Miyakogusa Predicted Gene

Lj3g3v2169480.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2169480.1 tr|I3SYN2|I3SYN2_LOTJA Golgi SNAP receptor
complex member 1 OS=Lotus japonicus PE=2 SV=1,99.11,0,V-SNARE_C,NULL;
GOS-28 SNARE- RELATED,Golgi SNAP receptor complex, subunit 1;
coiled-coil,NULL,CUFF.43592.1
         (224 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g006570.3 | SNAP receptor complex protein | HC | chr4:7549...   392   e-109
Medtr2g104910.1 | SNAP receptor complex protein | HC | chr2:4522...   374   e-104
Medtr4g006570.1 | SNAP receptor complex protein | HC | chr4:7586...   373   e-104
Medtr4g006570.2 | SNAP receptor complex protein | HC | chr4:7589...   372   e-103
Medtr4g006570.6 | SNAP receptor complex protein | HC | chr4:7589...   372   e-103
Medtr2g104910.2 | SNAP receptor complex protein | HC | chr2:4522...   359   e-100
Medtr4g006570.4 | SNAP receptor complex protein | HC | chr4:7535...   353   6e-98
Medtr4g006570.5 | SNAP receptor complex protein | HC | chr4:7589...   353   6e-98
Medtr4g025850.1 | SNAP receptor complex protein | HC | chr4:8848...   154   5e-38
Medtr4g025850.2 | SNAP receptor complex protein | HC | chr4:8848...    80   2e-15

>Medtr4g006570.3 | SNAP receptor complex protein | HC |
           chr4:754946-749536 | 20130731
          Length = 225

 Score =  392 bits (1008), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 190/225 (84%), Positives = 210/225 (93%), Gaps = 1/225 (0%)

Query: 1   MEVPS-SWDALRKQARNLEAQLDERMSSFRKLVSASVSAKTDAAENDLESWIEQLLKQLQ 59
           MEVP+ SWD+LRKQAR LEAQLDE+M+++RKLVS ++S K DAA++D+ESWIE+L+KQLQ
Sbjct: 1   MEVPTTSWDSLRKQARKLEAQLDEQMNAYRKLVSTNLSTKGDAAQSDVESWIERLIKQLQ 60

Query: 60  QVNSQMQAWVSSGGTDMVSHTLTRHQEILQDITQEFYRLRSSLRAKQEHASLLEDFKEFD 119
           QVNSQMQAWVSSGG+DMVSHTLTRHQEILQDITQEFYRLRSSLRAKQEHASLL+DFKEFD
Sbjct: 61  QVNSQMQAWVSSGGSDMVSHTLTRHQEILQDITQEFYRLRSSLRAKQEHASLLDDFKEFD 120

Query: 120 RTRLDLETGAGSEQHALLKERASISRNTGHVDTVISQAQATLGALVFQRSTFGGINSKIS 179
           RTRLDLE G  SEQH LLKE ASISRNTGH+D VISQAQATLGALVFQRSTFGGINSK+S
Sbjct: 121 RTRLDLEEGGESEQHTLLKENASISRNTGHMDGVISQAQATLGALVFQRSTFGGINSKLS 180

Query: 180 NVSGRLPTVNSILGAIKRKKSMDTIILSLVASVCIFLIFIYWLTK 224
           NVS RLPTVN+IL AIKRKKSMDT+ILSLVASVC FLI IYW+TK
Sbjct: 181 NVSSRLPTVNNILSAIKRKKSMDTLILSLVASVCTFLILIYWITK 225


>Medtr2g104910.1 | SNAP receptor complex protein | HC |
           chr2:45225854-45221145 | 20130731
          Length = 223

 Score =  374 bits (960), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 183/224 (81%), Positives = 201/224 (89%), Gaps = 1/224 (0%)

Query: 1   MEVPSSWDALRKQARNLEAQLDERMSSFRKLVSASVSAKTDAAENDLESWIEQLLKQLQQ 60
           MEV S WD+LR QAR LEAQLDE+M  +RKLVS   S K +A E+DLESWIE+LL QL+Q
Sbjct: 1   MEVQS-WDSLRNQARKLEAQLDEQMVLYRKLVSTKASTKGEATESDLESWIERLLNQLKQ 59

