Miyakogusa Predicted Gene

Lj3g3v2317950.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2317950.1 tr|B9IGR3|B9IGR3_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_577157 PE=4
SV=1,22.66,0.000000000000004,Clavaminate synthase-like,NULL;
coiled-coil,NULL; DIOX_N,Non-haem dioxygenase N-terminal domain; no
,CUFF.43838.1
         (368 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g014330.1 | downstream target of agl15-4 protein | HC | ch...   464   e-131
Medtr7g072870.1 | downstream target of AGL15-4 protein, putative...    79   9e-15
Medtr7g072635.1 | downstream target of AGL15-4 protein, putative...    79   9e-15
Medtr2g437380.1 | 2OG-Fe(II) oxygenase family oxidoreductase | H...    52   1e-06

>Medtr8g014330.1 | downstream target of agl15-4 protein | HC |
           chr8:4470176-4467246 | 20130731
          Length = 369

 Score =  464 bits (1195), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 227/370 (61%), Positives = 277/370 (74%), Gaps = 3/370 (0%)

Query: 1   MPEIPVDFRAPPPSPVASGRRSSFTNEDILTEFLETSPRVPDLVLPDNIFPKQRHLESPP 60
           MPE  VDFRAPPPSPVASGRRS+ TN + LTEFLETS RVPDLVLPD IFPKQ + E+PP
Sbjct: 1   MPETTVDFRAPPPSPVASGRRSTVTNNEFLTEFLETSLRVPDLVLPDKIFPKQINDETPP 60

Query: 61  VVDFVSLCFHHDDALRDVVSRSMATIGCFQIINHGIPPQLITSVAQSAAGIFCVPLGNRA 120
            VDFV+LCFH D+ L DVV  S+A  GCFQ+INHGI P ++ +  + A GIF VP   R 
Sbjct: 61  KVDFVALCFHEDEDLIDVVLESIARFGCFQLINHGISPGIVAAAVEVAGGIFTVPPDMRD 120

Query: 121 AVTRSPEKPWGXXXXXXXXXXXXXXXXXXXXVWCE-DHEFKLKMEGILPRGYQNFSEKME 179
           AVTRSPEKP G                    +WC+ D E KLK+EGI P GY NFS+KME
Sbjct: 121 AVTRSPEKPRGFEEHDDEVEEKEGRELNEEFIWCKNDEELKLKLEGIWPIGYPNFSKKME 180

Query: 180 SLKTRVETVAEKILAVMLKNVARKFEGDVNVVRCGHEVGSVCCISKHCRD-DRSGRWGSS 238
           +L++RVE VAEKILA++LKNV +K   D +++  G+EVG++CCI KH +D +R+  W  S
Sbjct: 181 TLQSRVEKVAEKILAIILKNVTKKLASDGDIIGHGNEVGTLCCIYKHHQDINRNDHWVDS 240

Query: 239 LKYDVIRMLIRGADYYHSLCVHVCDGCSEFHVYSKKSWLSFYPEQGALIITGGDQTQILS 298
           LKYDVIRMLIRG DY HSLC+HVCDG SEFHVYSKKSWL+F PEQGAL+IT GDQ Q+LS
Sbjct: 241 LKYDVIRMLIRGTDYSHSLCLHVCDGSSEFHVYSKKSWLTFCPEQGALVITAGDQIQVLS 300

Query: 299 GGYYKHVIGRPIFQCEKEDNISMTFLYSPPNSENNFETYEERTITLGQQVIMAIVLTLMY 358
           GG+YK VIG+ IF+ ++EDNISM FLYSP NS+   +T  ER I+LGQQ I+ ++L LMY
Sbjct: 301 GGHYKDVIGKAIFKGKREDNISMAFLYSPQNSK-KLQTNMERPISLGQQAILVVILNLMY 359

