct: 938 CAGEEVMIRNRFLEMNAPRDSSSVNKYYNLAHAVNEMVIRQPSLLRAGTLRDYQLVGLQW 997
Query: 1025 MLSLYNNKLNGILADEMGLGKTVQV 1049
MLSLYNNKLNGILADEMGLGKTVQV
Sbjct: 998 MLSLYNNKLNGILADEMGLGKTVQV 1022
>Medtr8g030550.1 | ATP-dependent helicase BRM | HC |
chr8:11279486-11267681 | 20130731
Length = 2208
Score = 1417 bits (3668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 736/985 (74%), Positives = 791/985 (80%), Gaps = 38/985 (3%)
Query: 73 LLRKPEGSEAFFNHQAGRQGVFGSNNFSSPTPSAMQQPQQSRKFTDLPQHGSNQGNHVRG 132
LLRKPEG+EAF +QAGRQGVFGSNNF P +AMQ PQQS KF +L QHGSNQ +RG
Sbjct: 68 LLRKPEGNEAFLAYQAGRQGVFGSNNFQQP--NAMQLPQQSGKFVNLAQHGSNQDGQLRG 125
Query: 133 QGSEQQ-MLNPVQQAYLQYAFQAVQQN-PSLGIHSQQQTKMGMLSPANLKDQEMRMGNLK 190
QGSEQQ M+NPVQQAYLQYAFQA QQ P+LGIHSQQQ KMGML+PA++KDQEMRMGNLK
Sbjct: 126 QGSEQQQMINPVQQAYLQYAFQAAQQKQPALGIHSQQQAKMGMLNPASVKDQEMRMGNLK 185
Query: 191 MQDVMSMQAVNQAQGSSSRNSSEHVARGERQMEQGQQVTPDQKNEGNLSTPGPARHLIPG 250
MQ+ MSMQAVNQAQGSSSRNSSEH ARGE+QMEQGQQ+
Sbjct: 186 MQEAMSMQAVNQAQGSSSRNSSEHNARGEKQMEQGQQI---------------------- 223
Query: 251 NMTRPTQAPDPQQGN-QTVANTQIAVASQLQAVQAWARERNIDLSHPANAHFMAQIIPLM 309
RP QAP+ QQG+ Q V NTQIAVA QLQ +QAWARE NIDLSHP NA+ MA++IP+M
Sbjct: 224 ---RPIQAPEAQQGSVQNVMNTQIAVAHQLQMMQAWARENNIDLSHPTNANLMAKLIPMM 280
Query: 310 QSRMVAQPKVSESNIGAQSSPVPVSKQLVNSPXXXXXXXXXXXXXXXXXXXXXXXKARQT 369
QSRMV PK ESN+GAQSSPVPVSKQ VNSP KAR T
Sbjct: 281 QSRMVLPPKAGESNVGAQSSPVPVSKQQVNSPAVASESSAHANSSSDVSGQSGSSKARHT 340
Query: 370 VQPSHLSATANAGIAGNSRDLAMQQFNVHGRESQASLR---LVGNTMPSMHSQQSSSDLN 426
V PSHL T NAG +S D+AMQQFN+HGRESQA LR GN MPSMHSQQSS+ +N
Sbjct: 341 VPPSHLGPTTNAG---HSSDMAMQQFNIHGRESQAPLRQQVKAGNGMPSMHSQQSSAAMN 397
Query: 427 LGA-DPPLNAKTSTSGPEPPQMQYIRQLNESTPQAGGPTNEGGSGNYAKSQGAPIQMPEQ 485
LGA D LN K +S EPPQMQYIRQLN+ST QAGGPT EGGS N AKSQ P QMPE+
Sbjct: 398 LGAADHSLNVKGLSSSAEPPQMQYIRQLNQSTAQAGGPTKEGGSRNNAKSQVPPAQMPER 457
Query: 486 RGGFTKPQLHVLKAQILAFRRLKKGEGTLPQELLRAIAPPPLEVQAQHPNHPAGGQNQDK 545
+ FTK QLHVLKAQILAFRR+KKGEG LP ELL+AI PPPLEVQA+ PN PAGGQNQ +
Sbjct: 458 QSAFTKQQLHVLKAQILAFRRIKKGEGMLPPELLQAITPPPLEVQAEQPNQPAGGQNQVR 517
Query: 546 SAGNIMAEQPRHAESNAKDSQSIPAVNGHSSLKQELFVKEKKSTLPPVHAQSVMPSVSKE 605
SAG+I AEQPRH E+NAK+S+SIPAVNGHSS+KQE F +E+KS PPVH Q+VMPS+SKE
Sbjct: 518 SAGHIAAEQPRHVEANAKESKSIPAVNGHSSVKQESFSREEKSAPPPVHIQAVMPSMSKE 577
Query: 606 PASALSSGKEEQQPTGCSFKSNQDSEHGNNSTPVRNELALDRGKAIAPLASVSDTMQITK 665
AS S+GKEEQ+ G SFK QDSEHGNNSTPVRNE ALDRGKAIAP ASVSDTMQITK
Sbjct: 578 SASTSSAGKEEQKTIGSSFKPKQDSEHGNNSTPVRNESALDRGKAIAPQASVSDTMQITK 637