Query: 61  VNSQMQAWVSSGGTDMVSHTLTRHQEILQDITQEFYRLRSSLRAKQEHASLLEDFKEFDR 120
           VNSQMQAWVSSGG++MVSHTLTRHQEI QD+TQEFYRLRS+LRAKQEHASLL+DFKE DR
Sbjct: 60  VNSQMQAWVSSGGSEMVSHTLTRHQEIYQDLTQEFYRLRSNLRAKQEHASLLDDFKELDR 119

Query: 121 TRLDLETGAGSEQHALLKERASISRNTGHVDTVISQAQATLGALVFQRSTFGGINSKISN 180
           TRLDLE G GSEQ  LLKERASISR+TG +DTVISQAQATLGALVFQRSTFGGINSK+SN
Sbjct: 120 TRLDLEEGGGSEQQNLLKERASISRSTGQMDTVISQAQATLGALVFQRSTFGGINSKLSN 179

Query: 181 VSGRLPTVNSILGAIKRKKSMDTIILSLVASVCIFLIFIYWLTK 224
           VS RLPTVN+IL AIKRKKSMDTIIL+LV SVC+FLIFIYWLTK
Sbjct: 180 VSSRLPTVNTILSAIKRKKSMDTIILALVGSVCVFLIFIYWLTK 223


>Medtr4g006570.1 | SNAP receptor complex protein | HC |
           chr4:758698-749919 | 20130731
          Length = 255

 Score =  373 bits (957), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 180/212 (84%), Positives = 198/212 (93%)

Query: 13  QARNLEAQLDERMSSFRKLVSASVSAKTDAAENDLESWIEQLLKQLQQVNSQMQAWVSSG 72
           QAR LEAQLDE+M+++RKLVS ++S K DAA++D+ESWIE+L+KQLQQVNSQMQAWVSSG
Sbjct: 44  QARKLEAQLDEQMNAYRKLVSTNLSTKGDAAQSDVESWIERLIKQLQQVNSQMQAWVSSG 103

Query: 73  GTDMVSHTLTRHQEILQDITQEFYRLRSSLRAKQEHASLLEDFKEFDRTRLDLETGAGSE 132
           G+DMVSHTLTRHQEILQDITQEFYRLRSSLRAKQEHASLL+DFKEFDRTRLDLE G  SE
Sbjct: 104 GSDMVSHTLTRHQEILQDITQEFYRLRSSLRAKQEHASLLDDFKEFDRTRLDLEEGGESE 163

Query: 133 QHALLKERASISRNTGHVDTVISQAQATLGALVFQRSTFGGINSKISNVSGRLPTVNSIL 192
           QH LLKE ASISRNTGH+D VISQAQATLGALVFQRSTFGGINSK+SNVS RLPTVN+IL
Sbjct: 164 QHTLLKENASISRNTGHMDGVISQAQATLGALVFQRSTFGGINSKLSNVSSRLPTVNNIL 223

Query: 193 GAIKRKKSMDTIILSLVASVCIFLIFIYWLTK 224
            AIKRKKSMDT+ILSLVASVC FLI IYW+TK
Sbjct: 224 SAIKRKKSMDTLILSLVASVCTFLILIYWITK 255


>Medtr4g006570.2 | SNAP receptor complex protein | HC |
           chr4:758919-749536 | 20130731
          Length = 241

 Score =  372 bits (956), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 180/212 (84%), Positives = 198/212 (93%)

Query: 13  QARNLEAQLDERMSSFRKLVSASVSAKTDAAENDLESWIEQLLKQLQQVNSQMQAWVSSG 72
           QAR LEAQLDE+M+++RKLVS ++S K DAA++D+ESWIE+L+KQLQQVNSQMQAWVSSG
Sbjct: 30  QARKLEAQLDEQMNAYRKLVSTNLSTKGDAAQSDVESWIERLIKQLQQVNSQMQAWVSSG 89

