Miyakogusa Predicted Gene

Lj3g3v2330790.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2330790.2 tr|D7UPI5|D7UPI5_LOTJA BHLH transcription factor
LjTAN1 OS=Lotus japonicus GN=LjTAN1 PE=2 SV=1,96.81,0,SUBFAMILY NOT
NAMED,NULL; MYC,NULL; seg,NULL,CUFF.43918.2
         (408 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g098275.3 | bHLH transcription factor | HC | chr8:41001796...   167   2e-41
Medtr8g098275.2 | bHLH transcription factor | HC | chr8:41000355...   166   5e-41
Medtr8g098275.1 | bHLH transcription factor | HC | chr8:41000594...   165   9e-41
Medtr1g072320.1 | bHLH transcription factor | HC | chr1:32103626...    79   1e-14
Medtr3g104100.1 | helix loop helix DNA-binding domain protein | ...    59   6e-09
Medtr2g081040.1 | helix loop helix DNA-binding domain protein | ...    58   1e-08
Medtr7g083900.2 | basic helix loop helix protein BHLH23 | HC | c...    52   7e-07
Medtr7g083900.3 | basic helix loop helix protein BHLH23 | HC | c...    52   8e-07
Medtr7g083900.1 | basic helix loop helix protein BHLH23 | HC | c...    52   8e-07

>Medtr8g098275.3 | bHLH transcription factor | HC |
           chr8:41001796-41004842 | 20130731
          Length = 444

 Score =  167 bits (423), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 115/316 (36%), Positives = 182/316 (57%), Gaps = 17/316 (5%)

Query: 104 QDCDDNSKSSSLDIGADEVLYYTRTLCAVLGNSSSFA-----QNLCASKSSFVKWNKGGV 158
           +DC++N K S +D    E  +Y + L  +L ++         QN    +SSF  WNKG  
Sbjct: 135 EDCNNNQKMSLVD-PLSEDWHYQKILSELLKSNDQLTMGMHFQNF-HQESSFCVWNKGVP 192

Query: 159 SERKWPR--LQQMMLKKTLFDVPFMHLSCSSLKLQKENGRKEWTSKLENADNFMGNVFSD 216
              + PR    Q +LKK LF+VP MH     L+ Q+EN  +E T +LE AD  M +V S+
Sbjct: 193 VNFQRPRQGTSQKLLKKILFEVPRMHTD-GLLESQEENDYREGT-RLE-ADEGMNHVLSE 249

Query: 217 KKRESR---NIQVLKSVAPSACEVEKISVLGDTIQYLKKLEARVEELESYMDTTATGART 273
           ++R ++       L+S+ PS  + +K+S+L D I+YL+KLE ++ ELE+  + T   +R+
Sbjct: 250 RRRRAKLNERFLTLRSMVPSNSKDDKVSILDDAIEYLRKLEKKIRELEAQREPTGIESRS 309

Query: 274 RRKCPDVQEQISDSYGPSNIYMGMKKSRINKRKACDIDDIDTGLDMIVSEEDKPLDVKVN 333
           ++   D+ E+ +D Y  +    G KK  + KRK CDI++    +    S+     +V V+
Sbjct: 310 KKSHHDMVERTTDHYYNNKTNNG-KKPMVKKRKICDIEETRREICSDASKGSSNKNVTVS 368

Query: 334 MKEEEVLIEMKCPYREYILYDIMDAISNLHIDAHTVDSS-TADGVLTFKLKSKFRGAATA 392
           M +  V+IEMKCP +   + +IM+A++NL+ID ++V S+  ADG L   +KSKF+G A A
Sbjct: 369 MSDNGVVIEMKCPSKAGRILEIMEAVNNLNIDFNSVQSTEEADGSLHLIIKSKFKGPANA 428

Query: 393 PVRMIKEALWKVSGKI 408
             + IK+AL KV+ K 
Sbjct: 429 TTKRIKQALQKVASKF 444


>Medtr8g098275.2 | bHLH transcription factor | HC |
           chr8:41000355-41004473 | 20130731
          Length = 508

 Score =  166 bits (419), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 115/316 (36%), Positives = 182/316 (57%), Gaps = 17/316 (5%)

Query: 104 QDCDDNSKSSSLDIGADEVLYYTRTLCAVLGNSSSFA-----QNLCASKSSFVKWNKGGV 158
           +DC++N K S +D    E  +Y + L  +L ++         QN    +SSF  WNKG  
Sbjct: 199 EDCNNNQKMSLVD-PLSEDWHYQKILSELLKSNDQLTMGMHFQNF-HQESSFCVWNKGVP 256

