Miyakogusa Predicted Gene
- Lj3g3v2098140.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2098140.1 Non Characterized Hit- tr|I1KGT2|I1KGT2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.15645
PE,79.53,0,Adenine_glyco,Methyladenine glycosylase; seg,NULL; no
description,DNA glycosylase; SUBFAMILY NOT NAM,CUFF.43580.1
(381 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g007070.1 | DNA-3-methyladenine glycosylase I | HC | chr4:... 470 e-133
Medtr4g130880.1 | DNA-3-methyladenine glycosylase I | HC | chr4:... 347 9e-96
Medtr3g111690.1 | DNA-3-methyladenine glycosylase I | HC | chr3:... 264 1e-70
Medtr0009s0230.1 | DNA-3-methyladenine glycosylase I | HC | scaf... 243 2e-64
Medtr0009s0230.2 | DNA-3-methyladenine glycosylase I | HC | scaf... 239 4e-63
Medtr2g063510.1 | DNA-3-methyladenine glycosylase I | HC | chr2:... 224 1e-58
Medtr8g447000.1 | DNA-3-methyladenine glycosylase I | HC | chr8:... 222 5e-58
Medtr8g066040.1 | DNA-3-methyladenine glycosylase I | HC | chr8:... 209 3e-54
Medtr4g130880.2 | DNA-3-methyladenine glycosylase I | HC | chr4:... 193 2e-49
Medtr2g063510.2 | DNA-3-methyladenine glycosylase I | HC | chr2:... 109 5e-24
Medtr8g447000.2 | DNA-3-methyladenine glycosylase I | HC | chr8:... 106 4e-23
>Medtr4g007070.1 | DNA-3-methyladenine glycosylase I | HC |
chr4:935811-930134 | 20130731
Length = 365
Score = 470 bits (1210), Expect = e-133, Method: Compositional matrix adjust.
Identities = 252/383 (65%), Positives = 279/383 (72%), Gaps = 21/383 (5%)
Query: 1 MSGPPRVRSMNVAVG-DHEARPVLVPACNKARPAAVDGRKPVKKSVLEREREKSRGAPPT 59
MSGPPRVRSMNV VG D +++ ARP K VKK V E EK + T
Sbjct: 1 MSGPPRVRSMNVTVGADSDSK--------AARPV-----KNVKKPVPAPETEKKK----T 43
Query: 60 PPQRVLVSPVVSRRQDHHHLAVLKNLXXXXXXXXXXXXXXXXXXXXXXXXXXKVARRVRK 119
PQ V+V+P V +R+DH + +KN+ KVARRV K
Sbjct: 44 SPQCVVVTPAVLKRRDHCGVVGMKNMSMNASCSSDASSTDSSACSSGASSSGKVARRVGK 103
Query: 120 KQAGARTEKXXXXXXXXXXXXXXXXXXXGLESKKRCAWVTANTEPCYIAFHDEEWGVPVH 179
KQ GA+ EK GLE KKRCAWVT NTEPCYIAFHDEEWGVP+H
Sbjct: 104 KQVGAKVEKVSIDAVVAVPAPVEVESIDGLEGKKRCAWVTPNTEPCYIAFHDEEWGVPIH 163
Query: 180 DDKKLFELLSFSGALAELTWPTILSKRQLFREVFLDFDPNVVSKMNEKKIVAPGNSACTL 239
DDKKLFELLSFSGALAEL+WPTIL KRQLFR+VFLDFDP VS+MNEKKIVAPG+ A +L
Sbjct: 164 DDKKLFELLSFSGALAELSWPTILGKRQLFRKVFLDFDPCAVSRMNEKKIVAPGSPASSL 223
Query: 240 LSELRLRSIIENARQMCKVIEEFGSFDTFIWNFVNNKPIVSQFRYARQVPVKSPKAEFIS 299
LSELRLRSIIENARQMCKVIEEFGSFD++IWNFVNNKPIVSQFRY RQVP KSPKAEFIS
