Miyakogusa Predicted Gene
- Lj3g3v2188150.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2188150.1 Non Characterized Hit- tr|D7SZP3|D7SZP3_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,41.18,2e-17,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; no description,Tetratricopeptide-like hel,CUFF.43655.1
(290 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g010250.1 | TPR repeat protein | HC | chr4:2308253-2305617... 257 9e-69
Medtr2g103795.1 | TPR repeat protein | HC | chr2:44688706-446946... 210 2e-54
Medtr4g114690.1 | TPR repeat protein | HC | chr4:47200290-472018... 164 1e-40
Medtr2g103795.2 | TPR repeat protein | HC | chr2:44688706-446901... 159 2e-39
Medtr7g098450.1 | TPR repeat protein | HC | chr7:39412668-394107... 123 2e-28
Medtr7g098450.2 | TPR repeat protein | HC | chr7:39412635-394103... 122 3e-28
Medtr7g099260.1 | TPR repeat protein | HC | chr7:39789340-397912... 120 2e-27
Medtr7g099260.2 | TPR repeat protein | HC | chr7:39789442-397912... 120 2e-27
Medtr5g029910.1 | TPR repeat protein | HC | chr5:12584803-125828... 119 3e-27
Medtr1g073230.1 | O-linked N-acetylglucosamine transferase, ogt ... 102 5e-22
Medtr3g463450.1 | TPR superfamily protein | HC | chr3:25403273-2... 84 2e-16
Medtr5g082130.1 | hypothetical protein | HC | chr5:35259864-3525... 75 9e-14
>Medtr4g010250.1 | TPR repeat protein | HC | chr4:2308253-2305617 |
20130731
Length = 253
Score = 257 bits (656), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 159/307 (51%), Positives = 181/307 (58%), Gaps = 71/307 (23%)
Query: 1 MLLRSSSAPILSSLT---------EPEHILHLPRTTSVLSLSQTLADINLQNSSSSFKKK 51
MLLRSSSAPILSSL E EH L LPRT S LSLSQ LA ++LQNSSS KK
Sbjct: 1 MLLRSSSAPILSSLLPYNSKESSLELEHTLKLPRTISFLSLSQNLAKLDLQNSSSP-KKP 59
Query: 52 NCVPRSHVLRNQHSSTKIKERNGVKDPQLKTSMKAQSSIQELLPSPGLDMGVVDHKKYGV 111
VP S+VL ST + E+N VK
Sbjct: 60 FLVPCSNVL-----STNMNEKNKVK----------------------------------- 79
Query: 112 GKEAKRLQTSVV--------XXXXXXXXXXXXXXXXWDFSEGSNHGRDKTDAYYQNMIEA 163
EAK +QTSV+ W+F++ HGRD+ DAYYQNMIEA
Sbjct: 80 --EAKMVQTSVMGGGVRSNGGCKGGGRGSDGGNGRGWNFND---HGRDRLDAYYQNMIEA 134
Query: 164 NPDDALLLGNYAKFLKEVRRDYTKAEEYLERAILASPGDGHTLSLYADLIWQTEKNADRA 223
+P DALLLGNY KFLKEV DY KAEE LERAILA+PGDGH +S+YADLIW+T+KNA RA
Sbjct: 135 HPCDALLLGNYGKFLKEVCGDYAKAEECLERAILANPGDGHVMSIYADLIWETKKNAARA 194
Query: 224 EQYFNQAVQSAPEDSYVLASYANFLWDAEDEEDKDSQNELDHSRNAYPNPTDLFQENNHH 283
+QYF+QA+QS P D YVLASYA FLWDAE+EEDKD Q + DH LFQE H
Sbjct: 195 QQYFDQAIQSDPNDCYVLASYAKFLWDAENEEDKDYQIKSDHMH--------LFQETKHC 246
Query: 284 PHLTAAS 290
P LTAAS
Sbjct: 247 PPLTAAS 253
>Medtr2g103795.1 | TPR repeat protein | HC | chr2:44688706-44694656
| 20130731
Length = 275
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 143/308 (46%), Positives = 173/308 (56%), Gaps = 53/308 (17%)
