Miyakogusa Predicted Gene

Lj3g3v2315220.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2315220.1 Non Characterized Hit- tr|I1KGL0|I1KGL0_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,84.05,0,seg,NULL;
Domain present in VPS-27, Hrs and STAM,VHS subgroup; no
description,Armadillo-like helical,CUFF.43780.1
         (699 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g013720.1 | VHS domain plant protein | HC | chr8:4209150-4...  1090   0.0  

>Medtr8g013720.1 | VHS domain plant protein | HC |
           chr8:4209150-4213969 | 20130731
          Length = 709

 Score = 1090 bits (2819), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 558/711 (78%), Positives = 611/711 (85%), Gaps = 14/711 (1%)

Query: 1   METSRRAVESYWRSRLIDSATADEDKVTPVYKLEEICELLRSSHASIVKEVSEFVLKRLE 60
           METSRRAVESYWRSRLIDSAT+DEDKV PVYKLEEICELLRSSH SIVKEVS+FVLKRL+
Sbjct: 1   METSRRAVESYWRSRLIDSATSDEDKVAPVYKLEEICELLRSSHVSIVKEVSDFVLKRLD 60

Query: 61  HKSPIVKQKALRLIKYVVGKSGVEFRREMQRHSVAVRQLFHYKGQLDPLKGDALNKAVRD 120
           HKSPIVKQKALRLIKY VGKSG EFRREMQRHSVA+RQL H+KGQLDPLKGDALNKAVR+
Sbjct: 61  HKSPIVKQKALRLIKYAVGKSGAEFRREMQRHSVAIRQLLHHKGQLDPLKGDALNKAVRE 120

Query: 121 TAQEAISAIFSEEN-----KAVPAPSEDVNRRIQGFGNTNYEMPSEDKKSFISEVVGMGS 175
           TAQEA+SAIFSEEN     KA  APS+D+NRRIQGFGNTNYE P ED KSFISEVVG+GS
Sbjct: 121 TAQEAVSAIFSEENSNNNYKAAAAPSQDLNRRIQGFGNTNYEPPPEDIKSFISEVVGIGS 180

Query: 176 ASIKQGLSNLTQGHSLMKNETGS--YRSPNLQRSLTNEREHGDRYEPVAYRNETQSSFGL 233
           ASIKQGL +LTQGHSLMKNETGS  Y+SP +QRSLT E E GDRYEPVAYR+ETQSSFGL
Sbjct: 181 ASIKQGLHSLTQGHSLMKNETGSGNYKSP-IQRSLTVESERGDRYEPVAYRSETQSSFGL 239

Query: 234 SRNQSSGPWNQDSRVNKVEISNGESSANHSESKTREERLVESIVTSGGVRLQPTRDAIQV 293
            +NQSSG WNQDSRVNK++ISNGESS N SE KTRE+RL+E+IVTSGGVRLQP+RDAIQ 
Sbjct: 240 PKNQSSGSWNQDSRVNKMDISNGESSGNSSEIKTREDRLLETIVTSGGVRLQPSRDAIQA 299

Query: 294 FLTEAAKLDALALSHALELKLQSPIWQVRMKAVCVLDSILRKKDDDHFSLVESYFTENKD 353
           F+TEAAKLDALALSHALELKLQSPIWQVRMKAVCVL+SILRKKDDDHFS V SYFTENKD
Sbjct: 300 FITEAAKLDALALSHALELKLQSPIWQVRMKAVCVLESILRKKDDDHFSHVASYFTENKD 359

Query: 354 VVLRCSESPQASLREKAVKVLGLLGGIQPNSFAINSEKAVKTESAIVAELPDLIDTGDSS 413
           VVLRCSESPQASLREKA+KVL LLGG QPNS +INSEKAVKT +A VAELPDLIDTG S+
Sbjct: 360 VVLRCSESPQASLREKAIKVLSLLGGDQPNS-SINSEKAVKTGTATVAELPDLIDTGYSN 418

Query: 414 DYLRTDDXXXXXXXXXXXXXXXXXXLVDDLFGDFSGSNGASHELKNDDDPFADVSFHASE 473
           D    D+                  LVDDLFGD SGS  ASHELKNDDDPFADVSFH  E
Sbjct: 419 DDNLMDNSTNSIDEQNIGNLTSSTPLVDDLFGDISGSIRASHELKNDDDPFADVSFHTGE 478

Query: 474 KKGHADDLFSGMTVGGDKQGDNANHVLGNKSDPELFDIFASNSEQGNKE-FVGDLMAGLS 532
            K HADDLFSGMTVG DKQGD+ +   G +SDP+LFD+F S+S+QGN    V DLM GLS
Sbjct: 479 SKEHADDLFSGMTVGDDKQGDHESRKQGIQSDPQLFDLFGSSSKQGNHNGSVSDLMGGLS 538

Query: 533 IDENTSSTKQKGTSPTLESESLFTGLNNHIPD-NTSGGMLGS--QPLGFNVNPMFPAGSL 589
           IDENTSSTK KGTS T++SESLF+GLNNH  D NT GGMLGS  QP+GFNVNPMFP G +
Sbjct: 539 IDENTSSTKPKGTSSTVQSESLFSGLNNHTLDNNTLGGMLGSQAQPIGFNVNPMFPTGHM 598

Query: 590 PYNIQPGVMLNHPYTSQPLNYGAMGTLLAQQQFLATMANFQHLSNVNMRDDGVAQIAGPN 649
           PYN+ PG+MLN PY +QPLNYGAMGT+LAQQQ LATMANFQH+SNVNMRD GV+Q+ GPN
Sbjct: 599 PYNMPPGIMLNQPYPTQPLNYGAMGTILAQQQLLATMANFQHISNVNMRDGGVSQMVGPN 658

Query: 650 GRTPIPDIFQPGFSPQTPSSMINSSKKED-TKAFDFISDHLASSRDSRRVI 699
           G +P+PDIFQP  + QTP S+IN+SKKED TKAFDFISDHLAS+RDSRRVI
Sbjct: 659 GASPLPDIFQPNLTSQTPGSIINNSKKEDNTKAFDFISDHLASARDSRRVI 709