Sbjct: 224 LSELRLRSIIENARQMCKVIEEFGSFDSYIWNFVNNKPIVSQFRYPRQVPAKSPKAEFIS 283
Query: 300 KDLVRRGFRSVGPTVIYTFMQVAGLTNDHLISCFRFKECT-SNAETVNKE-SSLNSKVKE 357
KDLV+RGFRSVGPTVIYTFMQVAGLTNDHLI CFRFKEC SNAE KE SSLNSKVKE
Sbjct: 284 KDLVKRGFRSVGPTVIYTFMQVAGLTNDHLIGCFRFKECIFSNAEAEGKESSSLNSKVKE 343
Query: 358 KANEEEPNEMGLLLAVNKLNFTS 380
K+N E+P +GLLL+VNKL+F+S
Sbjct: 344 KSN-EDPTNVGLLLSVNKLSFSS 365
>Medtr4g130880.1 | DNA-3-methyladenine glycosylase I | HC |
chr4:54548746-54544404 | 20130731
Length = 375
Score = 347 bits (891), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 191/388 (49%), Positives = 235/388 (60%), Gaps = 24/388 (6%)
Query: 2 SGPPRVRSMNVAVGDHEARPVLVPACNKARPAAV--DGRKPVKKSV-----LEREREKSR 54
SG PR+RSMNVA D EARPV PA NK + D KP++K+ ++ +EK
Sbjct: 4 SGGPRLRSMNVA--DSEARPVFGPAGNKTGSYSSRKDASKPLRKAEKLGKEVDLAKEKKE 61
Query: 55 GAPPTPPQRVLVSPVVSRRQDHHHLAVLKNLXXXXXXXXXXXXXXXXXXXXXXXXXXKVA 114
+P + VS V+ R + H + N
Sbjct: 62 ASPQS--HSASVSSVLRRHEQLLHSNLSMN-----------ASCSSDASTDSFHSRASTG 108
Query: 115 RRVRKKQAG-ARTEKXXXXXXXXXXXXXXXXXXXGLESKKRCAWVTANTEPCYIAFHDEE 173
R R G R G + KKRCAW+T NTEP Y FHDEE
Sbjct: 109 RLTRSNSYGLTRKRSVSKPRSVVSDGVLESPPPDGAQPKKRCAWITPNTEPYYATFHDEE 168
Query: 174 WGVPVHDDKKLFELLSFSGALAELTWPTILSKRQLFREVFLDFDPNVVSKMNEKKIVAPG 233
WGVPVHDDKKLFE+L S AL+ELTWP ILSKR +FREVF DFDP VSK+NEKK++ PG
Sbjct: 169 WGVPVHDDKKLFEVLVLSSALSELTWPAILSKRHIFREVFADFDPVAVSKLNEKKVITPG 228
Query: 234 NSACTLLSELRLRSIIENARQMCKVIEEFGSFDTFIWNFVNNKPIVSQFRYARQVPVKSP 293
+A +LLS+ +LR IIENARQ+ KVI EFGSFD +IW+FVN+KPI+S+FRY RQVPVK+P
Sbjct: 229 TTASSLLSDQKLRGIIENARQISKVIVEFGSFDNYIWSFVNHKPILSKFRYPRQVPVKTP 288
Query: 294 KAEFISKDLVRRGFRSVGPTVIYTFMQVAGLTNDHLISCFRFKECTSNAETVNKESSLNS 353
KAE ISKDLVRRGFR VGPTVIY+FMQV GLTNDHLISCFRF+EC + AE + S N
Sbjct: 289 KAEVISKDLVRRGFRGVGPTVIYSFMQVVGLTNDHLISCFRFQECVAAAEGKEENSIKNE 348
Query: 354 KVKEKANEEEPNEMGLLLAVNKLNFTSK 381
+ A + E L +A++ L+ +S+
Sbjct: 349 DAQPNACDSV-MESDLSIAIDNLSLSSE 375
>Medtr3g111690.1 | DNA-3-methyladenine glycosylase I | HC |
chr3:52235165-52232483 | 20130731
Length = 331
Score = 264 bits (674), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 120/206 (58%), Positives = 158/206 (76%), Gaps = 6/206 (2%)
Query: 153 KRCAWVTANTEPCYIAFHDEEWGVPV-HDDKKLFELLSFSGALAELTWPTILSKRQLFRE 211
KRC W+T N +P Y AFHD+EWGVPV DD+KLFELL FS ALAE TWPTIL+ R +FR+
Sbjct: 128 KRCDWITPNADPLYTAFHDDEWGVPVLDDDRKLFELLVFSQALAEHTWPTILNHRDIFRK 187
Query: 212 VFLDFDPNVVSKMNEKKIVAPGNSACTLLSELRLRSIIENARQMCKVIEEFGSFDTFIWN 271
