Miyakogusa Predicted Gene

Lj3g3v2224710.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2224710.1 Non Characterized Hit- tr|E0T2V0|E0T2V0_EDWTF
Putative aspartate racemase OS=Edwardsiella tarda
(str,27.24,1e-16,Aspartate/glutamate racemase,Asp/Glu racemase; no
description,Asp/Glu racemase; seg,NULL; Asp_Glu_ra,CUFF.43687.1
         (304 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g103300.1 | aspartate racemase | HC | chr2:44461907-444594...   370   e-103
Medtr4g114000.1 | aspartate racemase | HC | chr4:46911085-469094...   244   7e-65

>Medtr2g103300.1 | aspartate racemase | HC | chr2:44461907-44459443
           | 20130731
          Length = 321

 Score =  370 bits (951), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 199/321 (61%), Positives = 226/321 (70%), Gaps = 35/321 (10%)

Query: 2   FKAILTPSFQTSCYFNPPRNPCK--------TTKSSIVVTACESGEFP------------ 41
           F +IL P+         PR  CK        T  SS+++ A ESG+F             
Sbjct: 16  FVSILNPNLN-------PRYLCKSRSWKVLSTPPSSVILNADESGKFSKNLVGSVRNDSV 68

Query: 42  TPLVTLPNXXXXXXXXXXNATLKFLRKLMEFSSEDGGNAPPFVICSDPLLSKELLSYERS 101
           +P                +ATL FLRKL+E SS+DG N  PF++CSDP+L+KELLSYERS
Sbjct: 69  SPFGYQGTTVGIIGGMSVDATLNFLRKLVELSSQDGQNPIPFLLCSDPILNKELLSYERS 128

Query: 102 YLVSSTSEVEGLKLDTSSIVQSLMSKRGFLECSGARCVVMPCHVSHSWYEEVSKGCSVPF 161
                   +E  K+D+S IVQSL +KR FLE SGARC+VMPC+VSHSWYE+VS GCSVPF
Sbjct: 129 --------LESFKVDSSQIVQSLRNKRVFLENSGARCIVMPCNVSHSWYEQVSIGCSVPF 180

Query: 162 LHMAECVARRLKDAKLKPLEAGNPLRIGVLATNATLAAGFYQEKLQNEGFEVVLPDRATM 221
           LHMAECVA+ LK+AKLKPLEAG+PLRIGVLATNATLAAGFY+EKLQNEGFEV+LPDRATM
Sbjct: 181 LHMAECVAKELKEAKLKPLEAGSPLRIGVLATNATLAAGFYKEKLQNEGFEVILPDRATM 240

Query: 222 EHTVIPAIEALDRKDMEGACNLFRIALQVLLVRAVNSVILASDDMRXXXXXXXXXXXXCI 281
           EHTVIPA EAL RKDMEGACNL RIALQVLLVRAVN VILASD+MR            CI
Sbjct: 241 EHTVIPATEALSRKDMEGACNLLRIALQVLLVRAVNFVILASDEMRDVLPHDDPLLKKCI 300

Query: 282 DPMDALAWSTIKWARSSEDNT 302
           DPMDALA STIKW RS  DNT
Sbjct: 301 DPMDALARSTIKWVRSCGDNT 321


>Medtr4g114000.1 | aspartate racemase | HC | chr4:46911085-46909437
           | 20130731
          Length = 333

 Score =  244 bits (623), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 119/238 (50%), Positives = 168/238 (70%), Gaps = 2/238 (0%)

Query: 61  ATLKFLRKLMEFSSEDGGNAPPFVICSDPLLSKELLSYERSYLVSSTSEVEGLKLDTSSI 120
           +TL FL KL  +SS +G   PPFV+CSDP+LSK L    R    S+ + ++ ++L+   +
Sbjct: 91  STLVFLEKLACWSSRNGKECPPFVVCSDPVLSKAL--SLRGSFPSTRTRIDHIELNQELM 148

Query: 121 VQSLMSKRGFLECSGARCVVMPCHVSHSWYEEVSKGCSVPFLHMAECVARRLKDAKLKPL 180
           +Q+L  K   L+ SGAR + +PCH+SH+W++E+SK  S+PFLH+ +CVA  LK+AK+KP+
Sbjct: 149 IQNLRHKINVLQQSGARGLALPCHLSHAWHKEISKDSSLPFLHVGDCVAMELKNAKMKPI 208

Query: 181 EAGNPLRIGVLATNATLAAGFYQEKLQNEGFEVVLPDRATMEHTVIPAIEALDRKDMEGA 240
            A + +RIG+L T+++    +Y+EKLQ++GFEVVL D+AT EH ++PA++AL RKD+EGA
Sbjct: 209 HATSTVRIGLLTTDSSFVVCYYKEKLQSQGFEVVLLDKATEEHILVPAVDALQRKDIEGA 268

Query: 241 CNLFRIALQVLLVRAVNSVILASDDMRXXXXXXXXXXXXCIDPMDALAWSTIKWARSS 298
            NL RIA+ VLLVR VN VILASDD+             CIDPMDALA S I WA ++
Sbjct: 269 RNLLRIAIHVLLVRGVNVVILASDDLLGILPHNDPLLKKCIDPMDALARSIINWAETT 326