Query: 1 MLLRSSSAPILSSL--------TEPEHILHLPRTTSVLSLSQTLADINLQNSSSSFKKKN 52
MLLRS SAPI SS +E E HLPRT +S + K
Sbjct: 1 MLLRSYSAPIPSSFLPHSMESSSEQELNHHLPRTL------------------ASPRHKK 42
Query: 53 CVPRSHVLRNQHSSTKIKERNGVKDPQLKTSMKAQSSIQELLPSPGLDMGVVDHKKYGVG 112
P +L+N H +I+++ K K S++EL S LD V+ H + G
Sbjct: 43 TAP---LLKNHHQE-EIEQKFHKK--------KTTPSMRELFSSSSLDKQVLYHDE--GG 88
Query: 113 KEAKRLQTSV----------VXXXXXXXXXXXXXXXXWDFSEGSNHGRDKTDAYYQNMIE 162
K+ +LQT V +N+GRD+TDAYYQNMIE
Sbjct: 89 KKVGKLQTLVMGGGGMGCDGGSICGGCNGSGRDSGGGNGNGWENNYGRDETDAYYQNMIE 148
Query: 163 ANPDDALLLGNYAKFLKEVRRDYTKAEEYLERAILASPGDGHTLSLYADLIWQTEKNADR 222
ANP+++LLLGNYAKFLKEVR DY KAEEY+ERAILASP D LSLYADLIWQTEKNADR
Sbjct: 149 ANPNNSLLLGNYAKFLKEVRGDYGKAEEYVERAILASPSDADALSLYADLIWQTEKNADR 208
Query: 223 AEQYFNQAVQSAPEDSYVLASYANFLWDAEDEEDKDSQNELDHSRNAYPNPTDLFQENNH 282
AE YF++A+QS P D YVLASYA FLWDAE++ED D Q++ D S P DLF N
Sbjct: 209 AEAYFDRAIQSDPNDCYVLASYAKFLWDAEEDEDNDCQHKTDKSHTHSP---DLFLGANG 265
Query: 283 HPHLTAAS 290
H+TAAS
Sbjct: 266 RSHVTAAS 273
>Medtr4g114690.1 | TPR repeat protein | HC | chr4:47200290-47201853
| 20130731
Length = 292
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 74/104 (71%), Positives = 87/104 (83%)
Query: 146 SNHGRDKTDAYYQNMIEANPDDALLLGNYAKFLKEVRRDYTKAEEYLERAILASPGDGHT 205
SNHG D TD YY+ MIEANP + L LGNYAK+LKEVR+DY KAEEY RAILA+P DG+
Sbjct: 155 SNHGNDSTDLYYRTMIEANPGNPLFLGNYAKYLKEVRKDYVKAEEYCGRAILANPNDGNV 214
Query: 206 LSLYADLIWQTEKNADRAEQYFNQAVQSAPEDSYVLASYANFLW 249
LSLYADLIW+ K+A RAE YF+QAV++AP+D YVLASYA+FLW
Sbjct: 215 LSLYADLIWECHKDAPRAETYFDQAVKAAPDDCYVLASYAHFLW 258
>Medtr2g103795.2 | TPR repeat protein | HC | chr2:44688706-44690159
| 20130731
Length = 224
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/255 (44%), Positives = 140/255 (54%), Gaps = 50/255 (19%)
Query: 1 MLLRSSSAPILSSL--------TEPEHILHLPRTTSVLSLSQTLADINLQNSSSSFKKKN 52
MLLRS SAPI SS +E E HLPRT +S + K
Sbjct: 1 MLLRSYSAPIPSSFLPHSMESSSEQELNHHLPRTL------------------ASPRHKK 42
Query: 53 CVPRSHVLRNQHSSTKIKERNGVKDPQLKTSMKAQSSIQELLPSPGLDMGVVDHKKYGVG 112
P +L+N H +I+++ K K S++EL S LD V+ H + G
Sbjct: 43 TAP---LLKNHHQE-EIEQKFHKK--------KTTPSMRELFSSSSLDKQVLYHDE--GG 88
Query: 113 KEAKRLQTSVVXXXXXXXXXXXXX----------XXXWDFSEGSNHGRDKTDAYYQNMIE 162
K+ +LQT V+ +N+GRD+TDAYYQNMIE
Sbjct: 89 KKVGKLQTLVMGGGGMGCDGGSICGGCNGSGRDSGGGNGNGWENNYGRDETDAYYQNMIE 148
Query: 163 ANPDDALLLGNYAKFLKEVRRDYTKAEEYLERAILASPGDGHTLSLYADLIWQTEKNADR 222
ANP+++LLLGNYAKFLKEVR DY KAEEY+ERAILASP D LSLYADLIWQTEKNADR
Sbjct: 149 ANPNNSLLLGNYAKFLKEVRGDYGKAEEYVERAILASPSDADALSLYADLIWQTEKNADR 208
Query: 223 AEQYFNQAVQSAPED 237
AE YF++A+QS P D
Sbjct: 209 AEAYFDRAIQSDPND 223
>Medtr7g098450.1 | TPR repeat protein | HC | chr7:39412668-39410728
| 20130731
Length = 376
