Miyakogusa Predicted Gene

Lj3g3v2315250.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2315250.1 Non Characterized Hit- tr|D7KIP1|D7KIP1_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,71.79,0.00000003, ,CUFF.43781.1
         (334 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g013830.1 | transmembrane protein, putative | HC | chr8:42...   620   e-178
Medtr8g013830.2 | transmembrane protein, putative | HC | chr8:42...   463   e-131
Medtr8g013830.3 | transmembrane protein, putative | HC | chr8:42...   463   e-131
Medtr8g013830.4 | transmembrane protein, putative | HC | chr8:42...   463   e-131

>Medtr8g013830.1 | transmembrane protein, putative | HC |
           chr8:4251719-4248060 | 20130731
          Length = 354

 Score =  620 bits (1599), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 294/332 (88%), Positives = 311/332 (93%)

Query: 2   VNSGDGVDESYRALPSLYLTFLSIWFLSACSWTAYTYKTRHFQWNNLQWALTVVPLIKAL 61
           ++SGDGVDESYR+LPSLYLTFLSIWF+SACSWTAYTYKTRHFQWNNLQWALT +PLIKAL
Sbjct: 1   MSSGDGVDESYRSLPSLYLTFLSIWFVSACSWTAYTYKTRHFQWNNLQWALTSIPLIKAL 60

Query: 62  QLMLSFLFWYSCFNYQTCSLWMSFGVYVTGVLFQTAAFVSFLLISHGYCIMCERLSLSER 121
           QLMLSFLFWYSCFN+Q CSLWMSFGVYVTGVLFQTAAFVSFLLI+HGYCIMCE LSL+ER
Sbjct: 61  QLMLSFLFWYSCFNFQACSLWMSFGVYVTGVLFQTAAFVSFLLIAHGYCIMCEHLSLNER 120

Query: 122 RSTAALACVFYLTLVGYKASVPYFTVLLLLNYVISFYIIFHHISQNLLVLREQLSIIVND 181
           RSTAALACVFYLTLVGYKASVPYFTVLLLLNY ISFY+IFHHISQNLLVLREQL II N+
Sbjct: 121 RSTAALACVFYLTLVGYKASVPYFTVLLLLNYFISFYVIFHHISQNLLVLREQLGIIENE 180

Query: 182 DVQAMHDAVYKKYIMFKKFQGAMQMVAMAETMIYMNMDDSSQNYWLRLLIREWVQFCIFG 241
           DV+AMHDAVYKKYIMFKKFQGAMQMVAMAETMIYMN+ DSS+NYWLRLLIREW QFCIF 
Sbjct: 181 DVRAMHDAVYKKYIMFKKFQGAMQMVAMAETMIYMNIYDSSENYWLRLLIREWTQFCIFV 240

Query: 242 YIGWIFRSQDLAPHFSVMPTTKCKGETLVPPIYSLEMDASTFKEFSSHEWHIGVPTCTFH 301
           YIGWIFRSQDLAPHFSVMP TK KG TLVPPIYS+EMDA+TFKEFSSHEWHIG+PT T H
Sbjct: 241 YIGWIFRSQDLAPHFSVMPATKSKGVTLVPPIYSIEMDAATFKEFSSHEWHIGLPTSTRH 300

Query: 302 DESSKKDVLVIIQHPRAQRLRKLDAFSQSANC 333
           DE SK +VLVIIQHP AQR RKLDA S S NC
Sbjct: 301 DECSKNEVLVIIQHPSAQRPRKLDAISDSTNC 332


>Medtr8g013830.2 | transmembrane protein, putative | HC |
           chr8:4251656-4248251 | 20130731
          Length = 273

 Score =  463 bits (1192), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 221/251 (88%), Positives = 232/251 (92%)

Query: 83  MSFGVYVTGVLFQTAAFVSFLLISHGYCIMCERLSLSERRSTAALACVFYLTLVGYKASV 142
           MSFGVYVTGVLFQTAAFVSFLLI+HGYCIMCE LSL+ERRSTAALACVFYLTLVGYKASV
Sbjct: 1   MSFGVYVTGVLFQTAAFVSFLLIAHGYCIMCEHLSLNERRSTAALACVFYLTLVGYKASV 60

Query: 143 PYFTVLLLLNYVISFYIIFHHISQNLLVLREQLSIIVNDDVQAMHDAVYKKYIMFKKFQG 202
           PYFTVLLLLNY ISFY+IFHHISQNLLVLREQL II N+DV+AMHDAVYKKYIMFKKFQG
Sbjct: 61  PYFTVLLLLNYFISFYVIFHHISQNLLVLREQLGIIENEDVRAMHDAVYKKYIMFKKFQG 120

Query: 203 AMQMVAMAETMIYMNMDDSSQNYWLRLLIREWVQFCIFGYIGWIFRSQDLAPHFSVMPTT 262
           AMQMVAMAETMIYMN+ DSS+NYWLRLLIREW QFCIF YIGWIFRSQDLAPHFSVMP T
Sbjct: 121 AMQMVAMAETMIYMNIYDSSENYWLRLLIREWTQFCIFVYIGWIFRSQDLAPHFSVMPAT 180

