Miyakogusa Predicted Gene

Lj3g3v2330880.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2330880.1 Non Characterized Hit- tr|Q10T00|Q10T00_ORYSJ
PAIR1 protein, putative, expressed OS=Oryza sativa
sub,35.48,1e-17,OS03G0143700 PROTEIN,NULL; PHOSPHATIDYLINOSITOL
N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P (DOWN SYND,CUFF.43925.1
         (402 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g030730.1 | PAIR1, putative | HC | chr8:11395428-11399892 ...   421   e-118

>Medtr8g030730.1 | PAIR1, putative | HC | chr8:11395428-11399892 |
           20130731
          Length = 457

 Score =  421 bits (1081), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 216/301 (71%), Positives = 248/301 (82%), Gaps = 2/301 (0%)

Query: 26  LSNFSQSSLDEAVTTNDQRMGSQEYENSSKKISSLPRLTYSREESQPPNSRSSGNLMVKW 85
           LS+FSQSSLDEA+TTNDQR  SQE ENSS++ SSLPRLTYS++ESQP NSRSS NL+VKW
Sbjct: 82  LSHFSQSSLDEAITTNDQRAASQELENSSRRFSSLPRLTYSKDESQPHNSRSSSNLLVKW 141

Query: 86  NSADPKTGQLSEGLEHRIGMMETSLSRFAMILDSVQSDVMQVNKGTKEMILDMDYIRQKL 145
           NSAD K  QLSEGLE+RIG+METSLSRFAMI+DSVQSDVMQVNKGTKEM L+M+ IRQKL
Sbjct: 142 NSADNKN-QLSEGLENRIGIMETSLSRFAMIMDSVQSDVMQVNKGTKEMHLEMECIRQKL 200

Query: 146 IAQDNSLQLMTKGQEDIKARIDGSLKSVTEQLSQVTNNEKLQEVYLMVSAFPQLFEASLR 205
           IAQDN+LQLM KGQE+IKA I+GSLKS++EQ+S+VT+ EKLQEVY++VS+ PQL E SLR
Sbjct: 201 IAQDNTLQLMMKGQEEIKASINGSLKSLSEQMSRVTDIEKLQEVYMLVSSMPQLIEGSLR 260

Query: 206 NVQTYLHNTTKEMQEISCSLKNLNPKNLAQPILSSKSISKQATPPKMRQPPVSEVKMRTR 265
           N+Q  L NTTKEM+EISCSLK+ N K+LAQPILS K +SKQ   PKMRQ P  E K  T 
Sbjct: 261 NLQNNLQNTTKEMKEISCSLKHSNQKDLAQPILSPKCVSKQVITPKMRQTPAVEAKKNTP 320

Query: 266 AAAAPKVKMGGWMSVKKE-VTFSDRISEKVQKKKEPCSEKIVRGGRDCAIVIESDEEDGA 324
              A +   GGW  VK+E VTFSDRISEKVQK+  P  EK +RGGRD AIVIESDEE   
Sbjct: 321 VIVASEADTGGWRPVKRERVTFSDRISEKVQKRIPPKVEKGIRGGRDYAIVIESDEESDC 380

Query: 325 F 325
           F
Sbjct: 381 F 381