Miyakogusa Predicted Gene

Lj3g3v2168430.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2168430.2 tr|I3SEH4|I3SEH4_LOTJA 40S ribosomal protein S12
OS=Lotus japonicus PE=2 SV=1,99.29,0,Ribosomal_L7Ae,Ribosomal protein
L7Ae/L30e/S12e/Gadd45; RIBSOMALS12E,Ribosomal protein S12e;
seg,NUL,CUFF.43949.2
         (140 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g012890.1 | ribosomal protein L7Ae/L30e/S12e/Gadd45 family...   249   6e-67
Medtr4g006830.1 | ribosomal protein L7Ae/L30e/S12e/Gadd45 family...   243   4e-65
Medtr8g093770.1 | ribosomal protein L7Ae/L30e/S12e/Gadd45 family...   242   9e-65
Medtr5g012890.2 | ribosomal protein L7Ae/L30e/S12e/Gadd45 family...   176   6e-45
Medtr4g073510.1 | synaptotagmin, putative | HC | chr4:27865281-2...    59   1e-09

>Medtr5g012890.1 | ribosomal protein L7Ae/L30e/S12e/Gadd45 family
           protein | HC | chr5:3976865-3978915 | 20130731
          Length = 142

 Score =  249 bits (636), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 121/122 (99%), Positives = 121/122 (99%)

Query: 19  IPGEPMDIMTALQLVLRKSRAYGGLARGLHEGAKVIEKHAGQLCVLAEDCDQPDYVKLVK 78
           IPGEPMDIMTALQLVLRKSRAYGGLARGLHEGAKVIEKHA QLCVLAEDCDQPDYVKLVK
Sbjct: 18  IPGEPMDIMTALQLVLRKSRAYGGLARGLHEGAKVIEKHAAQLCVLAEDCDQPDYVKLVK 77

Query: 79  ALCAEHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVTGCSCVVVKDFGEEHEAYNVVLQ 138
           ALCAEHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVTGCSCVVVKDFGEEHEAYNVVLQ
Sbjct: 78  ALCAEHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVTGCSCVVVKDFGEEHEAYNVVLQ 137

Query: 139 HV 140
           HV
Sbjct: 138 HV 139


>Medtr4g006830.1 | ribosomal protein L7Ae/L30e/S12e/Gadd45 family
           protein | HC | chr4:824939-827878 | 20130731
          Length = 144

 Score =  243 bits (620), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 119/122 (97%), Positives = 120/122 (98%)

Query: 19  IPGEPMDIMTALQLVLRKSRAYGGLARGLHEGAKVIEKHAGQLCVLAEDCDQPDYVKLVK 78
           IPGEPMDIMTALQLVLRKS AYGGLARGLHEGAKVIEK+ GQLCVLAEDCDQPDYVKLVK
Sbjct: 20  IPGEPMDIMTALQLVLRKSLAYGGLARGLHEGAKVIEKNTGQLCVLAEDCDQPDYVKLVK 79

Query: 79  ALCAEHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVTGCSCVVVKDFGEEHEAYNVVLQ 138
           ALCAEHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVTGCSCVVVKDFGEEHEAYNVVLQ
Sbjct: 80  ALCAEHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVTGCSCVVVKDFGEEHEAYNVVLQ 139

Query: 139 HV 140
           HV
Sbjct: 140 HV 141


>Medtr8g093770.1 | ribosomal protein L7Ae/L30e/S12e/Gadd45 family
           protein | HC | chr8:39234618-39232241 | 20130731
          Length = 143

 Score =  242 bits (617), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 117/122 (95%), Positives = 120/122 (98%)

Query: 19  IPGEPMDIMTALQLVLRKSRAYGGLARGLHEGAKVIEKHAGQLCVLAEDCDQPDYVKLVK 78
           IPGEPMDIMTA+QLVLRKSRAYGGLARGLHE AKVIEKHA QLCVLAEDCDQPDYVKLVK
Sbjct: 19  IPGEPMDIMTAVQLVLRKSRAYGGLARGLHESAKVIEKHAAQLCVLAEDCDQPDYVKLVK 78

Query: 79  ALCAEHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVTGCSCVVVKDFGEEHEAYNVVLQ 138
           ALCAEH+VSLLTVP+AKTLGEWAGLCKIDSEGKARKVTGCSCVVVKDFGEEHEAYNVVLQ
Sbjct: 79  ALCAEHSVSLLTVPNAKTLGEWAGLCKIDSEGKARKVTGCSCVVVKDFGEEHEAYNVVLQ 138

Query: 139 HV 140
           HV
Sbjct: 139 HV 140


>Medtr5g012890.2 | ribosomal protein L7Ae/L30e/S12e/Gadd45 family
           protein | HC | chr5:3976931-3978859 | 20130731
          Length = 107

 Score =  176 bits (446), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 85/90 (94%), Positives = 87/90 (96%)

Query: 19  IPGEPMDIMTALQLVLRKSRAYGGLARGLHEGAKVIEKHAGQLCVLAEDCDQPDYVKLVK 78
           IPGEPMDIMTALQLVLRKSRAYGGLARGLHEGAKVIEKHA QLCVLAEDCDQPDYVKLVK
Sbjct: 18  IPGEPMDIMTALQLVLRKSRAYGGLARGLHEGAKVIEKHAAQLCVLAEDCDQPDYVKLVK 77

Query: 79  ALCAEHNVSLLTVPSAKTLGEWAGLCKIDS 108
           ALCAEHNVSLLTVPSAKTLGEWAG+  +DS
Sbjct: 78  ALCAEHNVSLLTVPSAKTLGEWAGVSDLDS 107


>Medtr4g073510.1 | synaptotagmin, putative | HC |
          chr4:27865281-27857224 | 20130731
          Length = 411

 Score = 59.3 bits (142), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 26/35 (74%), Positives = 29/35 (82%)

Query: 19 IPGEPMDIMTALQLVLRKSRAYGGLARGLHEGAKV 53
          IP EPMDI+T  QL+LRKS AYGG+AR LHEGAK 
Sbjct: 20 IPNEPMDIVTPFQLLLRKSLAYGGIARDLHEGAKT 54