Query: 73  GTDMVSHTLTRHQEILQDITQEFYRLRSSLRAKQEHASLLEDFKEFDRTRLDLETGAGSE 132
           G+DMVSHTLTRHQEILQDITQEFYRLRSSLRAKQEHASLL+DFKEFDRTRLDLE G  SE
Sbjct: 90  GSDMVSHTLTRHQEILQDITQEFYRLRSSLRAKQEHASLLDDFKEFDRTRLDLEEGGESE 149

Query: 133 QHALLKERASISRNTGHVDTVISQAQATLGALVFQRSTFGGINSKISNVSGRLPTVNSIL 192
           QH LLKE ASISRNTGH+D VISQAQATLGALVFQRSTFGGINSK+SNVS RLPTVN+IL
Sbjct: 150 QHTLLKENASISRNTGHMDGVISQAQATLGALVFQRSTFGGINSKLSNVSSRLPTVNNIL 209

Query: 193 GAIKRKKSMDTIILSLVASVCIFLIFIYWLTK 224
            AIKRKKSMDT+ILSLVASVC FLI IYW+TK
Sbjct: 210 SAIKRKKSMDTLILSLVASVCTFLILIYWITK 241


>Medtr4g006570.6 | SNAP receptor complex protein | HC |
           chr4:758919-749536 | 20130731
          Length = 250

 Score =  372 bits (955), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 180/212 (84%), Positives = 198/212 (93%)

Query: 13  QARNLEAQLDERMSSFRKLVSASVSAKTDAAENDLESWIEQLLKQLQQVNSQMQAWVSSG 72
           QAR LEAQLDE+M+++RKLVS ++S K DAA++D+ESWIE+L+KQLQQVNSQMQAWVSSG
Sbjct: 39  QARKLEAQLDEQMNAYRKLVSTNLSTKGDAAQSDVESWIERLIKQLQQVNSQMQAWVSSG 98

Query: 73  GTDMVSHTLTRHQEILQDITQEFYRLRSSLRAKQEHASLLEDFKEFDRTRLDLETGAGSE 132
           G+DMVSHTLTRHQEILQDITQEFYRLRSSLRAKQEHASLL+DFKEFDRTRLDLE G  SE
Sbjct: 99  GSDMVSHTLTRHQEILQDITQEFYRLRSSLRAKQEHASLLDDFKEFDRTRLDLEEGGESE 158

Query: 133 QHALLKERASISRNTGHVDTVISQAQATLGALVFQRSTFGGINSKISNVSGRLPTVNSIL 192
           QH LLKE ASISRNTGH+D VISQAQATLGALVFQRSTFGGINSK+SNVS RLPTVN+IL
Sbjct: 159 QHTLLKENASISRNTGHMDGVISQAQATLGALVFQRSTFGGINSKLSNVSSRLPTVNNIL 218

Query: 193 GAIKRKKSMDTIILSLVASVCIFLIFIYWLTK 224
            AIKRKKSMDT+ILSLVASVC FLI IYW+TK
Sbjct: 219 SAIKRKKSMDTLILSLVASVCTFLILIYWITK 250


>Medtr2g104910.2 | SNAP receptor complex protein | HC |
           chr2:45223920-45221145 | 20130731
          Length = 212

 Score =  359 bits (922), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 174/211 (82%), Positives = 191/211 (90%)

Query: 14  ARNLEAQLDERMSSFRKLVSASVSAKTDAAENDLESWIEQLLKQLQQVNSQMQAWVSSGG 73
           AR LEAQLDE+M  +RKLVS   S K +A E+DLESWIE+LL QL+QVNSQMQAWVSSGG
Sbjct: 2   ARKLEAQLDEQMVLYRKLVSTKASTKGEATESDLESWIERLLNQLKQVNSQMQAWVSSGG 61

