Miyakogusa Predicted Gene

Lj3g3v2187050.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2187050.1 tr|B9MWP3|B9MWP3_POPTR Histidine phosphotransfer
protein OS=Populus trichocarpa GN=POPTRDRAFT_592711,86.52,0,seg,NULL;
Histidine-containing phosphotransfer domain, HPT domain,Signal
transduction histidine kina,CUFF.43642.1
         (146 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g103870.1 | histidine phosphotransfer protein | HC | chr2:...   244   2e-65
Medtr4g010160.1 | histidine phosphotransfer protein | HC | chr4:...   241   2e-64
Medtr2g020770.1 | histidine phosphotransfer protein | HC | chr2:...   103   7e-23
Medtr1g082290.1 | histidine phosphotransfer protein | HC | chr1:...   101   3e-22
Medtr7g114020.1 | histidine phosphotransfer protein | HC | chr7:...   101   3e-22
Medtr7g114020.2 | histidine phosphotransfer protein | HC | chr7:...   101   3e-22
Medtr1g089130.1 | histidine phosphotransfer protein | HC | chr1:...    95   3e-20
Medtr2g020770.2 | histidine phosphotransfer protein | HC | chr2:...    94   4e-20
Medtr2g100900.1 | histidine phosphotransfer protein | HC | chr2:...    78   3e-15
Medtr2g100880.1 | histidine phosphotransfer protein | HC | chr2:...    77   4e-15

>Medtr2g103870.1 | histidine phosphotransfer protein | HC |
           chr2:44734362-44732919 | 20130731
          Length = 158

 Score =  244 bits (623), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 118/146 (80%), Positives = 128/146 (87%)

Query: 1   MNRLLAFLFHQGVXXXXXXXXXXXXXXSSPNFVSEVVNIYFHESEKLLRNLRALLMEREF 60
           MNRLLAFLFHQGV              +SPNFVSEVVNIYFHESEKLL NLR+LLMEREF
Sbjct: 13  MNRLLAFLFHQGVLDEQFLQLQQLQDHTSPNFVSEVVNIYFHESEKLLTNLRSLLMEREF 72

Query: 61  SDYKKMGIHLNQFMGSSSSIGAKRVTNVCVAFRAASEQNNRTGCLRALEMLEHEYCYLKN 120
           SDYKK+ IHLNQF+GSSSSIGAKRVT++C+AFRAASEQ+NR GCLRALEMLEHEYCYLKN
Sbjct: 73  SDYKKIEIHLNQFIGSSSSIGAKRVTSICIAFRAASEQDNRAGCLRALEMLEHEYCYLKN 132

Query: 121 KLHELFQIEQQRALAAGVRYPVVQNQ 146
           KLHELFQIEQQRALAAGVRYP+ Q+Q
Sbjct: 133 KLHELFQIEQQRALAAGVRYPMQQHQ 158


>Medtr4g010160.1 | histidine phosphotransfer protein | HC |
           chr4:2259711-2261093 | 20130731
          Length = 145

 Score =  241 bits (615), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 120/146 (82%), Positives = 125/146 (85%), Gaps = 1/146 (0%)

Query: 1   MNRLLAFLFHQGVXXXXXXXXXXXXXXSSPNFVSEVVNIYFHESEKLLRNLRALLMEREF 60
           MNRLL+FLFHQGV              +SPNFV EVVNIYFHESEKLLRNLRALLMEREF
Sbjct: 1   MNRLLSFLFHQGVLDEQFLQLQQLQDETSPNFVYEVVNIYFHESEKLLRNLRALLMEREF 60

Query: 61  SDYKKMGIHLNQFMGSSSSIGAKRVTNVCVAFRAASEQNNRTGCLRALEMLEHEYCYLKN 120
            DYKK+GI LNQFMGSSSSIGAKRVTNVCVAFR A+EQNNR GC RALEMLEHEYCYLKN
Sbjct: 61  MDYKKLGIDLNQFMGSSSSIGAKRVTNVCVAFRVATEQNNRAGCFRALEMLEHEYCYLKN 120

Query: 121 KLHELFQIEQQRALAAGVRYPVVQNQ 146
           KLHELFQIEQQRALAAGVRYP VQN+
Sbjct: 121 KLHELFQIEQQRALAAGVRYP-VQNE 145


>Medtr2g020770.1 | histidine phosphotransfer protein | HC |
           chr2:6971467-6968954 | 20130731
          Length = 153

 Score =  103 bits (256), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 51/117 (43%), Positives = 83/117 (70%), Gaps = 2/117 (1%)

