Miyakogusa Predicted Gene

Lj3g3v2330880.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2330880.2 Non Characterized Hit- tr|B9FAB8|B9FAB8_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,27.78,3e-18,coiled-coil,NULL; seg,NULL; OS03G0143700
PROTEIN,NULL; PHOSPHATIDYLINOSITOL
N-ACETYLGLUCOSAMINYLTRAN,CUFF.43925.2
         (388 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g030730.1 | PAIR1, putative | HC | chr8:11395428-11399892 ...   412   e-115

>Medtr8g030730.1 | PAIR1, putative | HC | chr8:11395428-11399892 |
           20130731
          Length = 457

 Score =  412 bits (1060), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 216/322 (67%), Positives = 249/322 (77%), Gaps = 23/322 (7%)

Query: 26  LSNFSQSSLDEAVTTNDQRMGSQEYENSSKKISSLPRLTYSREESQPPNSRSSGNLMVKW 85
           LS+FSQSSLDEA+TTNDQR  SQE ENSS++ SSLPRLTYS++ESQP NSRSS NL+VKW
Sbjct: 82  LSHFSQSSLDEAITTNDQRAASQELENSSRRFSSLPRLTYSKDESQPHNSRSSSNLLVKW 141

Query: 86  NSADPKSQLSEGLEHRIGMMETSLSRFAMILDSVQSDVMQVNKGTKEMILDMDYIRQKLI 145
           NSAD K+QLSEGLE+RIG+METSLSRFAMI+DSVQSDVMQVNKGTKEM L+M+ IRQKLI
Sbjct: 142 NSADNKNQLSEGLENRIGIMETSLSRFAMIMDSVQSDVMQVNKGTKEMHLEMECIRQKLI 201

Query: 146 AQDNSLQLMTKGQEDIKARIDGSLKSVTEQLSQVTNNEKLQEVYLMVSAFPQLFEASLRN 205
           AQDN+LQLM KGQE+IKA I+GSLKS++EQ+S+VT+ EKLQEVY++VS+ PQL E SLRN
Sbjct: 202 AQDNTLQLMMKGQEEIKASINGSLKSLSEQMSRVTDIEKLQEVYMLVSSMPQLIEGSLRN 261

Query: 206 VQTYLHNTTKEMQEISCSLKNLNPKNLAQPILSSKEISGSLKNLNPKNLAQPILSSKSIS 265
           +Q  L NTTKEM+EISCSLK+ N K+LA                      QPILS K +S
Sbjct: 262 LQNNLQNTTKEMKEISCSLKHSNQKDLA----------------------QPILSPKCVS 299

Query: 266 KQATPPKMRQPPVSEVKMRTRAAAAPKVKMGGWMSVKKE-VTFSDRISEKVQKKKEPCSE 324
           KQ   PKMRQ P  E K  T    A +   GGW  VK+E VTFSDRISEKVQK+  P  E
Sbjct: 300 KQVITPKMRQTPAVEAKKNTPVIVASEADTGGWRPVKRERVTFSDRISEKVQKRIPPKVE 359

Query: 325 KIVRGGRDCAIVIESDEEDGAF 346
           K +RGGRD AIVIESDEE   F
Sbjct: 360 KGIRGGRDYAIVIESDEESDCF 381