+F +FDP+ +++ EK +V P + LLSE +LR+++ENA+Q K+ EFGSF + W
Sbjct: 188 LFENFDPSSIAQFTEKNLVTPKLNGNPLLSEQKLRAVVENAKQFLKIQLEFGSFSNYCWK 247
Query: 272 FVNNKPIVSQFRYARQVPVKSPKAEFISKDLVRRGFRSVGPTVIYTFMQVAGLTNDHLIS 331
FVNNKPI ++FRY RQVPVK+PKAE ISKD++RRGF+ VGP V+Y+FMQVAGL NDHLI+
Sbjct: 248 FVNNKPIKNEFRYGRQVPVKNPKAELISKDMMRRGFQCVGPKVVYSFMQVAGLVNDHLIT 307
Query: 332 CFRFKECTSNAETVNKESSLNSKVKE 357
CFR++EC V ++ + ++VKE
Sbjct: 308 CFRYQEC-----NVAIKTEIKTEVKE 328
>Medtr0009s0230.1 | DNA-3-methyladenine glycosylase I | HC |
scaffold0009:104042-101934 | 20130731
Length = 308
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 100/191 (52%), Positives = 148/191 (77%)
Query: 153 KRCAWVTANTEPCYIAFHDEEWGVPVHDDKKLFELLSFSGALAELTWPTILSKRQLFREV 212
KRC+W+T N + YI FHDE WGVP +DDKKLFELL+ SG L + W IL ++++ R+V
Sbjct: 112 KRCSWITKNCDKAYIEFHDECWGVPAYDDKKLFELLALSGLLIDYNWTEILKRKEVLRQV 171
Query: 213 FLDFDPNVVSKMNEKKIVAPGNSACTLLSELRLRSIIENARQMCKVIEEFGSFDTFIWNF 272
F FDP VSKM EK+++ ++ +L+E R++ I++NA+ M K+ EFGSF ++IW++
Sbjct: 172 FAGFDPYTVSKMEEKEVIDIASATELVLAECRVKCIVDNAKCMMKIRREFGSFSSYIWSY 231
Query: 273 VNNKPIVSQFRYARQVPVKSPKAEFISKDLVRRGFRSVGPTVIYTFMQVAGLTNDHLISC 332
VN+KP+++++RY+R VP+++PKA+ ISKDL++RGFR +GP ++Y+FMQVAGLT DHL+ C
Sbjct: 232 VNHKPVINKYRYSRDVPLRTPKADAISKDLLKRGFRYLGPVIVYSFMQVAGLTIDHLVGC 291
Query: 333 FRFKECTSNAE 343
+R KEC + AE
Sbjct: 292 YRHKECVNLAE 302
>Medtr0009s0230.2 | DNA-3-methyladenine glycosylase I | HC |
scaffold0009:104053-101904 | 20130731
Length = 307
Score = 239 bits (609), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 100/191 (52%), Positives = 148/191 (77%), Gaps = 1/191 (0%)
Query: 153 KRCAWVTANTEPCYIAFHDEEWGVPVHDDKKLFELLSFSGALAELTWPTILSKRQLFREV 212
KRC+W+T N + YI FHDE WGVP +DDKKLFELL+ SG L + W IL ++++ R+V
Sbjct: 112 KRCSWITKNYKA-YIEFHDECWGVPAYDDKKLFELLALSGLLIDYNWTEILKRKEVLRQV 170
Query: 213 FLDFDPNVVSKMNEKKIVAPGNSACTLLSELRLRSIIENARQMCKVIEEFGSFDTFIWNF 272
F FDP VSKM EK+++ ++ +L+E R++ I++NA+ M K+ EFGSF ++IW++
Sbjct: 171 FAGFDPYTVSKMEEKEVIDIASATELVLAECRVKCIVDNAKCMMKIRREFGSFSSYIWSY 230
Query: 273 VNNKPIVSQFRYARQVPVKSPKAEFISKDLVRRGFRSVGPTVIYTFMQVAGLTNDHLISC 332
VN+KP+++++RY+R VP+++PKA+ ISKDL++RGFR +GP ++Y+FMQVAGLT DHL+ C
Sbjct: 231 VNHKPVINKYRYSRDVPLRTPKADAISKDLLKRGFRYLGPVIVYSFMQVAGLTIDHLVGC 290
Query: 333 FRFKECTSNAE 343
+R KEC + AE
Sbjct: 291 YRHKECVNLAE 301
>Medtr2g063510.1 | DNA-3-methyladenine glycosylase I | HC |
chr2:26805019-26800818 | 20130731
Length = 390
