Miyakogusa Predicted Gene

Lj3g3v2184850.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2184850.2 Non Characterized Hit- tr|I1KGZ0|I1KGZ0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.2705
PE=,70.55,0,Tetratricopeptide repeats,Tetratricopeptide repeat;
seg,NULL; no description,Tetratricopeptide-like ,CUFF.43844.2
         (794 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g009960.1 | eukaryotic translation initiation factor 3 sub...  1065   0.0  
Medtr4g009960.2 | eukaryotic translation initiation factor 3 sub...   557   e-158
Medtr4g009960.3 | eukaryotic translation initiation factor 3 sub...   557   e-158
Medtr4g009960.4 | eukaryotic translation initiation factor 3 sub...   518   e-147
Medtr8g027685.1 | eukaryotic translation initiation factor 3 sub...   509   e-144
Medtr3g027610.1 | eukaryotic translation initiation factor 3 sub...   224   2e-58
Medtr6g052190.1 | hypothetical protein | LC | chr6:18201200-1820...    97   7e-20

>Medtr4g009960.1 | eukaryotic translation initiation factor 3 subunit
            | HC | chr4:2156354-2144712 | 20130731
          Length = 1638

 Score = 1065 bits (2753), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 561/812 (69%), Positives = 626/812 (77%), Gaps = 55/812 (6%)

Query: 3    CSSVDGRNLLESSKIALDKGKLEDAVNYGTKALAKMMAVCGPYHRNTASAYSLLAVVLYH 62
            CSS+DGRNLLESSKIALDKGKLEDAV+YGTKALAKMM VCGPYHRNTASAYSLLAVVLYH
Sbjct: 862  CSSIDGRNLLESSKIALDKGKLEDAVSYGTKALAKMMTVCGPYHRNTASAYSLLAVVLYH 921

Query: 63   TGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLSVFYYRLQHIELALKYVNRALFLL 122
            TGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLSVFYYRLQHIELALKYVNRALFLL
Sbjct: 922  TGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLSVFYYRLQHIELALKYVNRALFLL 981

Query: 123  HFTCGLSHPNTAATYINVAMMEEGIGNVNVALRYLHEALKCNKRLLGADHIQTAASYHAI 182
            HFTCGLSHPNTAATYINVAMMEEG+GNV+VALRYLHEALKCNKRLLGADHIQTAASYHAI
Sbjct: 982  HFTCGLSHPNTAATYINVAMMEEGMGNVHVALRYLHEALKCNKRLLGADHIQTAASYHAI 1041

Query: 183  AIALSLMEAYSLSVQHEQTTLKILQSKLGSEDLRTQDAAAWLEYFESKALEQQEAAKNGT 242
            AIALSLMEAYSLSVQHEQTTLKILQ+KLG+EDLRTQDAAAWLEYFESKA+EQQEAAKNGT
Sbjct: 1042 AIALSLMEAYSLSVQHEQTTLKILQAKLGAEDLRTQDAAAWLEYFESKAIEQQEAAKNGT 1101

Query: 243  PKADTSIASKGHLSVSDLLDFISPDRVSKANDSQKK-RRAKIVPVSDNNCEEHVDT-VAD 300
            PK DTSIASKGHLSVSDLLDFISPD  SK ND+Q+K RR KI+P+SDNN +EH DT + D
Sbjct: 1102 PKTDTSIASKGHLSVSDLLDFISPDNDSKGNDAQRKQRRPKILPISDNNSQEHDDTPIVD 1161

Query: 301  EDILFDNSNDAKTTGEGNIEEKNGTRDSEELKENGDLTRYTP-VTSEVVYETSSDEGWKE 359
            + ++ DN+ DA    EG IEE      +EE K+  DL+ + P VT E VYETSSDEGW+E
Sbjct: 1162 DIVIVDNAKDAAKAVEGKIEEPKAKHGTEEPKKIVDLSMHKPVVTVEAVYETSSDEGWQE 1221

