Miyakogusa Predicted Gene

Lj3g3v2174810.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2174810.1 Non Characterized Hit- tr|I1P8C0|I1P8C0_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4
SV=1,37.5,0.000000000006,seg,NULL,CUFF.43620.1
         (319 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g015620.1 | dentin sialophosphoprotein-like protein | HC |...   268   5e-72
Medtr8g015610.1 | occludin-like domain protein | LC | chr8:51382...   113   2e-25
Medtr1g021875.1 | hypothetical protein | LC | chr1:6649638-66467...    80   3e-15

>Medtr8g015620.1 | dentin sialophosphoprotein-like protein | HC |
           chr8:5148947-5140148 | 20130731
          Length = 1220

 Score =  268 bits (685), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 163/318 (51%), Positives = 194/318 (61%), Gaps = 5/318 (1%)

Query: 1   MIHKQDSNAVSEKEIPAKTKNALRNTPGGKGNIGLKPIDLQGMLISLLKDKPIGMTLKSM 60
           M  KQD+N VSEKEIP +  NA+RN PGGKGN G KP DLQ  LISLLKDKP GM+ K++
Sbjct: 286 MTDKQDTNVVSEKEIPTRESNAMRNKPGGKGNNGSKPSDLQSFLISLLKDKPNGMSHKAL 345

Query: 61  VKVVGDTHPNSTXXXXXXXXXXXXXXXPGRYILRPEVDLANFKKPQTESGRSPEDSHNQI 120
            K V ++ P+S                PGRYIL+P VD  +FKKPQTESG SPE++HNQI
Sbjct: 346 EKSVIESLPSSIKDFVPIIKRIATFQPPGRYILKPAVDSESFKKPQTESGSSPEENHNQI 405

Query: 121 PAREELHDQRSAPQGGGFEERVSNDNVGEVIVQVKSKGEEKLNPLKIIDAQHTSPDIVGE 180
           PA EE H+Q S P  GGFE+++ ND++ E  VQV+SK EE  N L+ ID QH SPDI G+
Sbjct: 406 PAHEEFHNQTSVPL-GGFEDKLPNDDLEET-VQVESKVEEASNTLEKIDTQHVSPDIFGD 463

Query: 181 KKGSDQSEGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           +KGSD SEG                                                   
Sbjct: 464 RKGSDYSEGRAGSSSASGSDSDSESNSSDSGSDSGSHSRSRSRSPAGSGSGSSSDSESDA 523

Query: 241 XXXIKEGLEGSDEDVDILTSDDEKESKHKTEASDQRMSFPVPVKSPDRRSMLIEVDEKRD 300
               KE LEGSDEDVDI+ SDDEKE K+K EA DQR+S  +PVKSPD RSM IE++EK+D
Sbjct: 524 SSSSKEALEGSDEDVDIM-SDDEKEPKNKAEAFDQRIS--IPVKSPDGRSMQIEINEKQD 580

Query: 301 ANESDAVEIEKDSPEELE 318
            NESDAV+IEKDSP E E
Sbjct: 581 GNESDAVDIEKDSPAEQE 598


>Medtr8g015610.1 | occludin-like domain protein | LC |
           chr8:5138213-5130677 | 20130731
          Length = 1017

 Score =  113 bits (283), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/174 (47%), Positives = 100/174 (57%), Gaps = 24/174 (13%)

Query: 1   MIHKQDSNAVSEKEIPAKTKNALRNTPGGKGNIGLKPIDLQGMLISLLKDKPIGMTLKSM 60
           M  KQD+N V EKEIP         T   K N G KPIDLQ MLISLLKD P GMTL+++
Sbjct: 263 MADKQDTNTVFEKEIP---------TRASKENNGSKPIDLQRMLISLLKDNPNGMTLEAL 313

Query: 61  VKVVGDTHPNSTXXXXXXXXXXXXXXXPGRYILRPEVDLANFKKPQTESGRSPEDSHNQI 120
            KVV +  P S                PGRYIL+PEVD  +FKKP TESG     S  +I
Sbjct: 314 EKVVSNVRP-SFIQDLEPTIKRIAKYIPGRYILKPEVDSESFKKP-TESG-----SFLKI 366

Query: 121 PAREELHDQRSAPQGGGFEERVSNDNVGEVIVQVKSKGEEKLNPLKIIDAQHTS 174
            +        SAPQGGGF+E V ND++ E + QVKSK +E+   L+ ID +H S
Sbjct: 367 KS-----CTTSAPQGGGFKEEVPNDDLEETM-QVKSKVKEE--TLEKIDMKHAS 412


>Medtr1g021875.1 | hypothetical protein | LC | chr1:6649638-6646734
           | 20130731
          Length = 322

 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 44/71 (61%), Positives = 53/71 (74%), Gaps = 2/71 (2%)

Query: 248 LEGSDEDVDILTSDDEKESKHKTEASDQRMSFPVPVKSPDRRSMLIEVDEKRDANESDAV 307
           LE +DEDVDIL+  DEKE KH+ E  DQR S P+PVKS D +S    VDEK+D N+SDAV
Sbjct: 159 LESTDEDVDILS--DEKEPKHQAEVCDQRTSLPIPVKSLDGKSTQNAVDEKQDDNKSDAV 216

Query: 308 EIEKDSPEELE 318
           +IEKDS +E E
Sbjct: 217 DIEKDSSKEWE 227