Miyakogusa Predicted Gene

Lj3g3v2172720.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2172720.1 tr|B7FL93|B7FL93_MEDTR Ubiquinone biosynthesis
methyltransferase COQ5 OS=Medicago truncatula
GN=MTR_,86.79,0,SAM_MT_UBIE,2-methoxy-6-polyprenyl-1,4-benzoquinol
methylase domain; MenG_MenH_UbiE: ubiquinone/mena,CUFF.43608.1
         (212 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g009880.1 | 2-methoxy-6-polyprenyl-1,4-benzoquinol methyla...   390   e-109
Medtr5g033700.1 | ubiquinone/menaquinone biosynthesis methyltran...    68   5e-12

>Medtr4g009880.1 | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase
           | HC | chr4:2111461-2106663 | 20130731
          Length = 290

 Score =  390 bits (1002), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 184/212 (86%), Positives = 200/212 (94%)

Query: 1   MLNPFPGMKHLDVAGGTGDVAFRILENINKVKQRGPRDVNEDSLEAETKIYVCDINPNML 60
           MLNPFPGMKHLDVAGGTGDVAFRIL+NIN+VKQRG +D   D+LEA+T+IYVCDINPNML
Sbjct: 79  MLNPFPGMKHLDVAGGTGDVAFRILDNINRVKQRGLQDGFNDALEAKTQIYVCDINPNML 138

Query: 61  NVGKQRSVEMGFGEDSSLEWVEGNAESLSFQNDSMDGYTIAFGIRNVTHIEKVLSEAHRV 120
           NVGKQR+ E G+GED SL WVEGNAESLSFQ+DSMDGYTIAFGIRNVTHIEKVLSEAHRV
Sbjct: 139 NVGKQRAAEKGYGEDGSLVWVEGNAESLSFQDDSMDGYTIAFGIRNVTHIEKVLSEAHRV 198

Query: 121 LKHGGRFLCLELSHVDIPVFKELYDYYSFKVIPLMGELVSGDRQSYQYLVESIRRFPPQE 180
           LKHGGRFLCLELSHV +P+FKELYD YSF VIP +GE+V+GDR+SYQYLVESIRRFPPQE
Sbjct: 199 LKHGGRFLCLELSHVSLPIFKELYDLYSFSVIPRIGEMVAGDRESYQYLVESIRRFPPQE 258

Query: 181 KFASMIADAGFQKVEYENLVGGVVAIHSGLKI 212
           KFASMIADAGFQKVEYENLVGGVVAIHSG+KI
Sbjct: 259 KFASMIADAGFQKVEYENLVGGVVAIHSGIKI 290


>Medtr5g033700.1 | ubiquinone/menaquinone biosynthesis
           methyltransferase | HC | chr5:14532455-14530211 |
           20130731
          Length = 262

 Score = 68.2 bits (165), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 87/199 (43%), Gaps = 21/199 (10%)

Query: 7   GMKHLDVAGGTGDVAFRILENINKVKQRGPRDVNEDSLEAETKIYVCDINPNMLNVGKQR 66
           G + LDV  G+GD++F +    NKV   G             K+   D +   L V   R
Sbjct: 77  GDRVLDVCCGSGDLSFLL---SNKVASNG-------------KVIGLDFSKEQLMVASSR 120

Query: 67  SVEMGFGEDSSLEWVEGNAESLSFQNDSMDGYTIAFGIRNVTHIEKVLSEAHRVLKHGGR 126
           S       +  +EWVEG+A  L F +   D  T+ +G+RNV    K + E  RVLK G  
Sbjct: 121 SFSTNCFNN--IEWVEGDALDLPFSDAWFDAITMGYGLRNVVDKRKAMQEILRVLKPGST 178

Query: 127 FLCLELSHVDIPVFKELYDYY-SFKVIPLMGELVSGDRQSYQYLVESIRRFPPQEKFASM 185
              L+ +  +  +     ++     V+P+    V G    Y+YL  SIR F   ++   +
Sbjct: 179 ASILDFNKSNELLTSSFTEWMIDNIVVPVAS--VYGLSDDYKYLKSSIREFLTGKELEKL 236

Query: 186 IADAGFQKVEYENLVGGVV 204
             + GF    +  + GG++
Sbjct: 237 ALEVGFSTARHYEIGGGLM 255