Query: 360  ASSKGRSANAANRKFARRQRPHLSKLSINGSDRGI----SYRNDIASPLEKGAPKVIAGM 415
            A+SKGRS NAANRK  RRQRP LSKL++ GSD  +    SYRND  +  +K APKV + M
Sbjct: 1222 ANSKGRSGNAANRKSGRRQRPVLSKLTVKGSDNHMYKEASYRND-TTLHQKAAPKVASAM 1280

Query: 416  SSPSRQSKARNLSLKEDSVNKQTKALLSKNXXXXXXXXXXXXXXXXYKEVAVAPPGTVLK 475
             SPSR+SK               KAL SK                 YKEVA APPGTVLK
Sbjct: 1281 LSPSRKSKT-------------PKALSSKISSTPASLSSLASKSISYKEVAAAPPGTVLK 1327

Query: 476  PLLEKGEIERVSAENEICSSSSVMPLNEGSSQSSIINPVSQEDKSEGT------CEIESQ 529
            PLLEK E E+V+ ENE       MP NEGS ++S  + V Q+D+ E +       + ES+
Sbjct: 1328 PLLEKTETEKVNDENE-------MPKNEGSVETSNADTVPQKDEKEPSDADTDPQQDESE 1380

Query: 530  QENSEPELETVSLASDKAKLAEANCSKLSAAAKPFNPGTLSLSHQLNSASFTTIYDANVS 589
            Q+NS  ELE VS +SD+AK +E N SKLSAAAKPF+PGTLS S  LN     +IYDANVS
Sbjct: 1381 QDNSSSELEKVSPSSDQAKSSETNGSKLSAAAKPFSPGTLSASRHLNPVPPASIYDANVS 1440

Query: 590  QAVLVEPVLPPAAARVPCGPRSPLYYRTNYAFRM------VRERSGFGAPRIMNPHAPEF 643
              +LVEPVLPPAAARVPCGPRSPLYYRTNY FRM      +RE SG G P+IMNPHAPEF
Sbjct: 1441 PGILVEPVLPPAAARVPCGPRSPLYYRTNYTFRMKHSSTKIREISGSGGPKIMNPHAPEF 1500

Query: 644  VPRGASQTETGDSEKNKLDDXXXXXXXXXXXXXXXARQILLSFLVKSVHQNIDSTDESKV 703
            VPR ASQ ET  SEKN                   ARQILLSFLVKSVHQN D+ DE KV
Sbjct: 1501 VPRSASQIET--SEKN----STSKNSLSESEKSEIARQILLSFLVKSVHQNADAVDEPKV 1554

Query: 704  GDRKIENLGNSSDDIAKENAVIKIKYGNEKKNKTVTHSR-ESEEQEKLDVTGKKDGDSEG 762
             + K+E+  NSSD++AK++AVIKI YG E+KNKTV +S  +SEEQ+ L        D EG
Sbjct: 1555 SEGKVESFENSSDEVAKDSAVIKIMYGTEEKNKTVVNSSDDSEEQDNL--------DGEG 1606

Query: 763  FVVVTNKKKNRQKITNGVSELYNQQSICASVR 794
            FVVVTN++K+RQK TNGV+ELYNQ SICASVR
Sbjct: 1607 FVVVTNRRKSRQKTTNGVAELYNQPSICASVR 1638


>Medtr4g009960.2 | eukaryotic translation initiation factor 3 subunit
            | HC | chr4:2156235-2144712 | 20130731
          Length = 1158

 Score =  557 bits (1435), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 263/278 (94%), Positives = 273/278 (98%)

Query: 3    CSSVDGRNLLESSKIALDKGKLEDAVNYGTKALAKMMAVCGPYHRNTASAYSLLAVVLYH 62
            CSS+DGRNLLESSKIALDKGKLEDAV+YGTKALAKMM VCGPYHRNTASAYSLLAVVLYH
Sbjct: 862  CSSIDGRNLLESSKIALDKGKLEDAVSYGTKALAKMMTVCGPYHRNTASAYSLLAVVLYH 921

