Miyakogusa Predicted Gene

Lj3g3v2174820.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2174820.1 Non Characterized Hit- tr|D8SWW0|D8SWW0_SELML
Putative uncharacterized protein OS=Selaginella
moelle,35.11,0.0000000003,coiled-coil,NULL; seg,NULL;
Occludin_ELL,Occludin/RNA polymerase II elongation factor, ELL
domain,CUFF.43621.1
         (427 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g015620.1 | dentin sialophosphoprotein-like protein | HC |...   532   e-151
Medtr8g015610.1 | occludin-like domain protein | LC | chr8:51382...   459   e-129

>Medtr8g015620.1 | dentin sialophosphoprotein-like protein | HC |
            chr8:5148947-5140148 | 20130731
          Length = 1220

 Score =  532 bits (1371), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 288/431 (66%), Positives = 323/431 (74%), Gaps = 13/431 (3%)

Query: 5    KKHSGKDFHVCEVSSMQKDKSRRDAQNENINAVEKKALRNSRDGSNGSKQSLF-MDSNYQ 63
            +KHSGKDF   EVS  Q++KS RD QNE+I A EKK  RNSRDGS GSKQSL  MDSNYQ
Sbjct: 788  RKHSGKDFRAREVSYAQENKSHRDGQNEDIYATEKKVPRNSRDGSIGSKQSLLSMDSNYQ 847

Query: 64   KQGEMVSKSKEGRQGTQSLLGTSPKDN-RLSLDKSPVVNGLGVSRQREASDLELGEFREP 122
            KQGEMV K KEG+Q TQS LGTSPKDN R  L+KSP VNG G+S QRE SDLELGE RE 
Sbjct: 848  KQGEMVGKLKEGQQSTQSHLGTSPKDNNRTGLNKSPAVNGQGISLQRELSDLELGELRES 907

Query: 123  TPEETHVAKPFERKGSFKHFENK-NTSEDRNSDITKVKPLLKATLDSRKQSSVLVSSGFP 181
            TP+ET  AK FERKGSFKH ENK NTSED NS+I KVKP  KATLDS + SSVL SSGFP
Sbjct: 908  TPDETIAAKQFERKGSFKHMENKANTSEDVNSNINKVKPSSKATLDSGRPSSVL-SSGFP 966

Query: 182  DNLEST-----DNHFEDSTKSRSRVMQAHSQHLKSDNAEAGSQNNLTEIN-KFRNNEPGV 235
             NLE T     D HFEDSTKSRSRVMQ HSQHLK+DN + GSQN LTE++ KFRN+E G+
Sbjct: 967  SNLEVTNKKNADYHFEDSTKSRSRVMQTHSQHLKADNVDVGSQNKLTEMSTKFRNSESGM 1026

Query: 236  SQDIDLNGRTESNRRAPANGSKQDTRRGINSYPAKESKRQTPYSLEEVADGGKDSVFAXX 295
            + DIDL+GR+ESNRR PANGSKQ+ +RG+ SYP KESKRQTP S EEV DG KDSVFA  
Sbjct: 1027 NHDIDLDGRSESNRRVPANGSKQEAKRGMVSYPVKESKRQTPNSREEVPDGRKDSVFADR 1086

Query: 296  XXXXXXXXXXXXXXXXXXXXXXXXXXPELKEPIMTFSQYREYVQEFRDKYDSYCSLHKIL 355
                                      PELK PI TFSQY+EYVQ+++DKY+SY SL+KIL
Sbjct: 1087 NNGDQKKRESSSDENSCSYSKFEKEEPELKGPITTFSQYKEYVQDYQDKYESYLSLNKIL 1146

Query: 356  ESYRNEFQKLGDKLEYAKG---MDRYYDIVEQLKESYRRCGPRHKRLKKIFVVLHQELEN 412
            E+YR EFQKLGD LEYAK    MDRY DI  Q+KESYRRCG +HKRLKKIF+VLH+EL N
Sbjct: 1147 ENYRVEFQKLGDDLEYAKSKGDMDRYADIAAQVKESYRRCGAKHKRLKKIFIVLHEELVN 1206