Query: 666 TAQASTVSQPKDGGSTRKYHGPLFDFPSFTRKPDSFGSSTMV-NNNNLSLAYDVKDLLLE 724
AQA+TVSQPKD G RKYHGPLFDFP FTRK DSFGSS MV NNNNLSLAYDVKDLL E
Sbjct: 638 PAQATTVSQPKDVGPARKYHGPLFDFPFFTRKHDSFGSSMMVNNNNNLSLAYDVKDLLSE 697
Query: 725 EGMEVLNKKRTENLKKIEGLLAVNIERKRIRPDLVLKLQIEEKKXXXXXXXXXXXXXXXX 784
EG EVLNKKRTENLKKIEGLLAVN+ERKRIRPDLVL+LQIEEKK
Sbjct: 698 EGAEVLNKKRTENLKKIEGLLAVNLERKRIRPDLVLRLQIEEKKLRLLDVQARLRDEIDQ 757
Query: 785 XXXEIMAMPDRPYRKFVRLCERQRMELARQVQASRRALREKQLKSIFLWRKKLLEAHWAI 844
EIMAMPDRPYRKFVRLCERQRMEL RQVQAS++A REKQLKSIFLWRKKLLEAHWAI
Sbjct: 758 QQQEIMAMPDRPYRKFVRLCERQRMELVRQVQASQKAAREKQLKSIFLWRKKLLEAHWAI 817
Query: 845 RDARTARNRGVAKYHERMLREFSKHKDDDRHKRMEALKNNDVDRYREMLLEQQSSIPGEA 904
RDARTARNRGV KYHERMLREFSKHKDDDR KR+EALKNNDVDRYREMLLEQQ+SIPG+A
Sbjct: 818 RDARTARNRGVGKYHERMLREFSKHKDDDRSKRLEALKNNDVDRYREMLLEQQTSIPGDA 877
Query: 905 SERYAVLSSFLSQTEEYLHKLGSKITXXXXXXXXXXXXXXXXXXXRLQGLSEEEVRAAAA 964
+ERY VLSSFLSQTEEYLHKLGSKIT RLQGLSEEEVRAAAA
Sbjct: 878 AERYTVLSSFLSQTEEYLHKLGSKITAAKNQQEVEEAAKAAADAARLQGLSEEEVRAAAA 937
Query: 965 CAGEEVMIRNRFLEMNAPRDSSSVNKYYNLAHAVNEVVIRQPSLLRAGTLRDYQLVGLQW 1024
CAGEEVMIRNRFLEMNAPRDSSSVNKYYNLAHAVNE+VIRQPSLLRAGTLRDYQLVGLQW
Sbjct: 938 CAGEEVMIRNRFLEMNAPRDSSSVNKYYNLAHAVNEMVIRQPSLLRAGTLRDYQLVGLQW 997
Query: 1025 MLSLYNNKLNGILADEMGLGKTVQV 1049
MLSLYNNKLNGILADEMGLGKTVQV
Sbjct: 998 MLSLYNNKLNGILADEMGLGKTVQV 1022
>Medtr7g078090.1 | ATP-dependent helicase BRM | HC |
chr7:29513485-29525029 | 20130731
Length = 2224
Score = 1190 bits (3078), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 642/987 (65%), Positives = 737/987 (74%), Gaps = 29/987 (2%)
Query: 73 LLRKPEGSEAFFNHQAGRQGVFGSNNFSSPTPSAMQQPQQSRKFTDLPQHGSNQGNHVRG 132
LLRK EGSEA +QAG QG+FG+NN+SS T AMQ P QSR F L QHG NQG
Sbjct: 62 LLRKSEGSEAVLAYQAGHQGLFGNNNYSSST--AMQLPPQSRNFFALAQHGPNQG----- 114
Query: 133 QGSEQQMLNPVQQAYLQYAFQAVQQNPSLGIHSQQQTKMGMLSPANLKDQEMRMGNLKMQ 192
QG EQQ LNPV+QAY QYA Q+ QQ P+L + SQQQ KM ML P ++KDQEMRMGN K+Q
Sbjct: 115 QGIEQQRLNPVRQAYSQYALQSFQQRPALAMQSQQQPKMEMLGPTSVKDQEMRMGNFKLQ 174
Query: 193 DVMSMQAVNQAQGSSSRNSS-EHVARGERQMEQGQQVTPDQKNEGNLSTPGPA-RHLIPG 250
D+MSMQAVN QGSSS +S EH + GE+++EQGQQ+ D+KNEG ST G HL+PG
Sbjct: 175 DLMSMQAVNHGQGSSSSRNSSEHFSHGEKRVEQGQQLASDKKNEGKSSTQGLGIGHLMPG 234
Query: 251 NMTRPTQAPDPQQGNQTVANTQIAVASQLQAVQAWARERNIDLSHPANAHFMAQIIPLMQ 310
N RP QA QQ N QIA + QL+A+QAWA ERNIDLS PANA+F AQ+ LMQ
Sbjct: 235 NNIRPVQALPTQQSIPIAMNNQIATSDQLRAMQAWAHERNIDLSQPANANFAAQL-NLMQ 293