Query: 74  TDMVSHTLTRHQEILQDITQEFYRLRSSLRAKQEHASLLEDFKEFDRTRLDLETGAGSEQ 133
           ++MVSHTLTRHQEI QD+TQEFYRLRS+LRAKQEHASLL+DFKE DRTRLDLE G GSEQ
Sbjct: 62  SEMVSHTLTRHQEIYQDLTQEFYRLRSNLRAKQEHASLLDDFKELDRTRLDLEEGGGSEQ 121

Query: 134 HALLKERASISRNTGHVDTVISQAQATLGALVFQRSTFGGINSKISNVSGRLPTVNSILG 193
             LLKERASISR+TG +DTVISQAQATLGALVFQRSTFGGINSK+SNVS RLPTVN+IL 
Sbjct: 122 QNLLKERASISRSTGQMDTVISQAQATLGALVFQRSTFGGINSKLSNVSSRLPTVNTILS 181

Query: 194 AIKRKKSMDTIILSLVASVCIFLIFIYWLTK 224
           AIKRKKSMDTIIL+LV SVC+FLIFIYWLTK
Sbjct: 182 AIKRKKSMDTIILALVGSVCVFLIFIYWLTK 212


>Medtr4g006570.4 | SNAP receptor complex protein | HC |
           chr4:753529-749619 | 20130731
          Length = 200

 Score =  353 bits (906), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 170/200 (85%), Positives = 187/200 (93%)

Query: 25  MSSFRKLVSASVSAKTDAAENDLESWIEQLLKQLQQVNSQMQAWVSSGGTDMVSHTLTRH 84
           M+++RKLVS ++S K DAA++D+ESWIE+L+KQLQQVNSQMQAWVSSGG+DMVSHTLTRH
Sbjct: 1   MNAYRKLVSTNLSTKGDAAQSDVESWIERLIKQLQQVNSQMQAWVSSGGSDMVSHTLTRH 60

Query: 85  QEILQDITQEFYRLRSSLRAKQEHASLLEDFKEFDRTRLDLETGAGSEQHALLKERASIS 144
           QEILQDITQEFYRLRSSLRAKQEHASLL+DFKEFDRTRLDLE G  SEQH LLKE ASIS
Sbjct: 61  QEILQDITQEFYRLRSSLRAKQEHASLLDDFKEFDRTRLDLEEGGESEQHTLLKENASIS 120

Query: 145 RNTGHVDTVISQAQATLGALVFQRSTFGGINSKISNVSGRLPTVNSILGAIKRKKSMDTI 204
           RNTGH+D VISQAQATLGALVFQRSTFGGINSK+SNVS RLPTVN+IL AIKRKKSMDT+
Sbjct: 121 RNTGHMDGVISQAQATLGALVFQRSTFGGINSKLSNVSSRLPTVNNILSAIKRKKSMDTL 180

Query: 205 ILSLVASVCIFLIFIYWLTK 224
           ILSLVASVC FLI IYW+TK
Sbjct: 181 ILSLVASVCTFLILIYWITK 200


>Medtr4g006570.5 | SNAP receptor complex protein | HC |
           chr4:758919-749536 | 20130731
          Length = 200

 Score =  353 bits (906), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 170/200 (85%), Positives = 187/200 (93%)

Query: 25  MSSFRKLVSASVSAKTDAAENDLESWIEQLLKQLQQVNSQMQAWVSSGGTDMVSHTLTRH 84
           M+++RKLVS ++S K DAA++D+ESWIE+L+KQLQQVNSQMQAWVSSGG+DMVSHTLTRH
Sbjct: 1   MNAYRKLVSTNLSTKGDAAQSDVESWIERLIKQLQQVNSQMQAWVSSGGSDMVSHTLTRH 60

Query: 85  QEILQDITQEFYRLRSSLRAKQEHASLLEDFKEFDRTRLDLETGAGSEQHALLKERASIS 144
           QEILQDITQEFYRLRSSLRAKQEHASLL+DFKEFDRTRLDLE G  SEQH LLKE ASIS
Sbjct: 61  QEILQDITQEFYRLRSSLRAKQEHASLLDDFKEFDRTRLDLEEGGESEQHTLLKENASIS 120

