Miyakogusa Predicted Gene

Lj3g3v2170500.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2170500.1 Non Characterized Hit- tr|B9SE10|B9SE10_RICCO
Putative uncharacterized protein OS=Ricinus communis G,31.12,2e-18,no
description,Mitochondrial glycoprotein; Mitochondrial glycoprotein
MAM33-like,Mitochondrial glyco,CUFF.43594.1
         (236 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g006560.1 | glycoprotein family protein | HC | chr4:678633...   305   4e-83
Medtr1g013120.1 | glycoprotein family protein | HC | chr1:285829...   174   6e-44
Medtr7g063520.1 | glycoprotein family protein | HC | chr7:231645...    92   6e-19
Medtr5g080880.1 | glycoprotein family protein | HC | chr5:346392...    84   2e-16
Medtr5g080870.1 | glycoprotein family protein | LC | chr5:346336...    57   2e-08

>Medtr4g006560.1 | glycoprotein family protein | HC |
           chr4:678633-682789 | 20130731
          Length = 237

 Score =  305 bits (780), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 154/237 (64%), Positives = 174/237 (73%), Gaps = 1/237 (0%)

Query: 1   MARLFRSLRKXXXXXXXXXXXXXXXXXXXXSCISPHLHRRTYISDMRKSAFEGNITRLLR 60
           M RLFRSLRK                    S  S  +  RTYIS M K AFEGNI+RLLR
Sbjct: 1   MTRLFRSLRKTLTLTLTNQIPIQQQSLCISSPSSHIIPSRTYISQMHKEAFEGNISRLLR 60

Query: 61  NEIQYELQSSPSDNP-SNKFGSFAVDGRPGERWITLRRQFANEDIKVEATMFDGAVPAPR 119
           NEIQYELQSS S NP ++KFGSF VDGRPGERWITL+RQFANE+IKVE TMFDGAVPAP+
Sbjct: 61  NEIQYELQSSSSSNPPADKFGSFLVDGRPGERWITLKRQFANENIKVEVTMFDGAVPAPK 120

Query: 120 SSGGVANADEMQLHITLIVSISKGDGGVLEITCSAWPDTIEIKRLLTRAKEKMPAEPYAG 179
            SGGVANADE+QLHITLIV+ISK DG VLEI CSAWPD+I IKRLL RA + M AEPYAG
Sbjct: 121 KSGGVANADEVQLHITLIVNISKEDGDVLEIMCSAWPDSIVIKRLLVRANKNMTAEPYAG 180

Query: 180 PXXXXXXXXXXXXXXXXXEVRGVDDELAIFLHQYMKRKDKSELVGWMERVKSFIERK 236
           P                 EVRG++DELA +LHQYMK KDK+E++GWME+VKS+IE+K
Sbjct: 181 PDFEELDDELQDSLYNFLEVRGINDELAKYLHQYMKHKDKTEIIGWMEKVKSYIEKK 237


>Medtr1g013120.1 | glycoprotein family protein | HC |
           chr1:2858294-2861439 | 20130731
          Length = 233

 Score =  174 bits (442), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 86/190 (45%), Positives = 125/190 (65%), Gaps = 3/190 (1%)

Query: 48  KSAFEGNITRLLRNEIQYELQSSPSDNPSNKFGSFAVDGRPGERWITLRRQFA-NEDIKV 106
           KS FE NI R+LRNEI+Y+ + +P   P  +F SF V+ RPGE+ +TL+ +F  NEDIK+
Sbjct: 45  KSPFESNILRILRNEIEYQAEYAPPHQPVKEFKSFIVEERPGEQVVTLKGKFGDNEDIKI 104

Query: 107 EATMFDGAVPAPRSSGGVANADEMQLHITLIVSISKGDGG-VLEITCSAWPDTIEIKRLL 165
           EATMFDG    P + G  ++   ++LH++LIV ISKG+GG  LE  CSAWPD+++++++ 
Sbjct: 105 EATMFDGFEHVP-AYGDDSSGVNVRLHLSLIVDISKGEGGNELEFVCSAWPDSLDVQKVF 163

Query: 166 TRAKEKMPAEPYAGPXXXXXXXXXXXXXXXXXEVRGVDDELAIFLHQYMKRKDKSELVGW 225
              + KM   PY GP                 + RGV++EL+ FLH+YM  KD+ EL+ W
Sbjct: 164 MLKRGKMSTRPYLGPDFRNLKPKIREKFCEYLDARGVNNELSAFLHEYMMNKDRIELLRW 223