Query: 28  SSPNFVSEVVNIYFHESEKLLRNLRALLMEREFSDYKKMGIHLNQFMGSSSSIGAKRVTN 87
           ++P FV EVV+++F +SE++L++L +  ++++  D+KK+  H++QF GSS+SIGA+RV N
Sbjct: 37  NNPEFVFEVVSLFFDDSERILKDL-SFAVDQQSIDFKKVDAHVHQFKGSSASIGAQRVKN 95

Query: 88  VCVAFRAASEQNNRTGCLRALEMLEHEYCYLKNKLHELFQIEQQRALAAGVRYPVVQ 144
            CVAFR   E+ N   C R L+ ++ EY  +KNKL  L ++EQQ  +AAG   P+++
Sbjct: 96  SCVAFRNFCEEQNIDACRRCLQQVKQEYLLVKNKLETLLRLEQQ-IVAAGGSIPMME 151


>Medtr1g082290.1 | histidine phosphotransfer protein | HC |
           chr1:36582989-36581199 | 20130731
          Length = 152

 Score =  101 bits (251), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 46/124 (37%), Positives = 78/124 (62%), Gaps = 1/124 (0%)

Query: 8   LFHQGVXXXXXXXXXXXXXXSSPNFVSEVVNIYFHESEKLLRNLRALLMEREFSDYKKMG 67
           LFH+G                +P+FV +V+ ++F ++E+LL+ L   L + +  D+K+M 
Sbjct: 18  LFHEGFLDDQFNQLEQLQDEKNPDFVVQVITLFFDDAERLLKELTTSLSQEKI-DFKRMD 76

Query: 68  IHLNQFMGSSSSIGAKRVTNVCVAFRAASEQNNRTGCLRALEMLEHEYCYLKNKLHELFQ 127
            H++Q  GSSSSIGA+RV   C++FR    + N  GCL++L+ ++HEY  +K+KL  LF+
Sbjct: 77  AHVHQLKGSSSSIGAQRVQKACISFRDFCTEQNVEGCLKSLQQVKHEYSLVKSKLQTLFK 136

Query: 128 IEQQ 131
           +E++
Sbjct: 137 MEEE 140


>Medtr7g114020.1 | histidine phosphotransfer protein | HC |
           chr7:47026918-47029559 | 20130731
          Length = 147

 Score =  101 bits (251), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 53/134 (39%), Positives = 77/134 (57%), Gaps = 1/134 (0%)

Query: 8   LFHQGVXXXXXXXXXXXXXXSSPNFVSEVVNIYFHESEKLLRNLRALLMEREFSDYKKMG 67
           LF QG               S+PNFV EVV ++F ++EKLL  L   + +    D+K++ 
Sbjct: 14  LFQQGFLDDQFNQLQLLQDESNPNFVVEVVTLFFEDAEKLLNQLEKEIGQENNIDFKRVD 73

Query: 68  IHLNQFMGSSSSIGAKRVTNVCVAFRAASEQNNRTGCLRALEMLEHEYCYLKNKLHELFQ 127
             ++Q  GSSSSIGA+RV  VC+AF+   E+ N  GC ++L+ ++ EY  +K K   LF+
Sbjct: 74  ALVHQLKGSSSSIGAQRVQRVCIAFKNYCEEKNIEGCFKSLQDIKQEYTLVKTKFETLFK 133

Query: 128 IEQQRALAAGVRYP 141
           +EQQ   AAG   P
Sbjct: 134 MEQQ-IFAAGGSAP 146


>Medtr7g114020.2 | histidine phosphotransfer protein | HC |
           chr7:47026918-47029678 | 20130731
          Length = 147

 Score =  101 bits (251), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 53/134 (39%), Positives = 77/134 (57%), Gaps = 1/134 (0%)

Query: 8   LFHQGVXXXXXXXXXXXXXXSSPNFVSEVVNIYFHESEKLLRNLRALLMEREFSDYKKMG 67
           LF QG               S+PNFV EVV ++F ++EKLL  L   + +    D+K++ 
Sbjct: 14  LFQQGFLDDQFNQLQLLQDESNPNFVVEVVTLFFEDAEKLLNQLEKEIGQENNIDFKRVD 73

Query: 68  IHLNQFMGSSSSIGAKRVTNVCVAFRAASEQNNRTGCLRALEMLEHEYCYLKNKLHELFQ 127
             ++Q  GSSSSIGA+RV  VC+AF+   E+ N  GC ++L+ ++ EY  +K K   LF+
Sbjct: 74  ALVHQLKGSSSSIGAQRVQRVCIAFKNYCEEKNIEGCFKSLQDIKQEYTLVKTKFETLFK 133

Query: 128 IEQQRALAAGVRYP 141
           +EQQ   AAG   P
Sbjct: 134 MEQQ-IFAAGGSAP 146


>Medtr1g089130.1 | histidine phosphotransfer protein | HC |
           chr1:40099179-40095805 | 20130731
          Length = 149