Query: 159 SERKWPR--LQQMMLKKTLFDVPFMHLSCSSLKLQKENGRKEWTSKLENADNFMGNVFSD 216
              + PR    Q +LKK LF+VP MH     L+ Q+EN  +E T +LE AD  M +V S+
Sbjct: 257 VNFQRPRQGTSQKLLKKILFEVPRMHTD-GLLESQEENDYREGT-RLE-ADEGMNHVLSE 313

Query: 217 KKRESR---NIQVLKSVAPSACEVEKISVLGDTIQYLKKLEARVEELESYMDTTATGART 273
           ++R ++       L+S+ PS  + +K+S+L D I+YL+KLE ++ ELE+  + T   +R+
Sbjct: 314 RRRRAKLNERFLTLRSMVPSNSKDDKVSILDDAIEYLRKLEKKIRELEAQREPTGIESRS 373

Query: 274 RRKCPDVQEQISDSYGPSNIYMGMKKSRINKRKACDIDDIDTGLDMIVSEEDKPLDVKVN 333
           ++   D+ E+ +D Y  +    G KK  + KRK CDI++    +    S+     +V V+
Sbjct: 374 KKSHHDMVERTTDHYYNNKTNNG-KKPMVKKRKICDIEETRREICSDASKGSSNKNVTVS 432

Query: 334 MKEEEVLIEMKCPYREYILYDIMDAISNLHIDAHTVDSS-TADGVLTFKLKSKFRGAATA 392
           M +  V+IEMKCP +   + +IM+A++NL+ID ++V S+  ADG L   +KSKF+G A A
Sbjct: 433 MSDNGVVIEMKCPSKAGRILEIMEAVNNLNIDFNSVQSTEEADGSLHLIIKSKFKGPANA 492

Query: 393 PVRMIKEALWKVSGKI 408
             + IK+AL KV+ K 
Sbjct: 493 TTKRIKQALQKVASKF 508


>Medtr8g098275.1 | bHLH transcription factor | HC |
           chr8:41000594-41004473 | 20130731
          Length = 601

 Score =  165 bits (417), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 115/316 (36%), Positives = 182/316 (57%), Gaps = 17/316 (5%)

Query: 104 QDCDDNSKSSSLDIGADEVLYYTRTLCAVLGNSSSFA-----QNLCASKSSFVKWNKGGV 158
           +DC++N K S +D    E  +Y + L  +L ++         QN    +SSF  WNKG  
Sbjct: 292 EDCNNNQKMSLVD-PLSEDWHYQKILSELLKSNDQLTMGMHFQNF-HQESSFCVWNKGVP 349

Query: 159 SERKWPR--LQQMMLKKTLFDVPFMHLSCSSLKLQKENGRKEWTSKLENADNFMGNVFSD 216
              + PR    Q +LKK LF+VP MH     L+ Q+EN  +E T +LE AD  M +V S+
Sbjct: 350 VNFQRPRQGTSQKLLKKILFEVPRMHTD-GLLESQEENDYREGT-RLE-ADEGMNHVLSE 406

Query: 217 KKRESR---NIQVLKSVAPSACEVEKISVLGDTIQYLKKLEARVEELESYMDTTATGART 273
           ++R ++       L+S+ PS  + +K+S+L D I+YL+KLE ++ ELE+  + T   +R+
Sbjct: 407 RRRRAKLNERFLTLRSMVPSNSKDDKVSILDDAIEYLRKLEKKIRELEAQREPTGIESRS 466

Query: 274 RRKCPDVQEQISDSYGPSNIYMGMKKSRINKRKACDIDDIDTGLDMIVSEEDKPLDVKVN 333
           ++   D+ E+ +D Y  +    G KK  + KRK CDI++    +    S+     +V V+
Sbjct: 467 KKSHHDMVERTTDHYYNNKTNNG-KKPMVKKRKICDIEETRREICSDASKGSSNKNVTVS 525

Query: 334 MKEEEVLIEMKCPYREYILYDIMDAISNLHIDAHTVDSS-TADGVLTFKLKSKFRGAATA 392
           M +  V+IEMKCP +   + +IM+A++NL+ID ++V S+  ADG L   +KSKF+G A A
Sbjct: 526 MSDNGVVIEMKCPSKAGRILEIMEAVNNLNIDFNSVQSTEEADGSLHLIIKSKFKGPANA 585

Query: 393 PVRMIKEALWKVSGKI 408
             + IK+AL KV+ K 
Sbjct: 586 TTKRIKQALQKVASKF 601


>Medtr1g072320.1 | bHLH transcription factor | HC |
           chr1:32103626-32096191 | 20130731
          Length = 656

 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/293 (24%), Positives = 134/293 (45%), Gaps = 54/293 (18%)