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 80/117 (68%), Gaps = 3/117 (2%)
Query: 146 SNHGRDKTDAYYQNMIEANPDDALLLGNYAKFLKEVRRDYTKAEEYLERAILASPGDGHT 205
SNHG + YY+ M++ NP + L L NYA+FL + ++D AEEY RAILA P DG
Sbjct: 245 SNHG---VEEYYKKMVQQNPGNPLFLRNYAQFLYQCKQDREGAEEYYSRAILADPNDGEV 301
Query: 206 LSLYADLIWQTEKNADRAEQYFNQAVQSAPEDSYVLASYANFLWDAEDEEDKDSQNE 262
LS Y L+W+ ++ +RA YF +AVQ++P+DS+V A+YA+FLWD E++ED N+
Sbjct: 302 LSQYGKLVWELHRDEERASSYFERAVQASPDDSHVQAAYASFLWDTEEDEDAAGSND 358
>Medtr7g098450.2 | TPR repeat protein | HC | chr7:39412635-39410361
| 20130731
Length = 353
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 80/117 (68%), Gaps = 3/117 (2%)
Query: 146 SNHGRDKTDAYYQNMIEANPDDALLLGNYAKFLKEVRRDYTKAEEYLERAILASPGDGHT 205
SNHG + YY+ M++ NP + L L NYA+FL + ++D AEEY RAILA P DG
Sbjct: 222 SNHG---VEEYYKKMVQQNPGNPLFLRNYAQFLYQCKQDREGAEEYYSRAILADPNDGEV 278
Query: 206 LSLYADLIWQTEKNADRAEQYFNQAVQSAPEDSYVLASYANFLWDAEDEEDKDSQNE 262
LS Y L+W+ ++ +RA YF +AVQ++P+DS+V A+YA+FLWD E++ED N+
Sbjct: 279 LSQYGKLVWELHRDEERASSYFERAVQASPDDSHVQAAYASFLWDTEEDEDAAGSND 335
>Medtr7g099260.1 | TPR repeat protein | HC | chr7:39789340-39791288
| 20130731
Length = 363
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 77/114 (67%), Gaps = 3/114 (2%)
Query: 143 SEGSNHGRDKTDAYYQNMIEANPDDALLLGNYAKFLKEVRRDYTKAEEYLERAILASPGD 202
+ +NHG + YY+ M++ NP + L L NYA+FL + ++D AEEY RAILA P D
Sbjct: 230 GDNNNHG---VEQYYKKMVQQNPGNPLFLRNYAQFLYQCKQDLEGAEEYYSRAILADPND 286
Query: 203 GHTLSLYADLIWQTEKNADRAEQYFNQAVQSAPEDSYVLASYANFLWDAEDEED 256
G LS Y L+W+ + +RA YF +AVQ++PEDS+V A+YA+FLWD E+E D
Sbjct: 287 GEVLSQYGKLVWELHHDEERASSYFERAVQASPEDSHVQAAYASFLWDTEEEND 340
>Medtr7g099260.2 | TPR repeat protein | HC | chr7:39789442-39791288
| 20130731
Length = 363
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 77/114 (67%), Gaps = 3/114 (2%)
Query: 143 SEGSNHGRDKTDAYYQNMIEANPDDALLLGNYAKFLKEVRRDYTKAEEYLERAILASPGD 202
+ +NHG + YY+ M++ NP + L L NYA+FL + ++D AEEY RAILA P D
Sbjct: 230 GDNNNHG---VEQYYKKMVQQNPGNPLFLRNYAQFLYQCKQDLEGAEEYYSRAILADPND 286
Query: 203 GHTLSLYADLIWQTEKNADRAEQYFNQAVQSAPEDSYVLASYANFLWDAEDEED 256
G LS Y L+W+ + +RA YF +AVQ++PEDS+V A+YA+FLWD E+E D
Sbjct: 287 GEVLSQYGKLVWELHHDEERASSYFERAVQASPEDSHVQAAYASFLWDTEEEND 340
>Medtr5g029910.1 | TPR repeat protein | HC | chr5:12584803-12582810
| 20130731
Length = 253
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 53/102 (51%), Positives = 74/102 (72%)
Query: 150 RDKTDAYYQNMIEANPDDALLLGNYAKFLKEVRRDYTKAEEYLERAILASPGDGHTLSLY 209
R + AYY+ M+++NP DALLL NY K+L EV ++ +AEEY RAILA+P D LSLY
Sbjct: 119 RMEIGAYYEEMLKSNPADALLLRNYGKYLHEVEKNMVRAEEYYGRAILANPEDAELLSLY 178
Query: 210 ADLIWQTEKNADRAEQYFNQAVQSAPEDSYVLASYANFLWDA 251
LIW+ ++ +RA+ YF+QA+ P+DS VL SYA+F+W+A
Sbjct: 179 GKLIWEMSRDEERAKSYFDQAIHVDPDDSTVLGSYAHFMWEA 220
