Miyakogusa Predicted Gene

Lj3g3v2330830.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2330830.1 Non Characterized Hit- tr|I1KID8|I1KID8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.53961
PE,84.96,0,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
coiled-coil,NULL; PRONE,Plant specific Ro,CUFF.43920.1
         (235 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g030850.2 | RHO guanyl-nucleotide exchange factor | HC | c...   307   7e-84
Medtr8g030850.1 | RHO guanyl-nucleotide exchange factor | HC | c...   307   7e-84
Medtr7g077690.1 | RHO guanyl-nucleotide exchange factor | HC | c...   220   7e-58
Medtr4g019770.1 | RHO guanyl-nucleotide exchange factor | HC | c...   137   7e-33
Medtr7g065220.1 | RHO guanyl-nucleotide exchange factor | HC | c...   134   5e-32
Medtr4g075640.1 | Rop guanine nucleotide exchange factor | HC | ...   132   3e-31
Medtr5g081410.1 | RHO guanyl-nucleotide exchange factor | HC | c...   132   3e-31
Medtr3g069590.2 | RHO guanyl-nucleotide exchange factor | HC | c...   130   1e-30
Medtr3g069590.1 | RHO guanyl-nucleotide exchange factor | HC | c...   130   1e-30
Medtr2g101830.1 | RHO guanyl-nucleotide exchange factor | HC | c...   129   2e-30
Medtr6g087700.1 | RHO guanyl-nucleotide exchange factor | HC | c...   128   4e-30
Medtr5g025960.1 | RHO guanyl-nucleotide exchange factor | HC | c...   115   4e-26
Medtr4g013165.1 | RHO guanyl-nucleotide exchange factor | HC | c...    76   2e-14

>Medtr8g030850.2 | RHO guanyl-nucleotide exchange factor | HC |
           chr8:11477789-11473977 | 20130731
          Length = 470

 Score =  307 bits (786), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 157/225 (69%), Positives = 170/225 (75%), Gaps = 13/225 (5%)

Query: 1   MDNSSNFDENSDVGYLPSPSSVDQNDHSITETAGYSPFSVDSFAYYRSNSEVSTLSEPID 60
           MDNSSNFD           +S DQNDHSI+ET  YSPFS DSFAY RSNSEVS LSE ID
Sbjct: 1   MDNSSNFD----------STSSDQNDHSISETPEYSPFSGDSFAYCRSNSEVSNLSETID 50

Query: 61  DNSSASEPSPSPWISVKHGASQASLSRLGMKQRKHSXXXXXXXXXXXXXXXXXXXXRFAK 120
           DNS AS+PSPSPW++VKHGA+   LSRLGMKQRKHS                    RF+K
Sbjct: 51  DNSYASDPSPSPWMNVKHGAA---LSRLGMKQRKHSLGEKSDDLDLLESELEMMKERFSK 107

Query: 121 ILLGEDMSGGGKGVSTAVTISNSITNLYATVFGQNXXXXXXXXXXXAMWIREMNCLLSVC 180
           +LLGEDMSGGGKGV TAVTISNSITNLYATVFGQN           AMW REMNCL+SVC
Sbjct: 108 LLLGEDMSGGGKGVCTAVTISNSITNLYATVFGQNLKLEPLKPEKKAMWKREMNCLMSVC 167

Query: 181 EYIVEFAPTAQYLEDGTIVEMMTSRPRSDIYVNLPALQKLDTMLI 225
           +YIVEFAPTAQYL+DGTIVEMMTSRPR+DIY+NLPALQKLDTMLI
Sbjct: 168 DYIVEFAPTAQYLDDGTIVEMMTSRPRADIYINLPALQKLDTMLI 212


>Medtr8g030850.1 | RHO guanyl-nucleotide exchange factor | HC |
           chr8:11478040-11473877 | 20130731
          Length = 470

 Score =  307 bits (786), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 157/225 (69%), Positives = 170/225 (75%), Gaps = 13/225 (5%)

Query: 1   MDNSSNFDENSDVGYLPSPSSVDQNDHSITETAGYSPFSVDSFAYYRSNSEVSTLSEPID 60
           MDNSSNFD           +S DQNDHSI+ET  YSPFS DSFAY RSNSEVS LSE ID
Sbjct: 1   MDNSSNFD----------STSSDQNDHSISETPEYSPFSGDSFAYCRSNSEVSNLSETID 50