Query: 413  IKQRIKDYAHS 423
             KQ I+D+  S
Sbjct: 1207 TKQMIRDFVQS 1217


>Medtr8g015610.1 | occludin-like domain protein | LC |
            chr8:5138213-5130677 | 20130731
          Length = 1017

 Score =  459 bits (1180), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 259/447 (57%), Positives = 303/447 (67%), Gaps = 29/447 (6%)

Query: 5    KKHSGKDFHVCEVSSMQKDKSRRDAQNENINAVEKKALRNSRDGSNGSKQSLF-MDSNYQ 63
            +KH+GKDF    VS + ++KS +DAQNE+I   EKK  RNSRDGSNGSKQSL  +DSNYQ
Sbjct: 569  RKHTGKDFRAHVVSFVPENKSHKDAQNEDIYVTEKKVPRNSRDGSNGSKQSLLSVDSNYQ 628

Query: 64   KQGEMVSKSKEGRQGTQSLLGTSPKDN-RLSLDKSPVVNGLGVSRQREASDLELGEFREP 122
            K GEMV K KEGRQGTQS LG S KDN R+ L+KS  VNG G+S   E SDL+ GE RE 
Sbjct: 629  KHGEMVGKLKEGRQGTQSHLGKSSKDNNRIGLNKSSAVNGRGISLTGELSDLDYGELRES 688

Query: 123  TPEETHVAKPFERKGSFKHFE-NKNTSEDRNSDITKVKPLLKATLDSRKQSSVLVSSGFP 181
            TPEET VAK FERKGSFKH     NTSE  NS+IT+VKPLLK TLD  + + VL SSGFP
Sbjct: 689  TPEETIVAKQFERKGSFKHIGIEANTSEVMNSNITEVKPLLKPTLDYGRPTLVL-SSGFP 747

Query: 182  DNLEST-----DNHFEDSTKSRSRVMQAHSQHLKSDNAEAGSQNNLTEIN-KFRNNEPGV 235
             NL++T     DNHFEDSTKSR RV Q HS HLK+D+   GSQ  L E++ KFRN+E GV
Sbjct: 748  SNLDNTNEKNVDNHFEDSTKSRCRVTQTHSHHLKADSTNVGSQFFLPEMSTKFRNSESGV 807

Query: 236  SQDIDLNGRTESNRRAPANGSKQDTRRGINSYPAKESKRQTPYSLEEVADGGKDSVFAXX 295
            S+ IDL+G  ++NRR PAN SKQDT+ G+  YP KESK QTP S EEV DG KD+VFA  
Sbjct: 808  SRGIDLDGCRDTNRRVPANRSKQDTKHGMVPYPVKESKIQTPNSCEEVPDGRKDAVFADR 867

Query: 296  XXXXXXXXXXXXXXXXXXXXXXXXXXPELKEPIMTFSQYREYVQEFRDKYDSYCSLHKIL 355
                                      PELK PI TFS+Y EYVQE++DKY+SY SLHKIL
Sbjct: 868  NNGDQKKKELSTDENSCSYSKFEKEEPELKGPITTFSEYTEYVQEYQDKYESYISLHKIL 927

Query: 356  ESYRNEFQKLGDKLEYAKG---MDRYYDIVEQLKESYRRCGPRHKRLKKIFVVLHQE--- 409
            + YR EFQKLGD LE AK    MDRY DI  Q++ESYR+CG R  RLKKIF+VLH+E   
Sbjct: 928  KEYRVEFQKLGDDLESAKSKGDMDRYNDIATQIRESYRQCGSRQNRLKKIFIVLHEEMVL 987

Query: 410  -------------LENIKQRIKDYAHS 423
                         ++N KQRI+D+  S
Sbjct: 988  EFLCAHHAASSHFMQNTKQRIRDFVQS 1014