Query: 63   TGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLSVFYYRLQHIELALKYVNRALFLL 122
            TGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLSVFYYRLQHIELALKYVNRALFLL
Sbjct: 922  TGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLSVFYYRLQHIELALKYVNRALFLL 981

Query: 123  HFTCGLSHPNTAATYINVAMMEEGIGNVNVALRYLHEALKCNKRLLGADHIQTAASYHAI 182
            HFTCGLSHPNTAATYINVAMMEEG+GNV+VALRYLHEALKCNKRLLGADHIQTAASYHAI
Sbjct: 982  HFTCGLSHPNTAATYINVAMMEEGMGNVHVALRYLHEALKCNKRLLGADHIQTAASYHAI 1041

Query: 183  AIALSLMEAYSLSVQHEQTTLKILQSKLGSEDLRTQDAAAWLEYFESKALEQQEAAKNGT 242
            AIALSLMEAYSLSVQHEQTTLKILQ+KLG+EDLRTQDAAAWLEYFESKA+EQQEAAKNGT
Sbjct: 1042 AIALSLMEAYSLSVQHEQTTLKILQAKLGAEDLRTQDAAAWLEYFESKAIEQQEAAKNGT 1101

Query: 243  PKADTSIASKGHLSVSDLLDFISPDRVSKANDSQKKRR 280
            PK DTSIASKGHLSVSDLLDFISPD  SK ND+Q+K+R
Sbjct: 1102 PKTDTSIASKGHLSVSDLLDFISPDNDSKGNDAQRKQR 1139


>Medtr4g009960.3 | eukaryotic translation initiation factor 3 subunit
            | HC | chr4:2156546-2144712 | 20130731
          Length = 1158

 Score =  557 bits (1435), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 263/278 (94%), Positives = 273/278 (98%)

Query: 3    CSSVDGRNLLESSKIALDKGKLEDAVNYGTKALAKMMAVCGPYHRNTASAYSLLAVVLYH 62
            CSS+DGRNLLESSKIALDKGKLEDAV+YGTKALAKMM VCGPYHRNTASAYSLLAVVLYH
Sbjct: 862  CSSIDGRNLLESSKIALDKGKLEDAVSYGTKALAKMMTVCGPYHRNTASAYSLLAVVLYH 921

Query: 63   TGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLSVFYYRLQHIELALKYVNRALFLL 122
            TGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLSVFYYRLQHIELALKYVNRALFLL
Sbjct: 922  TGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLSVFYYRLQHIELALKYVNRALFLL 981

Query: 123  HFTCGLSHPNTAATYINVAMMEEGIGNVNVALRYLHEALKCNKRLLGADHIQTAASYHAI 182
            HFTCGLSHPNTAATYINVAMMEEG+GNV+VALRYLHEALKCNKRLLGADHIQTAASYHAI
Sbjct: 982  HFTCGLSHPNTAATYINVAMMEEGMGNVHVALRYLHEALKCNKRLLGADHIQTAASYHAI 1041

Query: 183  AIALSLMEAYSLSVQHEQTTLKILQSKLGSEDLRTQDAAAWLEYFESKALEQQEAAKNGT 242
            AIALSLMEAYSLSVQHEQTTLKILQ+KLG+EDLRTQDAAAWLEYFESKA+EQQEAAKNGT
Sbjct: 1042 AIALSLMEAYSLSVQHEQTTLKILQAKLGAEDLRTQDAAAWLEYFESKAIEQQEAAKNGT 1101

Query: 243  PKADTSIASKGHLSVSDLLDFISPDRVSKANDSQKKRR 280
            PK DTSIASKGHLSVSDLLDFISPD  SK ND+Q+K+R
Sbjct: 1102 PKTDTSIASKGHLSVSDLLDFISPDNDSKGNDAQRKQR 1139