Query: 263 KCKGETLVPPIYSLEMDASTFKEFSSHEWHIGVPTCTFHDESSKKDVLVIIQHPRAQRLR 322
           K KG TLVPPIYS+EMDA+TFKEFSSHEWHIG+PT T HDE SK +VLVIIQHP AQR R
Sbjct: 181 KSKGVTLVPPIYSIEMDAATFKEFSSHEWHIGLPTSTRHDECSKNEVLVIIQHPSAQRPR 240

Query: 323 KLDAFSQSANC 333
           KLDA S S NC
Sbjct: 241 KLDAISDSTNC 251


>Medtr8g013830.3 | transmembrane protein, putative | HC |
           chr8:4251719-4248060 | 20130731
          Length = 273

 Score =  463 bits (1192), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 221/251 (88%), Positives = 232/251 (92%)

Query: 83  MSFGVYVTGVLFQTAAFVSFLLISHGYCIMCERLSLSERRSTAALACVFYLTLVGYKASV 142
           MSFGVYVTGVLFQTAAFVSFLLI+HGYCIMCE LSL+ERRSTAALACVFYLTLVGYKASV
Sbjct: 1   MSFGVYVTGVLFQTAAFVSFLLIAHGYCIMCEHLSLNERRSTAALACVFYLTLVGYKASV 60

Query: 143 PYFTVLLLLNYVISFYIIFHHISQNLLVLREQLSIIVNDDVQAMHDAVYKKYIMFKKFQG 202
           PYFTVLLLLNY ISFY+IFHHISQNLLVLREQL II N+DV+AMHDAVYKKYIMFKKFQG
Sbjct: 61  PYFTVLLLLNYFISFYVIFHHISQNLLVLREQLGIIENEDVRAMHDAVYKKYIMFKKFQG 120

Query: 203 AMQMVAMAETMIYMNMDDSSQNYWLRLLIREWVQFCIFGYIGWIFRSQDLAPHFSVMPTT 262
           AMQMVAMAETMIYMN+ DSS+NYWLRLLIREW QFCIF YIGWIFRSQDLAPHFSVMP T
Sbjct: 121 AMQMVAMAETMIYMNIYDSSENYWLRLLIREWTQFCIFVYIGWIFRSQDLAPHFSVMPAT 180

Query: 263 KCKGETLVPPIYSLEMDASTFKEFSSHEWHIGVPTCTFHDESSKKDVLVIIQHPRAQRLR 322
           K KG TLVPPIYS+EMDA+TFKEFSSHEWHIG+PT T HDE SK +VLVIIQHP AQR R
Sbjct: 181 KSKGVTLVPPIYSIEMDAATFKEFSSHEWHIGLPTSTRHDECSKNEVLVIIQHPSAQRPR 240

Query: 323 KLDAFSQSANC 333
           KLDA S S NC
Sbjct: 241 KLDAISDSTNC 251


>Medtr8g013830.4 | transmembrane protein, putative | HC |
           chr8:4251719-4248060 | 20130731
          Length = 273

 Score =  463 bits (1192), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 221/251 (88%), Positives = 232/251 (92%)

Query: 83  MSFGVYVTGVLFQTAAFVSFLLISHGYCIMCERLSLSERRSTAALACVFYLTLVGYKASV 142
           MSFGVYVTGVLFQTAAFVSFLLI+HGYCIMCE LSL+ERRSTAALACVFYLTLVGYKASV
Sbjct: 1   MSFGVYVTGVLFQTAAFVSFLLIAHGYCIMCEHLSLNERRSTAALACVFYLTLVGYKASV 60

Query: 143 PYFTVLLLLNYVISFYIIFHHISQNLLVLREQLSIIVNDDVQAMHDAVYKKYIMFKKFQG 202
           PYFTVLLLLNY ISFY+IFHHISQNLLVLREQL II N+DV+AMHDAVYKKYIMFKKFQG
Sbjct: 61  PYFTVLLLLNYFISFYVIFHHISQNLLVLREQLGIIENEDVRAMHDAVYKKYIMFKKFQG 120

Query: 203 AMQMVAMAETMIYMNMDDSSQNYWLRLLIREWVQFCIFGYIGWIFRSQDLAPHFSVMPTT 262
           AMQMVAMAETMIYMN+ DSS+NYWLRLLIREW QFCIF YIGWIFRSQDLAPHFSVMP T
Sbjct: 121 AMQMVAMAETMIYMNIYDSSENYWLRLLIREWTQFCIFVYIGWIFRSQDLAPHFSVMPAT 180

Query: 263 KCKGETLVPPIYSLEMDASTFKEFSSHEWHIGVPTCTFHDESSKKDVLVIIQHPRAQRLR 322
           K KG TLVPPIYS+EMDA+TFKEFSSHEWHIG+PT T HDE SK +VLVIIQHP AQR R
Sbjct: 181 KSKGVTLVPPIYSIEMDAATFKEFSSHEWHIGLPTSTRHDECSKNEVLVIIQHPSAQRPR 240

Query: 323 KLDAFSQSANC 333
           KLDA S S NC
Sbjct: 241 KLDAISDSTNC 251