>Medtr1g073230.1 | O-linked N-acetylglucosamine transferase, ogt
protein, putative | HC | chr1:32490728-32494156 |
20130731
Length = 376
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 69/111 (62%), Gaps = 1/111 (0%)
Query: 146 SNHGRDKTDA-YYQNMIEANPDDALLLGNYAKFLKEVRRDYTKAEEYLERAILASPGDGH 204
+N+ D DA Y + MI NP++ L L YA+FL + RD AE+Y RAI A P DG
Sbjct: 265 ANYSEDSNDADYLKKMINENPNNPLFLKKYAQFLFQSNRDLEAAEDYYSRAISADPSDGE 324
Query: 205 TLSLYADLIWQTEKNADRAEQYFNQAVQSAPEDSYVLASYANFLWDAEDEE 255
T+S YA L WQ + ++A F QAV++ P DS VLA+Y FLW+ EDEE
Sbjct: 325 TISEYAKLQWQLHHDQEKALSLFEQAVKATPGDSNVLAAYTCFLWETEDEE 375
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 66/102 (64%), Gaps = 1/102 (0%)
Query: 156 YYQNMIEANPDDALLLGNYAKFLKEVRRDYTKAEEYLERAILASPGDGHTLSLYADLIWQ 215
YY+ M+ P L+L YA FL+ + + AEEY RA LA P DG L YA L+W+
Sbjct: 132 YYKIMVHDYPSHPLILKKYAHFLQ-GKGELQDAEEYFHRATLADPNDGEILMHYAKLVWE 190
Query: 216 TEKNADRAEQYFNQAVQSAPEDSYVLASYANFLWDAEDEEDK 257
+ DRA YF +A +++P+DS VLA+YA+FLW+ ED+E++
Sbjct: 191 NHHDRDRASVYFERAAKASPQDSDVLAAYASFLWETEDDENE 232
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 142 FSEGSNHGRDKTDAYYQNMIEANPDDALLLGNYAKFLKEVRRDYTKAEEYLERAILASPG 201
F +G +D + Y+ A+P+D +L +YAK + E D +A Y ERA ASP
Sbjct: 153 FLQGKGELQD-AEEYFHRATLADPNDGEILMHYAKLVWENHHDRDRASVYFERAAKASPQ 211
Query: 202 DGHTLSLYADLIWQTEKNADRAEQYFNQ 229
D L+ YA +W+TE + + +E + Q
Sbjct: 212 DSDVLAAYASFLWETEDDENESENHTTQ 239
>Medtr3g463450.1 | TPR superfamily protein | HC |
chr3:25403273-25399680 | 20130731
Length = 513
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 64/104 (61%)
Query: 152 KTDAYYQNMIEANPDDALLLGNYAKFLKEVRRDYTKAEEYLERAILASPGDGHTLSLYAD 211
+T+ YQ + P++ALLL NYA+FL V ++ +AEEY +RAI P D + YA
Sbjct: 398 RTELVYQTGLSQEPNNALLLANYAQFLYIVAHEFDRAEEYFKRAIEVEPPDAEAYNKYAT 457
Query: 212 LIWQTEKNADRAEQYFNQAVQSAPEDSYVLASYANFLWDAEDEE 255
+W+ + + AE+ + +A+ + P ++Y A+YA+FLW+ E+
Sbjct: 458 FLWKVKNDLWAAEETYLEAISAEPSNTYYAANYAHFLWNTGGED 501
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 35/69 (50%)
Query: 148 HGRDKTDAYYQNMIEANPDDALLLGNYAKFLKEVRRDYTKAEEYLERAILASPGDGHTLS 207
H D+ + Y++ IE P DA YA FL +V+ D AEE AI A P + + +
Sbjct: 429 HEFDRAEEYFKRAIEVEPPDAEAYNKYATFLWKVKNDLWAAEETYLEAISAEPSNTYYAA 488
Query: 208 LYADLIWQT 216
YA +W T
Sbjct: 489 NYAHFLWNT 497
>Medtr5g082130.1 | hypothetical protein | HC |
chr5:35259864-35257495 | 20130731
Length = 416
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 63/106 (59%)
Query: 151 DKTDAYYQNMIEANPDDALLLGNYAKFLKEVRRDYTKAEEYLERAILASPGDGHTLSLYA 210
+KTDAYY+ I P ++LLL NYA+FL V +D AEEY +++++ + Y
Sbjct: 296 EKTDAYYKKHINLAPYNSLLLSNYAQFLFLVMKDNDGAEEYYKQSVVVESPEAEAYCRYG 355
Query: 211 DLIWQTEKNADRAEQYFNQAVQSAPEDSYVLASYANFLWDAEDEED 256
D + K+ AE + QA+++ P ++Y L+ YA+FLW+ +++
Sbjct: 356 DFLLWIRKDNWAAELRYLQALEADPGNTYYLSKYASFLWNTGGQQE 401