Query: 61  DNSSASEPSPSPWISVKHGASQASLSRLGMKQRKHSXXXXXXXXXXXXXXXXXXXXRFAK 120
           DNS AS+PSPSPW++VKHGA+   LSRLGMKQRKHS                    RF+K
Sbjct: 51  DNSYASDPSPSPWMNVKHGAA---LSRLGMKQRKHSLGEKSDDLDLLESELEMMKERFSK 107

Query: 121 ILLGEDMSGGGKGVSTAVTISNSITNLYATVFGQNXXXXXXXXXXXAMWIREMNCLLSVC 180
           +LLGEDMSGGGKGV TAVTISNSITNLYATVFGQN           AMW REMNCL+SVC
Sbjct: 108 LLLGEDMSGGGKGVCTAVTISNSITNLYATVFGQNLKLEPLKPEKKAMWKREMNCLMSVC 167

Query: 181 EYIVEFAPTAQYLEDGTIVEMMTSRPRSDIYVNLPALQKLDTMLI 225
           +YIVEFAPTAQYL+DGTIVEMMTSRPR+DIY+NLPALQKLDTMLI
Sbjct: 168 DYIVEFAPTAQYLDDGTIVEMMTSRPRADIYINLPALQKLDTMLI 212


>Medtr7g077690.1 | RHO guanyl-nucleotide exchange factor | HC |
           chr7:29297652-29300584 | 20130731
          Length = 532

 Score =  220 bits (561), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 134/236 (56%), Positives = 150/236 (63%), Gaps = 19/236 (8%)

Query: 1   MDNSSNFDENSDVGYLPSPSSVDQNDHSITETAGYSPFSVDSFAYYR----SNSEVSTLS 56
           M+ S  F E SDV Y PSPS    + H +++T  +S  S DSF Y R    S++  S  S
Sbjct: 1   MNKSFKFGEISDVEYHPSPS---MDHHLVSDTPAFSRLSGDSFGYCRVWTSSDASNSNFS 57

Query: 57  EPIDDNSSASEPSPSP------WISVKHGASQASLSRLGMKQRKHSXXXXXXXXXXXXX- 109
           + +DD+S ASE SP P      W   K G     LSRLGMK RKHS              
Sbjct: 58  DSVDDSSYASESSPLPSPSPSRWREAKPG-----LSRLGMKLRKHSIDDKLDENDLFDSG 112

Query: 110 XXXXXXXRFAKILLGEDMSGGGKGVSTAVTISNSITNLYATVFGQNXXXXXXXXXXXAMW 169
                  RFAK+LLGEDMSGGGKGVSTAVTISN+ITNLYATVFGQ+            MW
Sbjct: 113 ELEMMKERFAKLLLGEDMSGGGKGVSTAVTISNAITNLYATVFGQSLKLEPLKPEKKIMW 172

Query: 170 IREMNCLLSVCEYIVEFAPTAQYLEDGTIVEMMTSRPRSDIYVNLPALQKLDTMLI 225
            REM  LLSVC+YI EFAPTAQYLEDGTIVEMM SRPRSDIY+NLPALQKLDTMLI
Sbjct: 173 KREMKVLLSVCDYIQEFAPTAQYLEDGTIVEMMKSRPRSDIYINLPALQKLDTMLI 228


>Medtr4g019770.1 | RHO guanyl-nucleotide exchange factor | HC |
           chr4:6266234-6262535 | 20130731
          Length = 542

 Score =  137 bits (346), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 67/109 (61%), Positives = 78/109 (71%)

Query: 117 RFAKILLGEDMSGGGKGVSTAVTISNSITNLYATVFGQNXXXXXXXXXXXAMWIREMNCL 176
           RFAK+LLGEDMSG G GV TA+ ISN+ITNL ATVFGQ            AMW REM  L
Sbjct: 103 RFAKLLLGEDMSGSGNGVPTALAISNAITNLCATVFGQLWRLEPLSPEKKAMWQREMEWL 162

Query: 177 LSVCEYIVEFAPTAQYLEDGTIVEMMTSRPRSDIYVNLPALQKLDTMLI 225
           L V ++IVEF PT Q   DG+  E+MT RPRSD+Y+NLPAL+KLD ML+
Sbjct: 163 LCVSDHIVEFKPTWQTFPDGSRFEVMTCRPRSDLYINLPALRKLDNMLL 211


>Medtr7g065220.1 | RHO guanyl-nucleotide exchange factor | HC |
           chr7:23784213-23780879 | 20130731
          Length = 656

 Score =  134 bits (338), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 67/118 (56%), Positives = 84/118 (71%), Gaps = 1/118 (0%)

