Miyakogusa Predicted Gene
- Lj3g3v2188170.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2188170.1 Non Characterized Hit- tr|G7JGZ0|G7JGZ0_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,70.73,1e-17,seg,NULL,CUFF.43654.1
(116 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g010270.2 | transmembrane protein, putative | HC | chr4:23... 85 2e-17
Medtr4g010270.1 | transmembrane protein, putative | HC | chr4:23... 85 2e-17
>Medtr4g010270.2 | transmembrane protein, putative | HC |
chr4:2318059-2312777 | 20130731
Length = 124
Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 38/42 (90%), Positives = 41/42 (97%)
Query: 75 SLSKLQDRVQIFFAVLFWMSLFFWASAWDGRNRPNKGSRFRR 116
SLSK QDRVQIFFAVLFWM+LFFWASAWDGRNRPNKGS+FR+
Sbjct: 83 SLSKFQDRVQIFFAVLFWMTLFFWASAWDGRNRPNKGSKFRK 124
>Medtr4g010270.1 | transmembrane protein, putative | HC |
chr4:2318059-2314977 | 20130731
Length = 124
Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 38/42 (90%), Positives = 41/42 (97%)
Query: 75 SLSKLQDRVQIFFAVLFWMSLFFWASAWDGRNRPNKGSRFRR 116
SLSK QDRVQIFFAVLFWM+LFFWASAWDGRNRPNKGS+FR+
Sbjct: 83 SLSKFQDRVQIFFAVLFWMTLFFWASAWDGRNRPNKGSKFRK 124