Query: 311 SRMVAQPKVSESNIGAQSSPVPVSKQLVNSPXXXXXXXXXXXXXXXXXXXXXXXKARQTV 370
+RMV Q K S GAQSS VPVSKQ SP KARQT
Sbjct: 294 TRMVQQSKES----GAQSSSVPVSKQQATSPAVSSEGSAHANSSTDVSALVGSVKARQTA 349
Query: 371 QPSHLSATANAGIAGNSRDLAMQQFNVHGRESQASLR--LVG-NTMPSMHSQQSSSDLNL 427
PSHL NAG+AGNS D A+QQF++HGR++Q SL+ +VG N MPSMH QQSS++ +L
Sbjct: 350 PPSHLGLPINAGVAGNSSDTAVQQFSLHGRDAQGSLKQLIVGVNGMPSMHPQQSSANKSL 409
Query: 428 GADPPLNAKTSTS--GPEPPQMQYIRQLNESTPQAGGPTNEGGSGNYAKSQGAPIQMPEQ 485
GAD LNAK S+S PEP +MQY+RQL++ GG T E GSGNYAK QG P QMP++
Sbjct: 410 GADSSLNAKASSSRSDPEPAKMQYVRQLSQHASLDGGSTKEVGSGNYAKPQGGPSQMPQK 469
Query: 486 RGGFTKPQLHVLKAQILAFRRLKKGEGTLPQELLRAIAPPPLEVQAQHPNHPAGGQNQDK 545
GFTK QLHVLKAQILAFRRLKKG+G LPQELL AI+PPPL++ Q P H AG QNQDK
Sbjct: 470 LNGFTKNQLHVLKAQILAFRRLKKGDGILPQELLEAISPPPLDLHVQQPIHSAGAQNQDK 529
Query: 546 SAGNIMAEQPRHAESNAKDSQSIPAVNGHSSLKQELFVKEKKSTLPPVHAQSVMPSVSKE 605
S GN + EQPR E AKDSQ I + +G+SS +QE FV+++KST VH Q+++P
Sbjct: 530 SMGNSVTEQPRQNEPKAKDSQPIVSFDGNSS-EQETFVRDQKSTGAEVHMQAMLP----- 583
Query: 606 PASALSSGKEEQQPTGCSFKSNQDSEHGNNSTPVRNELALDRGKAIAPLASVSDTMQITK 665
+ +S+GKE+QQ G S KS++ SEH N PV N+LALD+GKA+A A V+DT QI K
Sbjct: 584 -VTKVSAGKEDQQSAGFSAKSDKKSEHVINRAPVINDLALDKGKAVASQALVTDTAQINK 642
Query: 666 TAQASTV-SQPKDGGSTRKYHGPLFDFPSFTRKPDSFGSSTMVNNNNLSLA-YDVKDLLL 723
AQ+STV PKD G +KY+GPLFDFP FTRK DSFGSS M NNNN YDVK+LL
Sbjct: 643 PAQSSTVVGLPKDAGPAKKYYGPLFDFPFFTRKQDSFGSSMMANNNNNLSLAYDVKELLY 702
Query: 724 EEGMEVLNKKRTENLKKIEGLLAVNIERKRIRPDLVLKLQIEEKKXXXXXXXXXXXXXXX 783
EEG EV NK+RTENLKKIEGLLAVN+ERKRIRPDLVLKLQIEEKK
Sbjct: 703 EEGTEVFNKRRTENLKKIEGLLAVNLERKRIRPDLVLKLQIEEKKLRLLDLQARLRGEID 762
Query: 784 XXXXEIMAMPDRPYRKFVRLCERQRMELARQVQASRRALREKQLKSIFLWRKKLLEAHWA 843
EIMAMPDRPYRKFV+LCERQR+ELARQVQ S++ALREKQLKSIF WRKKLLE HWA
Sbjct: 763 QQQQEIMAMPDRPYRKFVKLCERQRVELARQVQTSQKALREKQLKSIFQWRKKLLEVHWA 822
Query: 844 IRDARTARNRGVAKYHERMLREFSKHKDDDRHKRMEALKNNDVDRYREMLLEQQSSIPGE 903
IRDARTARNRGVAKYHE+ML+EFSK+KDDDR+KRMEALKNNDVDRYREMLLEQQ+S+PG+
Sbjct: 823 IRDARTARNRGVAKYHEKMLKEFSKNKDDDRNKRMEALKNNDVDRYREMLLEQQTSLPGD 882
Query: 904 ASERYAVLSSFLSQTEEYLHKLGSKITXXXXXXXXXXXXXXXXXXXRLQGLSEEEVRAAA 963
A+ERY VLS+FL+QTEEYL KLGSKIT RLQGLSEEEVRAAA
Sbjct: 883 AAERYNVLSTFLTQTEEYLQKLGSKITSAKNQQEVEESAKAAAAAARLQGLSEEEVRAAA 942
Query: 964 ACAGEEVMIRNRFLEMNAPRD-SSSVNKYYNLAHAVNEVVIRQPSLLRAGTLRDYQLVGL 1022
ACAGEEVMIRNRF+EMNAP+D SSSV+KYYNLAHAVNE V+RQPS+LRAGTLR+YQLVGL
Sbjct: 943 ACAGEEVMIRNRFMEMNAPKDGSSSVSKYYNLAHAVNEKVLRQPSMLRAGTLREYQLVGL 1002