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 95/190 (50%), Positives = 141/190 (74%), Gaps = 2/190 (1%)
Query: 150 ESKKRCAWVTANTEPCYIAFHDEEWGVPVHDDKKLFELLSFSGALAELTWPTILSKRQLF 209
+ +KRC+++T N++P YIA+HDEEWGVPVHDDK LFELL SGA W + L KR F
Sbjct: 198 QEEKRCSFITTNSDPIYIAYHDEEWGVPVHDDKMLFELLILSGAQVGSDWTSTLKKRLDF 257
Query: 210 REVFLDFDPNVVSKMNEKKIVAPGNSACTLLSELRLRSIIENARQMCKVIEEFGSFDTFI 269
R F +FD +V+ + +K++++ + +S ++R +++NA Q+ +V + FGSFD +I
Sbjct: 258 RAAFSEFDAEIVANLTDKQMMSISSEYGIDIS--KVRGVVDNANQILQVRKGFGSFDKYI 315
Query: 270 WNFVNNKPIVSQFRYARQVPVKSPKAEFISKDLVRRGFRSVGPTVIYTFMQVAGLTNDHL 329
W FVN+KPI +Q+++ ++PVK+ K+E ISKD+++RGFR VGPTV+++FMQ AGLTNDHL
Sbjct: 316 WGFVNHKPISNQYKFGHKIPVKTSKSESISKDMIKRGFRYVGPTVVHSFMQAAGLTNDHL 375
Query: 330 ISCFRFKECT 339
I+C R +CT
Sbjct: 376 ITCHRHLQCT 385
>Medtr8g447000.1 | DNA-3-methyladenine glycosylase I | HC |
chr8:18418523-18415122 | 20130731
Length = 383
Score = 222 bits (565), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 96/190 (50%), Positives = 140/190 (73%), Gaps = 2/190 (1%)
Query: 150 ESKKRCAWVTANTEPCYIAFHDEEWGVPVHDDKKLFELLSFSGALAELTWPTILSKRQLF 209
E +KRC+++T N++P YIA+HDEEWGVPVHDDK LFELL SGA W +IL KRQ F
Sbjct: 192 EEEKRCSFITPNSDPIYIAYHDEEWGVPVHDDKMLFELLVLSGAQVGSDWTSILKKRQDF 251
Query: 210 REVFLDFDPNVVSKMNEKKIVAPGNSACTLLSELRLRSIIENARQMCKVIEEFGSFDTFI 269
R F +F ++ + +K++++ +S R+R +++NA ++ +V ++FGSFD +I
Sbjct: 252 RTAFSEFHAATLANLTDKQMLSISLEYGIDIS--RVRGVVDNANRILEVNKDFGSFDKYI 309
Query: 270 WNFVNNKPIVSQFRYARQVPVKSPKAEFISKDLVRRGFRSVGPTVIYTFMQVAGLTNDHL 329
W FVN+KPI +Q+++ ++PVK+ K+E ISKD++RRGFR VGPTV+++FMQ AGLTNDHL
Sbjct: 310 WGFVNHKPISTQYKFGHKIPVKTSKSESISKDMIRRGFRFVGPTVVHSFMQAAGLTNDHL 369
Query: 330 ISCFRFKECT 339
I+C +CT
Sbjct: 370 ITCHSHLKCT 379
>Medtr8g066040.1 | DNA-3-methyladenine glycosylase I | HC |
chr8:27430410-27434638 | 20130731
Length = 329
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 98/208 (47%), Positives = 138/208 (66%), Gaps = 17/208 (8%)
Query: 153 KRCAWVTANTEPCYIAFHDEEWGVPVHDDKKLFELLSFSGALAELTWPTILSKRQLFREV 212
+RC W+T N++ Y+ FHDE WGVP +DD KLFE+L+ SG L + W I+ +R+ REV
Sbjct: 116 RRCNWITKNSDKLYVEFHDECWGVPAYDDNKLFEMLAMSGLLMDYNWTEIIKRREPLREV 175
Query: 213 FLDFDPNVVSKMNEKKIV-APGNSACTLL--------------SELRLRSIIENARQMCK 257
F FDP V+KM E++I+ N A +L + LRLRS A +
Sbjct: 176 FAGFDPYTVAKMEEQEIIEITSNKALSLADSRVMCIVDNVSFGATLRLRSYGYGAGFLVN 235
Query: 258 --VIEEFGSFDTFIWNFVNNKPIVSQFRYARQVPVKSPKAEFISKDLVRRGFRSVGPTVI 315
V+ E GSF ++IW+FVN+KPI+++++Y R VP++SPKAE +SKD+V+RGFR VGP ++