Query: 124 YYTRTLCAVLGN---------SSSFAQNLCASKSSFVKWN-----KGGVSERKWPRLQQM 169
           +Y++T+  +L N         S S      +++SSF  W                   Q 
Sbjct: 363 HYSQTVSTILQNQSTQWTIDSSPSINYITSSNQSSFTNWTNHHNFHPLPPPETTTTTSQC 422

Query: 170 MLKKTLFDVPFMHL-SCSSLKLQKENGRKEWTSKLEN----ADNFMGN-VFSDKKRESR- 222
           +LK  LF VP++H  +      Q  +   + +SKL       D    N V ++++R  + 
Sbjct: 423 LLKYILFTVPYLHTKNHDETSPQTHDAGVDPSSKLRGKGTPQDELSANHVLAERRRREKL 482

Query: 223 --NIQVLKSVAPSACEVEKISVLGDTIQYLKKLEARVEELESYMDTTATGARTRRKCPDV 280
                +L+S+ P   +++K S+LGDTI+YLK+L  ++++LE+      T  ++R      
Sbjct: 483 NERFIILRSLVPFVTKMDKASILGDTIEYLKQLRRKIQDLETRNRQIETEQQSRSG---- 538

Query: 281 QEQISDSYGPSNIYMGMKKSRI------NKRKACDIDDIDTGLDMIVSEEDKPLDVKVNM 334
              ++   GP++     KK RI       + KA + + + +              V+V++
Sbjct: 539 ---VTVLVGPTD----KKKVRIVEECGATRAKAVETEVVSS--------------VQVSI 577

Query: 335 KEEEVLIEMKCPYREYILYDIMDAISNLHIDAHTVDSSTADGVLTFKLKSKFR 387
            E + L+E++C +RE +L D+M  +  L I+   V SS  +GV   +L++K +
Sbjct: 578 IESDALLEIECLHREGLLLDVMVMLRELRIEVIGVQSSLNNGVFVAELRAKVK 630


>Medtr3g104100.1 | helix loop helix DNA-binding domain protein | LC
           | chr3:47966012-47960662 | 20130731
          Length = 379

 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 94/197 (47%), Gaps = 25/197 (12%)

Query: 213 VFSDKKRE---SRNIQVLKSVAPSACEVEKISVLGDTIQYLKKLEARVEELESYMDTTAT 269
           + ++KKR    S N+  L+SV P   +++KIS+LGD + YL +L+ ++ +L+S  +  ++
Sbjct: 197 LIAEKKRRQKLSDNMHKLRSVVPKITKMDKISILGDAVNYLNELKEQINDLQS--EIASS 254

Query: 270 GARTRRKCPDVQEQISDSYGPSNIYMGMKKSRINKRKACDIDDIDTGLDMIVSEEDKPLD 329
             R+    P     ++ +     + M        K K C         + +   +++P  
Sbjct: 255 SPRSFMPPPTGTHIMTSTMSALPVQM--------KEKLCP--------NNVSGLKNQPTK 298

Query: 330 VKVNMKEEEVL-IEMKCPYREYILYDIMDAISNLHIDAHTVDSSTAD--GVLTFKLKSKF 386
           V V ++EE ++ I M C  +  +L  IM A+ +L +D H  + S  +   +  FK +   
Sbjct: 299 VDVRVREEGIVNIHMFCANKPGVLASIMKALDSLGLDVHQANISCFNDFSLDVFKAEQHS 358

Query: 387 RGAATAPVRMIKEALWK 403
           +     PV+ IK  L K
Sbjct: 359 KDQELTPVQ-IKALLLK 374


>Medtr2g081040.1 | helix loop helix DNA-binding domain protein | LC
           | chr2:33955361-33949610 | 20130731
          Length = 361

 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 87/168 (51%), Gaps = 22/168 (13%)

Query: 213 VFSDKKRE---SRNIQVLKSVAPSACEVEKISVLGDTIQYLKKLEARVEELESYMDTTAT 269
           + ++KKR    S N+  L+SV P   +++KIS+LGD + YLK+L+ ++ +L+S +++++ 
Sbjct: 179 LIAEKKRRQKLSDNMHKLRSVVPKITKMDKISILGDAVDYLKELKKQISDLQSEIESSSP 238

Query: 270 GARTRRKCPDVQEQISDSYGPSNIYMGMKKSRINKRKACDIDDIDTGLDMIVSEEDKPLD 329
            +      P    +I  S   S + + MK+      K C         + +   +++P  
Sbjct: 239 RSFVP---PPAGTRIKTSTM-STLPVQMKE------KLCP--------NNVSGLKNQPTK 280