Query: 359 HVLIYGYQNI 368
           HVLI+ ++ +
Sbjct: 360 HVLIFVFKKV 369


>Medtr7g072870.1 | downstream target of AGL15-4 protein, putative |
           HC | chr7:27193120-27196086 | 20130731
          Length = 331

 Score = 78.6 bits (192), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 78/360 (21%), Positives = 156/360 (43%), Gaps = 51/360 (14%)

Query: 10  APPPSPVASGRRSSFTNEDILTEFLETSPRVPDLVLPDNIFPKQRHLESPPVVDFVSLCF 69
           AP PSP+ +GR S     D+  +FLE   ++P+L LP++  P      SP  +D   L  
Sbjct: 14  APLPSPIPTGRGSRSAANDVFIQFLEEKLQLPELTLPESHIPP-----SPAEIDLRFL-- 66

Query: 70  HHDDALRDVVSRSMATIGCFQIINHGIPPQLITSVAQSAAGIFCVPLGNRAAVTRSPEKP 129
               A   ++ RS+   G F+I +HGI    + ++A+ + G+F      +  V R+    
Sbjct: 67  --PHASAGMLLRSVKEFGAFRIRSHGISGNELETIAEESEGVF--KDAKKVYVERN---- 118

Query: 130 WGXXXXXXXXXXXXXXXXXXXXVWCEDHEFKLKMEGILPRGYQNFSEKMESLKTRVETVA 189
                                 V   +   +        + ++ F   M ++ +R++ + 
Sbjct: 119 -------------GRCGGMIPCVRSSNGAMEFTAHN---QKHRKFWVHMGNVASRLDNIV 162

Query: 190 EKILAVMLKNVARKFEGDVNVVRCGHEVGSVCCISKHCRDDRSGRWGSSLKYDVIRMLIR 249
           E++   + ++ ++ F+  +       E  SV C+ ++  D+   R       + +  L +
Sbjct: 163 EQVTLALQQDTSQDFKERI------QETESVICLCRYPHDNTPKR------NERVSGLTK 210

Query: 250 GADYYHSLCVHVCDGCSEFHVYSKKSWLSFYPEQGALIITGGDQTQILSGGYYKHVIGR- 308
           G    H+L  ++      F+V +++  LSF      +++T G Q +  S   +K+V G  
Sbjct: 211 GILSEHALRFYLPMEHCIFYVQTERGPLSFDAGPEHIVVTVGKQLEDWSNNVFKYVPGEM 270

Query: 309 ---PIFQCEKED--NISMTFLYSPPNSENNFETYEERTITLGQQVIMAIVLTLMYHVLIY 363
              P FQ   +   +I +T L SP  ++N+     ++ I+L  Q+++ + L  +Y  L +
Sbjct: 271 IFMPSFQSSNDASFSIELTCLVSP--NQNHILNNYDKIISLNDQILIVLCLVFLYKFLYF 328


>Medtr7g072635.1 | downstream target of AGL15-4 protein, putative |
           HC | chr7:27085879-27081967 | 20130731
          Length = 331

 Score = 78.6 bits (192), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 78/360 (21%), Positives = 156/360 (43%), Gaps = 51/360 (14%)

Query: 10  APPPSPVASGRRSSFTNEDILTEFLETSPRVPDLVLPDNIFPKQRHLESPPVVDFVSLCF 69
           AP PSP+ +GR S     D+  +FLE   ++P+L LP++  P      SP  +D   L  
Sbjct: 14  APLPSPIPTGRGSRSAANDVFIQFLEEKLQLPELTLPESHIPP-----SPAEIDLRFL-- 66

Query: 70  HHDDALRDVVSRSMATIGCFQIINHGIPPQLITSVAQSAAGIFCVPLGNRAAVTRSPEKP 129
               A   ++ RS+   G F+I +HGI    + ++A+ + G+F      +  V R+    
Sbjct: 67  --PHASAGMLLRSVKEFGAFRIRSHGISGNELETIAEESEGVF--KDAKKVYVERN---- 118