Query: 117 RFAKILLGEDMSGGGKGVSTAVTISNSITNLYATVFGQNXXXXXXXXXXXAMWIREMNCL 176
           RFAK+LLGEDMSG G GV TA+ ISN+ITNL AT+FGQ            AMW REM   
Sbjct: 191 RFAKLLLGEDMSGCGNGVPTALAISNAITNLCATLFGQLWRLEPLRSEKKAMWRREMEWF 250

Query: 177 LSVCEYIVEFAPTAQYLEDGTIVEMMTSRPRSDIYVNLPALQKLDTMLI-VRESSMDS 233
           LSV ++IVE  P  Q   DG+ +E+MT RPRSD+YVNLPAL+KLD ML+ +++S +D+
Sbjct: 251 LSVSDHIVELTPNWQTFPDGSKLEVMTCRPRSDLYVNLPALRKLDNMLLEIQDSFVDT 308


>Medtr4g075640.1 | Rop guanine nucleotide exchange factor | HC |
           chr4:28908900-28905362 | 20130731
          Length = 558

 Score =  132 bits (332), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 64/109 (58%), Positives = 76/109 (69%)

Query: 117 RFAKILLGEDMSGGGKGVSTAVTISNSITNLYATVFGQNXXXXXXXXXXXAMWIREMNCL 176
           RFAK+LLGEDMSGGGKGV TA+ ISN+ITNL ATVFG+            AMW REM  L
Sbjct: 94  RFAKLLLGEDMSGGGKGVCTALAISNAITNLSATVFGELWRLEPLAPQKKAMWRREMEWL 153

Query: 177 LSVCEYIVEFAPTAQYLEDGTIVEMMTSRPRSDIYVNLPALQKLDTMLI 225
           L V + IVE  P+ Q    G   E+M +RPRSD+Y+NLPAL+KLD ML+
Sbjct: 154 LCVSDSIVELVPSVQQFPGGGTYEVMATRPRSDLYINLPALKKLDGMLL 202


>Medtr5g081410.1 | RHO guanyl-nucleotide exchange factor | HC |
           chr5:34865519-34861053 | 20130731
          Length = 576

 Score =  132 bits (332), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 67/118 (56%), Positives = 81/118 (68%), Gaps = 3/118 (2%)

Query: 117 RFAKILLGEDMSGGGKGVSTAVTISNSITNLYATVFGQNXXXXXXXXXXXAMWIREMNCL 176
           RFAK+LLGEDMSG GKGVSTA+ ISN+ITNL  TVFGQ              W REM+ L
Sbjct: 89  RFAKLLLGEDMSGSGKGVSTALAISNAITNLCGTVFGQLWRLEPVPCEKKEKWQREMDWL 148

Query: 177 LSVCEYIVEFAPTAQYLEDGTIVEMMTSRPRSDIYVNLPALQKLDTMLIVRESSMDSC 234
           L V ++IVE  P+ Q   DG+  E+MT RPRSDI++NLPAL+KLD ML+     +DSC
Sbjct: 149 LCVGDHIVELMPSWQTYPDGSKQEVMTCRPRSDIFINLPALRKLDNMLL---EILDSC 203


>Medtr3g069590.2 | RHO guanyl-nucleotide exchange factor | HC |
           chr3:31131780-31127698 | 20130731
          Length = 435

 Score =  130 bits (327), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 63/109 (57%), Positives = 76/109 (69%)

Query: 117 RFAKILLGEDMSGGGKGVSTAVTISNSITNLYATVFGQNXXXXXXXXXXXAMWIREMNCL 176
           RFAK+LLGEDMSG GKGV TA+ ISN+ITNL AT FGQ             MW REM  L
Sbjct: 107 RFAKLLLGEDMSGSGKGVCTALAISNAITNLCATAFGQLWRLEPLPCEKKKMWQREMEWL 166

Query: 177 LSVCEYIVEFAPTAQYLEDGTIVEMMTSRPRSDIYVNLPALQKLDTMLI 225
           +SV ++IVE  P+ Q   DG  +E+MT RPR+DI +NLPAL+KLD ML+
Sbjct: 167 VSVSDHIVELIPSWQTFPDGKKLEVMTCRPRTDICINLPALRKLDNMLL 215


>Medtr3g069590.1 | RHO guanyl-nucleotide exchange factor | HC |
           chr3:31131780-31127698 | 20130731
          Length = 595

 Score =  130 bits (326), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 63/109 (57%), Positives = 76/109 (69%)