Sbjct: 236 TPVVRECGSFSSYIWSFVNHKPIINKYKYPRNVPLRSPKAEALSKDMVKRGFRFVGPVIV 295
Query: 316 YTFMQVAGLTNDHLISCFRFKECTSNAE 343
++FMQ AGLT DHL+ C+R EC S AE
Sbjct: 296 HSFMQAAGLTIDHLVDCYRHSECVSLAE 323
>Medtr4g130880.2 | DNA-3-methyladenine glycosylase I | HC |
chr4:54548746-54544404 | 20130731
Length = 265
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 115/266 (43%), Positives = 142/266 (53%), Gaps = 23/266 (8%)
Query: 2 SGPPRVRSMNVAVGDHEARPVLVPACNKARPAAV--DGRKPVKKSV-----LEREREKSR 54
SG PR+RSMNVA D EARPV PA NK + D KP++K+ ++ +EK
Sbjct: 4 SGGPRLRSMNVA--DSEARPVFGPAGNKTGSYSSRKDASKPLRKAEKLGKEVDLAKEKKE 61
Query: 55 GAPPTPPQRVLVSPVVSRRQDHHHLAVLKNLXXXXXXXXXXXXXXXXXXXXXXXXXXKVA 114
+P + VS V+ R + H + N
Sbjct: 62 ASPQS--HSASVSSVLRRHEQLLHSNLSMN-----------ASCSSDASTDSFHSRASTG 108
Query: 115 RRVRKKQAG-ARTEKXXXXXXXXXXXXXXXXXXXGLESKKRCAWVTANTEPCYIAFHDEE 173
R R G R G + KKRCAW+T NTEP Y FHDEE
Sbjct: 109 RLTRSNSYGLTRKRSVSKPRSVVSDGVLESPPPDGAQPKKRCAWITPNTEPYYATFHDEE 168
Query: 174 WGVPVHDDKKLFELLSFSGALAELTWPTILSKRQLFREVFLDFDPNVVSKMNEKKIVAPG 233
WGVPVHDDKKLFE+L S AL+ELTWP ILSKR +FREVF DFDP VSK+NEKK++ PG
Sbjct: 169 WGVPVHDDKKLFEVLVLSSALSELTWPAILSKRHIFREVFADFDPVAVSKLNEKKVITPG 228
Query: 234 NSACTLLSELRLRSIIENARQMCKVI 259
+A +LLS+ +LR IIENARQ+ KV+
Sbjct: 229 TTASSLLSDQKLRGIIENARQISKVL 254
>Medtr2g063510.2 | DNA-3-methyladenine glycosylase I | HC |
chr2:26804984-26802744 | 20130731
Length = 316
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 78/118 (66%), Gaps = 4/118 (3%)
Query: 150 ESKKRCAWVTANTEPCYIAFHDEEWGVPVHDDKKLFELLSFSGALAELTWPTILSKRQLF 209
+ +KRC+++T N++P YIA+HDEEWGVPVHDDK LFELL SGA W + L KR F
Sbjct: 198 QEEKRCSFITTNSDPIYIAYHDEEWGVPVHDDKMLFELLILSGAQVGSDWTSTLKKRLDF 257
Query: 210 REVFLDFDPNVVSKMNEKKIVAPGNSACTLLSELRLRSIIENARQMCKVIEE--FGSF 265
R F +FD +V+ + +K++++ + +S ++R +++NA Q+ +V + F SF
Sbjct: 258 RAAFSEFDAEIVANLTDKQMMSISSEYGIDIS--KVRGVVDNANQILQVNKNVPFSSF 313
>Medtr8g447000.2 | DNA-3-methyladenine glycosylase I | HC |
chr8:18418617-18415158 | 20130731
Length = 323
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 73/109 (66%), Gaps = 2/109 (1%)
Query: 150 ESKKRCAWVTANTEPCYIAFHDEEWGVPVHDDKKLFELLSFSGALAELTWPTILSKRQLF 209
E +KRC+++T N++P YIA+HDEEWGVPVHDDK LFELL SGA W +IL KRQ F
Sbjct: 192 EEEKRCSFITPNSDPIYIAYHDEEWGVPVHDDKMLFELLVLSGAQVGSDWTSILKKRQDF 251
Query: 210 REVFLDFDPNVVSKMNEKKIVAPGNSACTLLSELRLRSIIENARQMCKV 258
R F +F ++ + +K++++ +S R+R +++NA ++ +V
Sbjct: 252 RTAFSEFHAATLANLTDKQMLSISLEYGIDIS--RVRGVVDNANRILEV 298