Miyakogusa Predicted Gene

Lj3g3v2225730.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2225730.1 Non Characterized Hit- tr|I1PXJ7|I1PXJ7_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4
SV=1,45.61,4e-19,coiled-coil,NULL; LATE EMBRYOGENESIS ABUNDANT
PROTEIN, PUTATIVE / LEA PROTEIN, PUTATIVE,NULL; LATE E,CUFF.43689.1
         (164 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g011230.1 | late embryogenesis abundant protein group 3 pr...   130   7e-31
Medtr4g011250.1 | late embryogenesis abundant protein group 3 pr...   125   2e-29
Medtr4g011270.1 | late embryogenesis abundant protein group 3, p...   116   8e-27
Medtr1g045980.1 | late embryogenesis abundant protein group 3 pr...    49   3e-06
Medtr1g045950.1 | late embryogenesis abundant protein group 3 pr...    47   6e-06

>Medtr4g011230.1 | late embryogenesis abundant protein group 3
           protein | HC | chr4:2666199-2667490 | 20130731
          Length = 164

 Score =  130 bits (326), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 71/150 (47%), Positives = 85/150 (56%)

Query: 1   MASHDQSYRAGETMGRTEEKGNQMMGNIGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MASHDQSY+AGETMGRTEEK NQMMGNIG+                              
Sbjct: 1   MASHDQSYKAGETMGRTEEKSNQMMGNIGDKAQAAKEKVQQTAQAAKEKTGQTAQAAKEK 60

Query: 61  XXXXXXXXXXXXXXXXHSTGDRTQQTAQAGKQRASEMGQATRESAQAGNDNTGGFMQQTG 120
                            +T D+TQ T    + +  EMGQAT+E+AQ+G DN+ GF+QQTG
Sbjct: 61  TQETAQAAKDKTQQAAQATKDKTQDTTGQARDKGYEMGQATKETAQSGKDNSAGFLQQTG 120

Query: 121 EKVKDMAQGATEAVKSTLGMGQKDETKEHV 150
           EKVK MAQGATEAVK+TLGM   +E K+H 
Sbjct: 121 EKVKGMAQGATEAVKNTLGMNNDEEDKDHF 150


>Medtr4g011250.1 | late embryogenesis abundant protein group 3
           protein | HC | chr4:2675285-2676547 | 20130731
          Length = 164

 Score =  125 bits (313), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 69/150 (46%), Positives = 84/150 (56%)

Query: 1   MASHDQSYRAGETMGRTEEKGNQMMGNIGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MAS DQS++AGETMGRTEEK NQMMGNIG+                              
Sbjct: 1   MASQDQSFKAGETMGRTEEKSNQMMGNIGDKAQAAKEKVQQTAQAAKEKTGQTAQAAKEK 60

Query: 61  XXXXXXXXXXXXXXXXHSTGDRTQQTAQAGKQRASEMGQATRESAQAGNDNTGGFMQQTG 120
                            +T D+TQ T    + +  EMGQAT+E+AQ+G DN+ GF+QQTG
Sbjct: 61  TQETAQAVKDKTQQTAQATKDKTQDTTGQARDKGYEMGQATKETAQSGKDNSAGFLQQTG 120

Query: 121 EKVKDMAQGATEAVKSTLGMGQKDETKEHV 150
           EKVK MAQGATEAVK+TLGM   +E K+H 
Sbjct: 121 EKVKGMAQGATEAVKNTLGMNNDEEDKDHF 150


>Medtr4g011270.1 | late embryogenesis abundant protein group 3,
           putative | HC | chr4:2681610-2682501 | 20130731
          Length = 133

 Score =  116 bits (291), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 69/161 (42%), Positives = 89/161 (55%), Gaps = 44/161 (27%)

Query: 1   MASHDQSYRAGETMGRTEEKGNQMMGNIGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MASH+QSY+AGETMGRTEEK NQMMGN+G+                              
Sbjct: 1   MASHNQSYKAGETMGRTEEKSNQMMGNVGDKAQAAKEKVQQTA----------------- 43

Query: 61  XXXXXXXXXXXXXXXXHSTGDRTQQTAQAGKQRA-----------SEMGQATRESAQAGN 109
                            +  ++TQQ AQA K++A           SE+GQ+T+E+AQ+G 
Sbjct: 44  ----------------QAAKEKTQQAAQATKEKAQDTTGQAREKGSEIGQSTKETAQSGK 87

Query: 110 DNTGGFMQQTGEKVKDMAQGATEAVKSTLGMGQKDETKEHV 150
           DN+ GF+QQTGEKVK MAQ ATEAVK+T GM   +E K+H+
Sbjct: 88  DNSAGFLQQTGEKVKGMAQSATEAVKNTFGMAHDEEDKDHI 128


>Medtr1g045980.1 | late embryogenesis abundant protein group 3
           protein | HC | chr1:17320817-17319777 | 20130731
          Length = 154

 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 21/28 (75%), Positives = 25/28 (89%)

Query: 113 GGFMQQTGEKVKDMAQGATEAVKSTLGM 140
            GF+QQTGE+VK+MAQGA E+VK TLGM
Sbjct: 106 AGFLQQTGEQVKNMAQGAVESVKHTLGM 133


>Medtr1g045950.1 | late embryogenesis abundant protein group 3
           protein, putative | LC | chr1:17309200-17308218 |
           20130731
          Length = 194

 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 20/29 (68%), Positives = 26/29 (89%)

Query: 112 TGGFMQQTGEKVKDMAQGATEAVKSTLGM 140
           + GF+QQTGE++K+MAQGA E+VK TLGM
Sbjct: 145 SAGFLQQTGEQMKNMAQGAVESVKHTLGM 173