Query: 145 RNTGHVDTVISQAQATLGALVFQRSTFGGINSKISNVSGRLPTVNSILGAIKRKKSMDTI 204
           RNTGH+D VISQAQATLGALVFQRSTFGGINSK+SNVS RLPTVN+IL AIKRKKSMDT+
Sbjct: 121 RNTGHMDGVISQAQATLGALVFQRSTFGGINSKLSNVSSRLPTVNNILSAIKRKKSMDTL 180

Query: 205 ILSLVASVCIFLIFIYWLTK 224
           ILSLVASVC FLI IYW+TK
Sbjct: 181 ILSLVASVCTFLILIYWITK 200


>Medtr4g025850.1 | SNAP receptor complex protein | HC |
           chr4:8848929-8855352 | 20130731
          Length = 240

 Score =  154 bits (390), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 88/235 (37%), Positives = 136/235 (57%), Gaps = 21/235 (8%)

Query: 5   SSWDALRKQARNLEAQLDERMSSFRKLVS----------ASVSAKTDAAENDLESWIEQL 54
           S W+ LRK+AR +E  LD ++SS+ KL +           S S  +  +   +E  I+ L
Sbjct: 12  SGWEELRKEARKIEGDLDVKLSSYAKLGARFTQGGYVEGGSPSVGSSRSWKSMEMEIQSL 71

Query: 55  LKQLQQVNSQM-QAWVSSGGTDMVSHTLTRHQEILQDITQEFYRLRSSLRAKQEHASLL- 112
           L++L  +N  M +   S+G    V+  L RH++IL + TQEF R + ++ + +EHA LL 
Sbjct: 72  LEKLLDINDSMSRCAASAGPATSVTQKLARHRDILHEFTQEFRRTKGNINSMKEHAELLG 131

Query: 113 ---EDFKEFDRTRLDLETGAGSEQHALLKERASISRNTGHVDTVISQAQATLGALVFQRS 169
              +D  +F        +G+ S +  LL+ERA+I  +T H+D VISQAQAT   L  QR+
Sbjct: 132 SVRDDISDFK------ASGSMSPRMQLLRERAAIHGSTSHIDEVISQAQATRAVLGSQRA 185

Query: 170 TFGGINSKISNVSGRLPTVNSILGAIKRKKSMDTIILSLVASVCIFLIFIYWLTK 224
            FG +  K+  +  + P + S+LG+I+R+KS DT+ILS V + C   + IYWL+K
Sbjct: 186 LFGDVQGKVRLLGDKFPIIRSLLGSIRRRKSRDTLILSAVIAACTLFLIIYWLSK 240


>Medtr4g025850.2 | SNAP receptor complex protein | HC |
           chr4:8848962-8855193 | 20130731
          Length = 192

 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/172 (31%), Positives = 91/172 (52%), Gaps = 21/172 (12%)

Query: 5   SSWDALRKQARNLEAQLDERMSSFRKLVS----------ASVSAKTDAAENDLESWIEQL 54
           S W+ LRK+AR +E  LD ++SS+ KL +           S S  +  +   +E  I+ L
Sbjct: 12  SGWEELRKEARKIEGDLDVKLSSYAKLGARFTQGGYVEGGSPSVGSSRSWKSMEMEIQSL 71

Query: 55  LKQLQQVNSQM-QAWVSSGGTDMVSHTLTRHQEILQDITQEFYRLRSSLRAKQEHASLL- 112
           L++L  +N  M +   S+G    V+  L RH++IL + TQEF R + ++ + +EHA LL 
Sbjct: 72  LEKLLDINDSMSRCAASAGPATSVTQKLARHRDILHEFTQEFRRTKGNINSMKEHAELLG 131

Query: 113 ---EDFKEFDRTRLDLETGAGSEQHALLKERASISRNTGHVDTVISQAQATL 161
              +D  +F        +G+ S +  LL+ERA+I  +T H+  ++   Q  L
Sbjct: 132 SVRDDISDFK------ASGSMSPRMQLLRERAAIHGSTSHMKLLVKLKQQEL 177