Query: 1023 QWMLSLYNNKLNGILADEMGLGKTVQV 1049
QWMLSLYNNKLNGILADEMGLGKTVQV
Sbjct: 1003 QWMLSLYNNKLNGILADEMGLGKTVQV 1029
>Medtr4g118720.1 | SNF2 family amine-terminal protein | HC |
chr4:49190490-49169826 | 20130731
Length = 3282
Score = 124 bits (310), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 91/265 (34%), Positives = 135/265 (50%), Gaps = 55/265 (20%)
Query: 802 RLCERQRMELARQVQASRRALREKQ---LKSIFLWRKKLLEAHWAIRDARTARNRGVAKY 858
R+ + +R EL + + +R +RE+Q I + ++KL + R+ NR V ++
Sbjct: 814 RVKQLERYELKMKEERQKR-IRERQKEFFTEIEVHKEKLDDVFKIKRERWKGVNRYVKEF 872
Query: 859 HERMLREFSKHKDDDRHKRMEALKNNDVDRYREMLLEQQSSIPGEASERYAVLSSFLSQT 918
H+R R + D + +++ LK NDV+ Y M+ + +S +R + L T
Sbjct: 873 HKRKERIHREKIDRIQREKINLLKINDVEGYLRMVQDAKS-------DR---VKQLLKAT 922
Query: 919 EEYLHKLGSKITXXXXXXXXXXXXXXXXXXXRLQGLSEEEVRAAAACAGEEVMI--RNRF 976
E+YL KLGSK+ +E +AAA +G++V F
Sbjct: 923 EKYLQKLGSKL---------------------------QEAKAAAERSGQDVDEGGSTNF 955
Query: 977 LEMN----APRDSS--------SVNKYYNLAHAVNEVVIRQPSLLRAGTLRDYQLVGLQW 1024
LE + D S S KYY +AH+V E + QPS+L G LR+YQ+ GL+W
Sbjct: 956 LENSETTLVDEDESDQAKHYMESNEKYYKMAHSVKESIAEQPSILHGGKLREYQMNGLRW 1015
Query: 1025 MLSLYNNKLNGILADEMGLGKTVQV 1049
++SLYNN LNGILADEMGLGKTVQV
Sbjct: 1016 LVSLYNNHLNGILADEMGLGKTVQV 1040
>Medtr1g105050.1 | chromatin remodeling factor, putative | HC |
chr1:47349899-47341180 | 20130731
Length = 1083
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/59 (67%), Positives = 47/59 (79%), Gaps = 1/59 (1%)
Query: 992 YNLA-HAVNEVVIRQPSLLRAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQV 1049
YN A H++ E V QPS+L+ G LR YQ+ GLQWMLSL+NN LNGILADEMGLGKT+Q
Sbjct: 353 YNSAIHSIQEKVTEQPSILQGGELRSYQIEGLQWMLSLFNNNLNGILADEMGLGKTIQT 411
>Medtr5g005840.1 | chromatin remodeling factor, putative | HC |
chr5:644652-653059 | 20130731
Length = 1063
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/60 (63%), Positives = 47/60 (78%)
Query: 990 KYYNLAHAVNEVVIRQPSLLRAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQV 1049
+Y + H++ E V QPS+L+ G LR YQ+ GLQWMLSL+NN LNGILADEMGLGKT+Q
Sbjct: 339 QYNSTIHSIQEKVTEQPSMLQGGELRPYQIEGLQWMLSLFNNNLNGILADEMGLGKTIQT 398
>Medtr2g020000.1 | chromatin remodeling factor, putative | HC |
chr2:6619806-6610735 | 20130731
Length = 1066
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 999 NEVVIRQPSLLRAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQV 1049
N ++ QPS ++ G +RDYQL GL W++ LY N +NGILADEMGLGKT+Q
Sbjct: 177 NTRLVTQPSCIQ-GKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQT 226
