Miyakogusa Predicted Gene

Lj3g3v2213630.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2213630.1 tr|Q9SSC1|Q9SSC1_ARATH At1g80180/F18B13_26
OS=Arabidopsis thaliana GN=F18B13.26 PE=2 SV=1,46.43,4e-19,
,CUFF.43680.1
         (109 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g011060.1 | plant/F18B13-26 protein | HC | chr4:2600967-26...   134   2e-32
Medtr2g103380.1 | hypothetical protein | HC | chr2:44510060-4451...   117   2e-27
Medtr4g114050.1 | hypothetical protein | HC | chr4:46931403-4693...    91   2e-19

>Medtr4g011060.1 | plant/F18B13-26 protein | HC |
           chr4:2600967-2600575 | 20130731
          Length = 118

 Score =  134 bits (336), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 77/113 (68%), Positives = 87/113 (76%), Gaps = 13/113 (11%)

Query: 1   MAGLQRSEVSFRRQGSSGLVWDEKLLSGELNR-KEEGQDNKGSTDHQNVKELRT-TTVQR 58
           MAGL RSEVSFRR GSSGLVWD++ LSGELN+ K+E +DN       N KELR  TTVQR
Sbjct: 1   MAGLPRSEVSFRRSGSSGLVWDDRFLSGELNKLKQEEEDN----TTNNSKELRVKTTVQR 56

Query: 59  SRSNG---GYRTGRVSPAIDPPSPKLSACGFCAAFGKPTGDKGQRSKPGKPRT 108
           S S G   GYRTG+VSPAI+PPSPK+SACGFC+ FGK    KGQRSKPGK R+
Sbjct: 57  SHSTGAGRGYRTGKVSPAIEPPSPKVSACGFCSPFGK----KGQRSKPGKRRS 105


>Medtr2g103380.1 | hypothetical protein | HC |
           chr2:44510060-44511099 | 20130731
          Length = 118

 Score =  117 bits (293), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 65/122 (53%), Positives = 81/122 (66%), Gaps = 17/122 (13%)

Query: 1   MAGLQRSEVSFRRQGSSGLVWDEKLLSGELNRKEEGQDNKGSTDHQNVKELR-------- 52
           M GLQRS VSFRRQGSSG VWD++ L  E+N+  + Q+ +   D   +KE+         
Sbjct: 1   MEGLQRSAVSFRRQGSSGFVWDDRFLQEEINKMNQNQNQQEQEDKDEIKEMNRDATSPQL 60

Query: 53  --TTTVQRSRSNGG---YRTGRVSPAIDPPSPKLSACGFCAAFGKPTGDKGQRSKPGKPR 107
               TVQRSRSNGG   YRTG+VSPAI+PPSP++SACGFC AFGK     G++ KP K R
Sbjct: 61  GPINTVQRSRSNGGGRGYRTGKVSPAIEPPSPRISACGFCGAFGK----VGEKRKPPKHR 116

Query: 108 TR 109
           +R
Sbjct: 117 SR 118


>Medtr4g114050.1 | hypothetical protein | HC |
           chr4:46931403-46932287 | 20130731
          Length = 103

 Score = 90.9 bits (224), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 54/112 (48%), Positives = 69/112 (61%), Gaps = 16/112 (14%)

Query: 1   MAGLQRSEVSFRRQGSSGLVWDEKLLSGELNRKEEGQDNKGSTDHQNVKELRTTTVQRSR 60
           MA LQ+S  SFRRQGSSGLVWD+K LSG LN+ +  Q++             T T++RSR
Sbjct: 1   MAELQKSLASFRRQGSSGLVWDDKFLSG-LNQNQLEQESAS-----------TGTLERSR 48

Query: 61  SNGG--YRTGRVSP-AIDPPSPKLSACGFCAAFGKPTGDKGQRSKPGKPRTR 109
           S G   YR+  V+P +IDPPSPK++ CGFC  FGKP        K   P++R
Sbjct: 49  SAGARPYRSVNVAPTSIDPPSPKVATCGFCGLFGKPVAASSAH-KSNNPKSR 99