>Medtr4g009960.4 | eukaryotic translation initiation factor 3 subunit
            | HC | chr4:2156235-2144712 | 20130731
          Length = 1120

 Score =  518 bits (1334), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 244/253 (96%), Positives = 251/253 (99%)

Query: 3    CSSVDGRNLLESSKIALDKGKLEDAVNYGTKALAKMMAVCGPYHRNTASAYSLLAVVLYH 62
            CSS+DGRNLLESSKIALDKGKLEDAV+YGTKALAKMM VCGPYHRNTASAYSLLAVVLYH
Sbjct: 862  CSSIDGRNLLESSKIALDKGKLEDAVSYGTKALAKMMTVCGPYHRNTASAYSLLAVVLYH 921

Query: 63   TGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLSVFYYRLQHIELALKYVNRALFLL 122
            TGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLSVFYYRLQHIELALKYVNRALFLL
Sbjct: 922  TGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLSVFYYRLQHIELALKYVNRALFLL 981

Query: 123  HFTCGLSHPNTAATYINVAMMEEGIGNVNVALRYLHEALKCNKRLLGADHIQTAASYHAI 182
            HFTCGLSHPNTAATYINVAMMEEG+GNV+VALRYLHEALKCNKRLLGADHIQTAASYHAI
Sbjct: 982  HFTCGLSHPNTAATYINVAMMEEGMGNVHVALRYLHEALKCNKRLLGADHIQTAASYHAI 1041

Query: 183  AIALSLMEAYSLSVQHEQTTLKILQSKLGSEDLRTQDAAAWLEYFESKALEQQEAAKNGT 242
            AIALSLMEAYSLSVQHEQTTLKILQ+KLG+EDLRTQDAAAWLEYFESKA+EQQEAAKNGT
Sbjct: 1042 AIALSLMEAYSLSVQHEQTTLKILQAKLGAEDLRTQDAAAWLEYFESKAIEQQEAAKNGT 1101

Query: 243  PKADTSIASKGHL 255
            PK DTSIASKGHL
Sbjct: 1102 PKTDTSIASKGHL 1114


>Medtr8g027685.1 | eukaryotic translation initiation factor 3 subunit
            | HC | chr8:9981153-9966029 | 20130731
          Length = 1827

 Score =  509 bits (1312), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 261/395 (66%), Positives = 305/395 (77%), Gaps = 26/395 (6%)

Query: 3    CSSVDGRNLLESSKIALDKGKLEDAVNYGTKALAKMMAVCGPYHRNTASAYSLLAVVLYH 62
            CSS DGR LLESSK ALDKGKLEDAV YGTKALAK++AVCGPYHR TA AYSLLAVVLYH
Sbjct: 859  CSSADGRQLLESSKTALDKGKLEDAVTYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYH 918

Query: 63   TGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLSVFYYRLQHIELALKYVNRALFLL 122
            TGDFNQATIYQQKALDINERELGLDHPDTMKSYGDL+VFYYRLQH ELALKYV RAL+LL
Sbjct: 919  TGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVKRALYLL 978

Query: 123  HFTCGLSHPNTAATYINVAMMEEGIGNVNVALRYLHEALKCNKRLLGADHIQTAASYHAI 182
            H TCG SHPNTAATYINVAMMEEG+GNV++ALRYLH+ALKCN++LLGADHIQTAASYHAI
Sbjct: 979  HLTCGPSHPNTAATYINVAMMEEGLGNVHIALRYLHKALKCNQKLLGADHIQTAASYHAI 1038

Query: 183  AIALSLMEAYSLSVQHEQTTLKILQSKLGSEDLRTQDAAAWLEYFESKALEQQEAAKNGT 242
            AIALSLMEAY LSVQHEQTTL+IL++KLG +DLRTQDAAAWLEYFESKA EQQEAA+NGT
Sbjct: 1039 AIALSLMEAYPLSVQHEQTTLQILRAKLGPDDLRTQDAAAWLEYFESKAFEQQEAARNGT 1098