>Medtr4g118845.1 | chromatin remodeling factor, putative | HC |
chr4:49251792-49260219 | 20130731
Length = 1063
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 999 NEVVIRQPSLLRAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQV 1049
N ++ QPS ++ G +RDYQL GL W++ LY N +NGILADEMGLGKT+Q
Sbjct: 174 NTRLVTQPSCIQ-GKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQT 223
>Medtr7g090960.2 | DNA helicase INO80-like protein | HC |
chr7:35860856-35873661 | 20130731
Length = 1433
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Query: 1003 IRQPSLLRAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQ 1048
+R P L G L+DYQL GLQW+++ Y LNGILADEMGLGKT+Q
Sbjct: 487 VRTPELFN-GCLKDYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQ 531
>Medtr7g090960.1 | DNA helicase INO80-like protein | HC |
chr7:35860856-35873661 | 20130731
Length = 1514
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Query: 1002 VIRQPSLLRAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQ 1048
+R P L G L+DYQL GLQW+++ Y LNGILADEMGLGKT+Q
Sbjct: 567 TVRTPELFN-GCLKDYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQ 612
>Medtr1g053955.1 | helicase | HC | chr1:22924323-22942659 | 20130731
Length = 2044
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 997 AVNEVVIRQPSLLRAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTV 1047
+ +V + P LL+ +LR+YQ +GL W++++Y KLNGILADEMGLGKT+
Sbjct: 505 STTKVRTKFPFLLKY-SLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTI 554
>Medtr5g020000.1 | chromatin-remodeling complex ATPase chain, putative
| HC | chr5:7592986-7599103 | 20130731
Length = 750
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 34/41 (82%)
Query: 1008 LLRAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQ 1048
LL G L+ YQL G++W++SL+ N LNGILAD+MGLGKT+Q
Sbjct: 178 LLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQ 218
>Medtr4g118845.2 | chromatin remodeling factor, putative | HC |
chr4:49253207-49260120 | 20130731
Length = 876
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 1014 LRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQ 1048
+RDYQL GL W++ LY N +NGILADEMGLGKT+Q
Sbjct: 1 MRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQ 35
>Medtr3g053910.1 | chromodomain helicase DNA-binding protein, putative
| HC | chr3:16763046-16784207 | 20130731
Length = 1739
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 33/44 (75%)
Query: 1005 QPSLLRAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQ 1048