Query: 226 MERVKSFIER 235
           M+R+KSF+E+
Sbjct: 224 MDRLKSFVEK 233


>Medtr7g063520.1 | glycoprotein family protein | HC |
           chr7:23164570-23167810 | 20130731
          Length = 254

 Score = 91.7 bits (226), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 98/200 (49%), Gaps = 13/200 (6%)

Query: 46  MRKSAFEGNITRLLRNEIQYELQSSPSDNPSNKFGS---FAVDGRPGERWITLRRQFANE 102
           + K+  +  + R+L +EI   L+ + S + + +F     F V+  PGER I L+RQF +E
Sbjct: 58  LAKTPADDTLLRVLNSEIDCALEDNDSLSANLEFPGDFPFEVEDNPGERTIQLKRQFEDE 117

Query: 103 DIKVEATMFDGAVPAPRSSGG------VANADEMQLHITLIVSISKGDGGVLEITCSAWP 156
            I V+    D    AP+ S        + N ++ +  I L+V++ KG+G  +E   +A+P
Sbjct: 118 TITVQV---DIPNVAPQQSEDEADPEKIENENDSESSIPLVVTVFKGNGVCMEFGVTAFP 174

Query: 157 DTIEIKRL-LTRAKEKMPAEPYAGPXXXXXXXXXXXXXXXXXEVRGVDDELAIFLHQYMK 215
           D + I  L +    E      Y GP                 E+RG+      FL +YM 
Sbjct: 175 DEVVIDSLSIKNPDESEDQLLYEGPEFTDLDENLQKAFLKYLEIRGITPNTTNFLQEYMF 234

Query: 216 RKDKSELVGWMERVKSFIER 235
            KD  E +GW++++KSFIE+
Sbjct: 235 NKDNKEYLGWLKKLKSFIEK 254


>Medtr5g080880.1 | glycoprotein family protein | HC |
           chr5:34639263-34644206 | 20130731
          Length = 331

 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 76/165 (46%), Gaps = 7/165 (4%)

Query: 75  PSNKFGSFAVDGRPGERWITLRRQFANEDIKVEATMFDGAVPAPRSSGGVANADE----M 130
           PSN    F +   PG + ITL+R +  E+I+VE  M D               DE     
Sbjct: 92  PSN--FPFKIVDNPGNQTITLKRTYQGEEIQVEVHMPDLVTGEEHDHQDDDKDDESERAT 149

Query: 131 QLHITLIVSISKGDGGVLEITCSAWPDTIEIKRLLTRAKEKMPAE-PYAGPXXXXXXXXX 189
           Q  I L VS+SK DG  LE +C A+PD I I  L  +  +    + PY GP         
Sbjct: 150 QSSIPLSVSVSKKDGPSLEFSCVAYPDEIVIDSLSVKNPDFSDEQIPYDGPDFQDLDEAL 209

Query: 190 XXXXXXXXEVRGVDDELAIFLHQYMKRKDKSELVGWMERVKSFIE 234
                   E+RG+      FLH+YM  KD  E + W+ ++K+FI+
Sbjct: 210 QKSFHKYLEIRGIKPSTTNFLHEYMINKDSREYLVWLNKLKNFIK 254


>Medtr5g080870.1 | glycoprotein family protein | LC |
           chr5:34633631-34637278 | 20130731
          Length = 337

 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 68/161 (42%), Gaps = 17/161 (10%)

Query: 75  PSNKFGSFAVDGRPGERWITLRRQFANEDIKVEATMFDGAVPAPRSSGGVANADEMQLHI 134
           PSN    F +   P  + I L+R +  E I+V+  M D  V          +    Q  I
Sbjct: 75  PSN--FPFKIVENPRNQTIILKRTYQGEKIEVKVHMVD-LVTGEEHDKDDESERATQSSI 131

Query: 135 TLIVSISKGDGGVLEITCSAWPDTIEIKRL-LTRAKEKMPAEPYAGPXXXXXXXXXXXXX 193
              VS+SK +G  LE  C A+PD +    L +T   E++P                    
Sbjct: 132 DFSVSVSKKNGTSLEFCCDAYPDEMVFSGLFITNRGEQIP-------------YYDRLDF 178

Query: 194 XXXXEVRGVDDELAIFLHQYMKRKDKSELVGWMERVKSFIE 234
               E+RG+      FL +YM ++   E + W+ ++K+FI+
Sbjct: 179 QYYLEIRGIKPSTTNFLQEYMIKRKSREYLVWLNKLKNFIK 219