Query: 117 RFAKILLGEDMSGGGKGVSTAVTISNSITNLYATVFGQNXXXXXXXXXXXAMWIREMNCL 176
           RFAK+LLGEDMSG GKGV TA+ ISN+ITNL AT FGQ             MW REM  L
Sbjct: 107 RFAKLLLGEDMSGSGKGVCTALAISNAITNLCATAFGQLWRLEPLPCEKKKMWQREMEWL 166

Query: 177 LSVCEYIVEFAPTAQYLEDGTIVEMMTSRPRSDIYVNLPALQKLDTMLI 225
           +SV ++IVE  P+ Q   DG  +E+MT RPR+DI +NLPAL+KLD ML+
Sbjct: 167 VSVSDHIVELIPSWQTFPDGKKLEVMTCRPRTDICINLPALRKLDNMLL 215


>Medtr2g101830.1 | RHO guanyl-nucleotide exchange factor | HC |
           chr2:43813630-43810264 | 20130731
          Length = 533

 Score =  129 bits (324), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 57/109 (52%), Positives = 81/109 (74%)

Query: 117 RFAKILLGEDMSGGGKGVSTAVTISNSITNLYATVFGQNXXXXXXXXXXXAMWIREMNCL 176
           RFAK+LLGEDMSGGGKGVS+A+ +SN+ TNL A++FG+            A W +E++ L
Sbjct: 93  RFAKLLLGEDMSGGGKGVSSALALSNAFTNLAASIFGEQKRLEPMPAERKARWRKEIDLL 152

Query: 177 LSVCEYIVEFAPTAQYLEDGTIVEMMTSRPRSDIYVNLPALQKLDTMLI 225
           LSV +Y+VE  P+ Q  +DGT +E+MT+R R+D+++N+PAL+KLD ML 
Sbjct: 153 LSVTDYVVEMVPSQQKSKDGTSMEIMTTRQRTDLHMNIPALRKLDAMLF 201


>Medtr6g087700.1 | RHO guanyl-nucleotide exchange factor | HC |
           chr6:32999908-32996320 | 20130731
          Length = 549

 Score =  128 bits (322), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 58/109 (53%), Positives = 80/109 (73%)

Query: 117 RFAKILLGEDMSGGGKGVSTAVTISNSITNLYATVFGQNXXXXXXXXXXXAMWIREMNCL 176
           RFAK+LLGEDMSG G GVS+A+ +SN+ITNL A+VFG+              W +E+  L
Sbjct: 103 RFAKLLLGEDMSGAGNGVSSALALSNAITNLAASVFGEQSKLEPMSQERKTRWRKEIEWL 162

Query: 177 LSVCEYIVEFAPTAQYLEDGTIVEMMTSRPRSDIYVNLPALQKLDTMLI 225
           LSV ++IVEFAP+ Q  +DG+ +E+MT+R RSD+ +N+PAL+KLD ML+
Sbjct: 163 LSVTDHIVEFAPSQQLAKDGSTMEIMTTRQRSDLLMNIPALRKLDAMLL 211


>Medtr5g025960.1 | RHO guanyl-nucleotide exchange factor | HC |
           chr5:10622248-10613821 | 20130731
          Length = 558

 Score =  115 bits (288), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 55/108 (50%), Positives = 74/108 (68%)

Query: 118 FAKILLGEDMSGGGKGVSTAVTISNSITNLYATVFGQNXXXXXXXXXXXAMWIREMNCLL 177
           F+K+LLGED++GG KG++TA+ +SN+ITNL  TVFG+            + W REM+ LL
Sbjct: 126 FSKLLLGEDVTGGTKGITTALALSNAITNLSVTVFGELWKLEPLSEERKSKWRREMDWLL 185

Query: 178 SVCEYIVEFAPTAQYLEDGTIVEMMTSRPRSDIYVNLPALQKLDTMLI 225
           S   Y+VE  P  Q   +G I E+MT + R+DI++NLPALQKLD MLI
Sbjct: 186 SPTNYMVELVPAKQNNANGRIFEIMTPKARADIHMNLPALQKLDCMLI 233


>Medtr4g013165.1 | RHO guanyl-nucleotide exchange factor | HC |
           chr4:3547567-3550746 | 20130731
          Length = 400

 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 32/59 (54%), Positives = 48/59 (81%)

Query: 167 AMWIREMNCLLSVCEYIVEFAPTAQYLEDGTIVEMMTSRPRSDIYVNLPALQKLDTMLI 225
           A W +E++ LLSV +Y+VE  PT Q  +DG+I+E+MT+R R+D+++N+PAL+KLD MLI
Sbjct: 7   ARWRKEIDWLLSVTDYVVEMVPTQQKSKDGSIMEIMTTRQRTDLHMNIPALRKLDAMLI 65