Query: 130 WGXXXXXXXXXXXXXXXXXXXXVWCEDHEFKLKMEGILPRGYQNFSEKMESLKTRVETVA 189
                                 V   +   +        + ++ F   M ++ +R++ + 
Sbjct: 119 -------------GRCGGMIPCVRSSNGAMEFTAHN---QKHRKFWVHMGNVASRLDNIV 162

Query: 190 EKILAVMLKNVARKFEGDVNVVRCGHEVGSVCCISKHCRDDRSGRWGSSLKYDVIRMLIR 249
           E++   + ++ ++ F+  +       E  SV C+ ++  D+   R       + +  L +
Sbjct: 163 EQVTLALQQDTSQDFKERI------QETESVICLCRYPHDNTPKR------NERVSGLTK 210

Query: 250 GADYYHSLCVHVCDGCSEFHVYSKKSWLSFYPEQGALIITGGDQTQILSGGYYKHVIGR- 308
           G    H+L  ++      F+V +++  LSF      +++T G Q +  S   +K+V G  
Sbjct: 211 GILSEHALRFYLPMEHCIFYVQTERGPLSFDAGPEHIVVTVGKQLEDWSNNVFKYVPGEM 270

Query: 309 ---PIFQCEKED--NISMTFLYSPPNSENNFETYEERTITLGQQVIMAIVLTLMYHVLIY 363
              P FQ   +   +I +T L SP  ++N+     ++ I+L  Q+++ + L  +Y  L +
Sbjct: 271 IFMPSFQSSNDASFSIELTCLVSP--NQNHILNNYDKIISLNDQILIVLCLVFLYKFLYF 328


>Medtr2g437380.1 | 2OG-Fe(II) oxygenase family oxidoreductase | HC |
           chr2:14666094-14668477 | 20130731
          Length = 363

 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/272 (19%), Positives = 104/272 (38%), Gaps = 19/272 (6%)

Query: 60  PVVDFVSLCFHHDDALRDVVSR---SMATIGCFQIINHGIPPQLITSVAQSAAGIFCVPL 116
           PV+DF      + + + + +S+   +    G FQ+INH I   L+ ++   +   F +PL
Sbjct: 51  PVIDFSKFSKGNKEEVFNELSKLSTACEEWGFFQVINHEIDLNLMENIEDMSREFFMLPL 110

Query: 117 GNRAAVTRSPEKPWGXXXXXXXXXXXXXXXXXXXXVWCEDHEFKLKMEGILPRGYQNFSE 176
             +     +P    G                    +  E H   ++   + P+     SE
Sbjct: 111 DEKQKYPMAPGTVQGYGQAFVFSEDQKLDWCNMFALGIEPH--YIRNSNLWPKKPARLSE 168

Query: 177 KMESLKTRVETVAEKILAVMLKNVARKFEGDVNVVRCGHEVGSVCCISKHCRDDRSGRWG 236
            +E    ++  + + +L  +   ++   E DV     G  V ++          R   + 
Sbjct: 169 TIELYSRKIRKLCQNLLKYIALGLS--LEEDVFEKMFGEAVQAI----------RMNYYP 216

Query: 237 SSLKYDVIRMLIRGADYYHSLCVHVCDGCS-EFHVYSKKSWLSFYPEQGALIITGGDQTQ 295
           +  + D++  L   +D      +    G      +    +W+   P   AL+I  GD  +
Sbjct: 217 TCSRPDLVLGLSPHSDGSALTVLQQAKGSPVGLQILKDNTWVPVEPISNALVINIGDTIE 276

Query: 296 ILSGGYYKHVIGRPIFQCEKEDNISMTFLYSP 327
           +L+ G YK V  R +   EK D +S+   Y+P
Sbjct: 277 VLTNGKYKSVEHRAVAHEEK-DRLSIVTFYAP 307