 Score = 94.7 bits (234), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 54/132 (40%), Positives = 77/132 (58%), Gaps = 3/132 (2%)

Query: 6   AFLFHQGVXXXXXXXXXXXXXXSSPNFVSEVVNIYFHESEKLLRNL-RALLMEREFSDYK 64
           A +F QG               +SP+FV EV+ ++F +SEKLL N+ RAL  E+   ++K
Sbjct: 13  AAMFQQGYLDDQFSQLQKLQDDTSPDFVIEVMTMFFDDSEKLLNNMSRAL--EQVPVNFK 70

Query: 65  KMGIHLNQFMGSSSSIGAKRVTNVCVAFRAASEQNNRTGCLRALEMLEHEYCYLKNKLHE 124
           ++  H +Q  GSS+S+GA RV NVC  FR   E  N  GC+R L+ L+ EY  LKN L  
Sbjct: 71  QIDAHAHQQKGSSASVGAARVKNVCGTFRNFCEAQNLEGCVRCLQQLQQEYSLLKNNLKY 130

Query: 125 LFQIEQQRALAA 136
           LF+++Q+   A 
Sbjct: 131 LFKLQQEIKTAG 142


>Medtr2g020770.2 | histidine phosphotransfer protein | HC |
           chr2:6971467-6968958 | 20130731
          Length = 144

 Score = 94.0 bits (232), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 44/103 (42%), Positives = 73/103 (70%), Gaps = 1/103 (0%)

Query: 28  SSPNFVSEVVNIYFHESEKLLRNLRALLMEREFSDYKKMGIHLNQFMGSSSSIGAKRVTN 87
           ++P FV EVV+++F +SE++L++L +  ++++  D+KK+  H++QF GSS+SIGA+RV N
Sbjct: 37  NNPEFVFEVVSLFFDDSERILKDL-SFAVDQQSIDFKKVDAHVHQFKGSSASIGAQRVKN 95

Query: 88  VCVAFRAASEQNNRTGCLRALEMLEHEYCYLKNKLHELFQIEQ 130
            CVAFR   E+ N   C R L+ ++ EY  +KNKL  L ++ +
Sbjct: 96  SCVAFRNFCEEQNIDACRRCLQQVKQEYLLVKNKLETLLRVSK 138


>Medtr2g100900.1 | histidine phosphotransfer protein | HC |
           chr2:43407985-43406861 | 20130731
          Length = 150

 Score = 77.8 bits (190), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 65/124 (52%), Gaps = 1/124 (0%)

Query: 8   LFHQGVXXXXXXXXXXXXXXSSPNFVSEVVNIYFHESEKLLRNLRALLMEREFSDYKKMG 67
           LF QG               ++PNFV E+V +Y+ +S +L+ +L   L ER   D+ K+ 
Sbjct: 17  LFDQGHLDEQFIQLEELQDDANPNFVEEIVTLYYRDSSRLISSLEQTL-ERSPLDFNKLD 75

Query: 68  IHLNQFMGSSSSIGAKRVTNVCVAFRAASEQNNRTGCLRALEMLEHEYCYLKNKLHELFQ 127
             ++QF GSSSSIGAK+V       R      N  GC ++ + ++ EY  L+ +L   FQ
Sbjct: 76  TIMHQFKGSSSSIGAKKVKAESTLIREYCRTGNAEGCRKSFQQMKREYAALRKRLETYFQ 135

Query: 128 IEQQ 131
           + +Q
Sbjct: 136 LARQ 139


>Medtr2g100880.1 | histidine phosphotransfer protein | HC |
           chr2:43395841-43394459 | 20130731
          Length = 150

 Score = 77.4 bits (189), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 65/124 (52%), Gaps = 1/124 (0%)

Query: 8   LFHQGVXXXXXXXXXXXXXXSSPNFVSEVVNIYFHESEKLLRNLRALLMEREFSDYKKMG 67
           LF QG               ++PNFV E+V +Y+ +S +L+ +L   L ER   D+ K+ 
Sbjct: 17  LFDQGHLDEQFIQLEELQDDANPNFVEEIVTLYYRDSSRLISSLEQTL-ERSPLDFNKLD 75

Query: 68  IHLNQFMGSSSSIGAKRVTNVCVAFRAASEQNNRTGCLRALEMLEHEYCYLKNKLHELFQ 127
             ++QF GSSSSIGAK+V       R      N  GC ++ + ++ EY  L+ +L   FQ
Sbjct: 76  TIMHQFKGSSSSIGAKKVKAESTLIREYCRTGNAEGCRKSFQQMKKEYVALRKRLETYFQ 135

Query: 128 IEQQ 131
           + +Q
Sbjct: 136 LARQ 139