QP L+ G LRDYQL GL ++++ + N N +LADEMGLGKTVQ
Sbjct: 591 QPEWLKGGKLRDYQLEGLNFLVNSWKNDTNVVLADEMGLGKTVQ 634
>Medtr3g053910.3 | chromodomain helicase DNA-binding protein, putative
| HC | chr3:16761484-16784751 | 20130731
Length = 1739
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 33/44 (75%)
Query: 1005 QPSLLRAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQ 1048
QP L+ G LRDYQL GL ++++ + N N +LADEMGLGKTVQ
Sbjct: 591 QPEWLKGGKLRDYQLEGLNFLVNSWKNDTNVVLADEMGLGKTVQ 634
>Medtr3g053910.4 | chromodomain helicase DNA-binding protein, putative
| HC | chr3:16761487-16784695 | 20130731
Length = 1710
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 33/44 (75%)
Query: 1005 QPSLLRAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQ 1048
QP L+ G LRDYQL GL ++++ + N N +LADEMGLGKTVQ
Sbjct: 562 QPEWLKGGKLRDYQLEGLNFLVNSWKNDTNVVLADEMGLGKTVQ 605
>Medtr3g053910.2 | chromodomain helicase DNA-binding protein, putative
| HC | chr3:16761484-16784751 | 20130731
Length = 1710
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 33/44 (75%)
Query: 1005 QPSLLRAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQ 1048
QP L+ G LRDYQL GL ++++ + N N +LADEMGLGKTVQ
Sbjct: 562 QPEWLKGGKLRDYQLEGLNFLVNSWKNDTNVVLADEMGLGKTVQ 605
>Medtr5g090090.1 | chromodomain helicase-DNA-binding protein | HC |
chr5:39219576-39200089 | 20130731
Length = 1383
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 32/44 (72%)
Query: 1005 QPSLLRAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQ 1048
QP L G LRDYQL GL ++++ + N N ILADEMGLGKTVQ
Sbjct: 608 QPEWLMGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQ 651
>Medtr5g090090.2 | chromodomain helicase-DNA-binding protein | HC |
chr5:39219576-39198108 | 20130731
Length = 1563
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 32/44 (72%)
Query: 1005 QPSLLRAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQ 1048
QP L G LRDYQL GL ++++ + N N ILADEMGLGKTVQ
Sbjct: 608 QPEWLMGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQ 651
>Medtr4g096930.1 | chromatin remodeling complex subunit | HC |
chr4:38597416-38612562 | 20130731
Length = 2317
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 974 NRFLEMNAPRDSSSVNKYYNLAHAVNEVV--IRQPSLLRAGTLRDYQLVGLQWMLSLYNN 1031
N F + R++S N + N++V + QP LR G+L +QL L W+ +
Sbjct: 692 NMFETLTLEREASKENSTKKSSDRQNDIVNLLEQPKELRGGSLFPHQLEALNWLRKCWYK 751
Query: 1032 KLNGILADEMGLGKTV 1047
N ILADEMGLGKT+
Sbjct: 752 SRNVILADEMGLGKTI 767