Query: 243  PKADTSIASKGHLSVSDLLDFISPDRVSKANDSQKKRRAKIVPVSDNNCEEHVDTVADE- 301
             K D SIASKGHLSVSDLLD+I+P+  +K  D+  KRR ++  +S  N   +V   +DE 
Sbjct: 1099 RKPDASIASKGHLSVSDLLDYINPNHDAKGRDAAAKRRNQVRAISYQN---NVSVSSDES 1155

Query: 302  --DILFDNSNDAKTTGEGNIEEKNGTRDSEELKENGDLTRYTPVTSEVVYE--------- 350
              +I  + S++     E +I E   + DSE  + N       P+  +++ E         
Sbjct: 1156 SKEIQKEASDE-----ELHIPEPASSADSEN-ESNSAPDPEQPILEKILDEKPQPSNELL 1209

Query: 351  ----TSSDEGWKEASSKGRSANAANRKFARRQRPH 381
                   D+GW ++  + RSA +  R+  +R+  H
Sbjct: 1210 SEAHPDGDDGW-QSVQRPRSAGSYGRRLKQRRATH 1243


>Medtr3g027610.1 | eukaryotic translation initiation factor 3 subunit,
            putative | HC | chr3:8657899-8672705 | 20130731
          Length = 1448

 Score =  224 bits (571), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 114/240 (47%), Positives = 159/240 (66%), Gaps = 2/240 (0%)

Query: 2    TCSSVDGRNLLESSKIALDKGKLEDAVNYGTKALAKMMAVCGPYHRNTASAYSLLAVVLY 61
            +CS  + + L+E+ K+ L +G L +A    ++A + +  V GP HR  A+    LA+VLY
Sbjct: 1031 SCS--EAKELVETGKLQLAEGMLSEAYTLFSEAFSILQQVTGPMHREVANCCRYLAMVLY 1088

Query: 62   HTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLSVFYYRLQHIELALKYVNRALFL 121
            H GD   A + Q K L INER LGLDHPDT  SYG++++FY+ L   ELAL++++RAL L
Sbjct: 1089 HAGDMAGAIMQQHKELIINERCLGLDHPDTAHSYGNMALFYHGLNQTELALRHMSRALLL 1148

Query: 122  LHFTCGLSHPNTAATYINVAMMEEGIGNVNVALRYLHEALKCNKRLLGADHIQTAASYHA 181
            L  + G  HP+ AAT+INVAMM + IG +N ALRYL EALK N+RLLG +HIQTA  YHA
Sbjct: 1149 LSLSSGPDHPDVAATFINVAMMYQDIGKMNTALRYLQEALKKNERLLGEEHIQTAVCYHA 1208

Query: 182  IAIALSLMEAYSLSVQHEQTTLKILQSKLGSEDLRTQDAAAWLEYFESKALEQQEAAKNG 241
            +AIA + M A+ LS QHE+ T  IL  +LG +D RT+D+  W+  F+ + ++     + G
Sbjct: 1209 LAIAFNCMGAFKLSHQHEKKTYDILVKQLGEDDSRTRDSQNWMNTFKMREVQMNAQKQKG 1268


>Medtr6g052190.1 | hypothetical protein | LC |
           chr6:18201200-18202902 | 20130731
          Length = 147

 Score = 97.1 bits (240), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 48/76 (63%), Positives = 60/76 (78%)

Query: 200 QTTLKILQSKLGSEDLRTQDAAAWLEYFESKALEQQEAAKNGTPKADTSIASKGHLSVSD 259
           QTTL+IL++KLG +D RTQDAAA LEYFESKA EQQEAA+ GT K D  I+ KG LSV+ 
Sbjct: 67  QTTLQILRAKLGLDDWRTQDAAACLEYFESKAFEQQEAARKGTRKPDAPISRKGPLSVTV 126

Query: 260 LLDFISPDRVSKANDS 275
           LLD+I+P+  +K  D+
Sbjct: 127 LLDYITPNHDAKGRDA 142