Miyakogusa Predicted Gene

Lj3g3v2187030.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2187030.1 tr|G7JGX9|G7JGX9_MEDTR
Palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase OS=Medicago
truncat,82.43,0,DELTA 9 DESATURASE,NULL; ACYL-COA DESATURASE,NULL;
FACDDSATRASE,Fatty acid desaturase, type 1, core;,CUFF.43641.1
         (386 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g010150.1 | fatty-acid desaturase | HC | chr4:2249018-2251...   654   0.0  

>Medtr4g010150.1 | fatty-acid desaturase | HC | chr4:2249018-2251257
           | 20130731
          Length = 394

 Score =  654 bits (1687), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/387 (80%), Positives = 344/387 (88%), Gaps = 3/387 (0%)

Query: 1   MALITSQPKNPILKTYFTTIHRAIPQRNRTVVGLGXXXXXXXXXXXXXXYDSKPIQISLK 60
           MALITSQPKNPIL  +FTT+H +IPQ +R+++ LG              ++SK     LK
Sbjct: 1   MALITSQPKNPILHNHFTTLHCSIPQFSRSILNLGPFSNNAKAIKLCN-FNSKSRNFPLK 59

Query: 61  NNPFTYNLPLIAKANAALGEA-LEPEQGNS-KHRKILLSDVEVKRERRLFFGRKWNSLDI 118
           NNPF +N  +IAK+NAA+GEA +EPE+    KHRKI LSDVEVKRE+ +FFGRKWNSLDI
Sbjct: 60  NNPFNFNPKIIAKSNAAIGEATVEPEEEVPLKHRKIFLSDVEVKREKEVFFGRKWNSLDI 119

Query: 119 GTAAIVFAMHVLCLFAPFQFNWQAFWVAMALYVVTGLFGITLSFHRNLSHKSFKLPKWLE 178
           GT  IV +MH+LCLFAPF FNW AFWV++ALYVVTGLFGIT SFHRNLSH+SFKLPKWLE
Sbjct: 120 GTFVIVLSMHLLCLFAPFNFNWPAFWVSVALYVVTGLFGITTSFHRNLSHRSFKLPKWLE 179

Query: 179 YTFAYCGVLALQGNPIDWVSTHRYHHQFCDSEKDPHSPIEGFWFSHMSWLFDTNSIAERC 238
           Y FAYCGVLALQGNPIDWVSTHRYHHQFCDSEKDPHSPIEGFWFSHMSWLFDTNSIAERC
Sbjct: 180 YFFAYCGVLALQGNPIDWVSTHRYHHQFCDSEKDPHSPIEGFWFSHMSWLFDTNSIAERC 239

Query: 239 GEPNNVGDLEKQSFYRFIRSTYIVHPFALGALLYAIGGFPFLVWGMGVRIVWVYHITWLV 298
           GEP NVGDLEKQSFYRF+RSTY+VHPFALGALLYAIGGFPFLVWGMGVR+VWVYHITWLV
Sbjct: 240 GEPTNVGDLEKQSFYRFLRSTYMVHPFALGALLYAIGGFPFLVWGMGVRVVWVYHITWLV 299

Query: 299 NSACHVWGDQPWNTRDLSRNNWWVAVLAFGEGWHNNHHAFEYSARHGLEWWQLDLTWYMV 358
           NSACHVWG QPWNTRDLSRNNWWVA+LAFGEGWHNNHHAFEYSARHGLEWW+LD+TWY+V
Sbjct: 300 NSACHVWGKQPWNTRDLSRNNWWVALLAFGEGWHNNHHAFEYSARHGLEWWELDMTWYLV 359

Query: 359 RFLQAIGLATDVKVPTESQRQRMALNN 385
           +FLQAIGLATDVKVP+ESQ+QRMALNN
Sbjct: 360 KFLQAIGLATDVKVPSESQKQRMALNN 386