Query: 330 VKVNMKEEEVL-IEMKCPYREYILYDIMDAISNLHIDAHTVDSSTADG 376
           V V ++E  ++ I M C Y+  +L   M A+ +L +D H  + S  +G
Sbjct: 281 VDVRVREGGIVNIHMLCAYKPDVLASTMKALDSLGLDVHRANISCFNG 328


>Medtr7g083900.2 | basic helix loop helix protein BHLH23 | HC |
           chr7:32316153-32319262 | 20130731
          Length = 476

 Score = 52.4 bits (124), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 90/201 (44%), Gaps = 22/201 (10%)

Query: 212 NVFSDKKRESR---NIQVLKSVAPSACEVEKISVLGDTIQYLKKLEARVEELESYMDTTA 268
           N+ ++++R  +    + +L+SV P   ++++ S+LGD + YLK+L  R+  L + +++T 
Sbjct: 287 NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAVDYLKELLQRINNLHNELESTP 346

Query: 269 TGARTRRKCPDVQEQISDSYGPSNIYMGMKKSRINKRKACDIDDIDTGLDMIVSEEDKPL 328
            G+        +Q   S S+ P          R+        +D+  G D++  +   P 
Sbjct: 347 PGSL-------LQPSASASFHPLTPTPPTLPCRVK-------EDLYPG-DLLSPKNQSP- 390

Query: 329 DVKVNMKE-EEVLIEMKCPYREYILYDIMDAISNLHIDAHTVDSSTADGVL--TFKLKSK 385
            V+V ++E   V I M C  R  +L   M A+ NL +D      S  +G     F+ + +
Sbjct: 391 KVEVRVREGRAVNIHMFCTRRPGLLLSTMRALDNLGLDVQQAVISCFNGFALDVFRAEQQ 450

Query: 386 FRGAATAPVRMIKEALWKVSG 406
            R         IK  L   +G
Sbjct: 451 CREGQDVLPEQIKAVLLDSAG 471


>Medtr7g083900.3 | basic helix loop helix protein BHLH23 | HC |
           chr7:32316216-32319397 | 20130731
          Length = 475

 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 78/172 (45%), Gaps = 18/172 (10%)

Query: 206 ADNFMGNVFSDKKRESRNIQVLKSVAPSACEVEKISVLGDTIQYLKKLEARVEELESYMD 265
           A N M      KK   R + +L+SV P   ++++ S+LGD + YLK+L  R+  L + ++
Sbjct: 285 AKNLMAERRRRKKLNDR-LYMLRSVVPKISKMDRASILGDAVDYLKELLQRINNLHNELE 343

Query: 266 TTATGARTRRKCPDVQEQISDSYGPSNIYMGMKKSRINKRKACDIDDIDTGLDMIVSEED 325
           +T  G+        +Q   S S+ P          R+        +D+  G D++  +  
Sbjct: 344 STPPGSL-------LQPSASASFHPLTPTPPTLPCRVK-------EDLYPG-DLLSPKNQ 388

Query: 326 KPLDVKVNMKE-EEVLIEMKCPYREYILYDIMDAISNLHIDAHTVDSSTADG 376
            P  V+V ++E   V I M C  R  +L   M A+ NL +D      S  +G
Sbjct: 389 SP-KVEVRVREGRAVNIHMFCTRRPGLLLSTMRALDNLGLDVQQAVISCFNG 439


>Medtr7g083900.1 | basic helix loop helix protein BHLH23 | HC |
           chr7:32316216-32319242 | 20130731
          Length = 475

 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 78/172 (45%), Gaps = 18/172 (10%)

Query: 206 ADNFMGNVFSDKKRESRNIQVLKSVAPSACEVEKISVLGDTIQYLKKLEARVEELESYMD 265
           A N M      KK   R + +L+SV P   ++++ S+LGD + YLK+L  R+  L + ++
Sbjct: 285 AKNLMAERRRRKKLNDR-LYMLRSVVPKISKMDRASILGDAVDYLKELLQRINNLHNELE 343

Query: 266 TTATGARTRRKCPDVQEQISDSYGPSNIYMGMKKSRINKRKACDIDDIDTGLDMIVSEED 325
           +T  G+        +Q   S S+ P          R+        +D+  G D++  +  
Sbjct: 344 STPPGSL-------LQPSASASFHPLTPTPPTLPCRVK-------EDLYPG-DLLSPKNQ 388

Query: 326 KPLDVKVNMKE-EEVLIEMKCPYREYILYDIMDAISNLHIDAHTVDSSTADG 376
            P  V+V ++E   V I M C  R  +L   M A+ NL +D      S  +G
Sbjct: 389 SP-KVEVRVREGRAVNIHMFCTRRPGLLLSTMRALDNLGLDVQQAVISCFNG 439