Miyakogusa Predicted Gene

Lj3g3v2062690.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2062690.1 Non Characterized Hit- tr|D7M093|D7M093_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,42.75,4e-18,seg,NULL,CUFF.43552.1
         (255 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g007710.1 | hypothetical protein | HC | chr4:1204102-11997...   399   e-111
Medtr4g130310.2 | hypothetical protein | HC | chr4:54285251-5428...   249   2e-66
Medtr4g130310.1 | hypothetical protein | HC | chr4:54285201-5428...   249   3e-66
Medtr4g130340.1 | hypothetical protein | LC | chr4:54298398-5430...   155   3e-38
Medtr1g084010.1 | hypothetical protein | HC | chr1:37445674-3744...   154   9e-38
Medtr6g013040.1 | hypothetical protein | LC | chr6:4076856-40782...   117   1e-26
Medtr6g013260.1 | hypothetical protein | LC | chr6:4178979-41776...   108   7e-24
Medtr4g113870.1 | hypothetical protein | HC | chr4:46868161-4686...    67   2e-11

>Medtr4g007710.1 | hypothetical protein | HC | chr4:1204102-1199740
           | 20130731
          Length = 525

 Score =  399 bits (1026), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 184/225 (81%), Positives = 199/225 (88%)

Query: 31  NFPGTVLKIGTWEYKSRYEGDLVAKCYFAKHKLVWEVLDGCLKNKIEIPWSDIMALKANY 90
           NFP TVLKIGTWEYKSRYEGDLVAKCYFAKHKLVWEVLDGCLKNKIEIPWSDIMALKANY
Sbjct: 116 NFPATVLKIGTWEYKSRYEGDLVAKCYFAKHKLVWEVLDGCLKNKIEIPWSDIMALKANY 175

Query: 91  PEDAPGTLEVVLARRPLFFREINPQPRKHTLWQATSDFTGGQASIQRRHFMQCPQGLLGK 150
           P+DAPGTLEV+LARRPLFFREINPQPRKHTLWQ+T+DFTGGQAS+ RRHF+QCPQGLLG+
Sbjct: 176 PDDAPGTLEVILARRPLFFREINPQPRKHTLWQSTTDFTGGQASMHRRHFVQCPQGLLGR 235

Query: 151 HFEKLIQCDPRLNFLSQQPELVLESPYFESGTAIHDHIESSDGFDSKSEEQPSLFGLHEV 210
           HFEKLIQCDPRLNFLSQQP+ VL+SPYFE+GTAIHDHIE SDG D +SE +  +FGLH+V
Sbjct: 236 HFEKLIQCDPRLNFLSQQPDFVLDSPYFETGTAIHDHIELSDGLDRRSEGKAGIFGLHDV 295

Query: 211 EXXXXXXXXXXXXEHNLMGKAVENVSQEITSPSTVMNSHAIKDFR 255
           E            E NLMGKAVEN  QEITSPS+VMN HAIK FR
Sbjct: 296 ESGSGGQSSSSRSEQNLMGKAVENNFQEITSPSSVMNPHAIKGFR 340


>Medtr4g130310.2 | hypothetical protein | HC |
           chr4:54285251-54289129 | 20130731
          Length = 495

 Score =  249 bits (635), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 111/153 (72%), Positives = 133/153 (86%)

Query: 31  NFPGTVLKIGTWEYKSRYEGDLVAKCYFAKHKLVWEVLDGCLKNKIEIPWSDIMALKANY 90
           NFP T LKIG+WEYKS+YEGDLVAKCYFAK KLVWEVL+G LK+KIEI WSDI  LKAN 
Sbjct: 109 NFPATHLKIGSWEYKSKYEGDLVAKCYFAKQKLVWEVLEGELKSKIEIQWSDISQLKANC 168

Query: 91  PEDAPGTLEVVLARRPLFFREINPQPRKHTLWQATSDFTGGQASIQRRHFMQCPQGLLGK 150
           P+D P TL +++AR+PLFFRE NPQPRKHTLWQ+T+DFTGGQASI RRH +QC QGLL K
Sbjct: 169 PDDGPSTLTLMVARQPLFFRETNPQPRKHTLWQSTTDFTGGQASIHRRHVLQCEQGLLIK 228

Query: 151 HFEKLIQCDPRLNFLSQQPELVLESPYFESGTA 183
           H+EKL+QC+ RL FLSQQPE++++SP+F+  +A
Sbjct: 229 HYEKLVQCNDRLKFLSQQPEIMVDSPHFDPRSA 261


>Medtr4g130310.1 | hypothetical protein | HC |
           chr4:54285201-54289456 | 20130731
          Length = 496

 Score =  249 bits (635), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 111/153 (72%), Positives = 133/153 (86%)

Query: 31  NFPGTVLKIGTWEYKSRYEGDLVAKCYFAKHKLVWEVLDGCLKNKIEIPWSDIMALKANY 90
           NFP T LKIG+WEYKS+YEGDLVAKCYFAK KLVWEVL+G LK+KIEI WSDI  LKAN 
Sbjct: 109 NFPATHLKIGSWEYKSKYEGDLVAKCYFAKQKLVWEVLEGELKSKIEIQWSDISQLKANC 168

Query: 91  PEDAPGTLEVVLARRPLFFREINPQPRKHTLWQATSDFTGGQASIQRRHFMQCPQGLLGK 150
           P+D P TL +++AR+PLFFRE NPQPRKHTLWQ+T+DFTGGQASI RRH +QC QGLL K
Sbjct: 169 PDDGPSTLTLMVARQPLFFRETNPQPRKHTLWQSTTDFTGGQASIHRRHVLQCEQGLLIK 228

Query: 151 HFEKLIQCDPRLNFLSQQPELVLESPYFESGTA 183
           H+EKL+QC+ RL FLSQQPE++++SP+F+  +A
Sbjct: 229 HYEKLVQCNDRLKFLSQQPEIMVDSPHFDPRSA 261


>Medtr4g130340.1 | hypothetical protein | LC |
           chr4:54298398-54300586 | 20130731
          Length = 292

 Score =  155 bits (392), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 81/169 (47%), Positives = 109/169 (64%), Gaps = 15/169 (8%)

Query: 31  NFPGTVLKIGTWEYKSRYEGDLVAKCYFAKHKLVWEVLDGCLKNKIEIPWSDIMALKANY 90
           NFP T LKIG+W+Y+ +YEGDLVAK  FAK K+VWEVL G LK+KIEI WSDI  LKAN 
Sbjct: 71  NFPATRLKIGSWKYEPKYEGDLVAKFCFAKKKIVWEVLVGELKSKIEIQWSDITQLKANC 130

Query: 91  PEDAPGTLEVVLARRPLFFREINPQPRKHTLWQATSD------------FTGGQASIQRR 138
           P D P +L +V+AR+PLFFR   P        Q ++D            F      + R 
Sbjct: 131 PNDGPSSLSLVVARQPLFFR---PTCTCIFFLQLSTDMWMCAQHVHAYSFKSTNGFVARW 187

Query: 139 HFMQCPQGLLGKHFEKLIQCDPRLNFLSQQPELVLESPYFESGTAIHDH 187
           HF++  QG L KHFE+L+Q    L FLS+QP+++L+SP+F++ +A  ++
Sbjct: 188 HFLKFEQGYLIKHFEQLVQYSEHLKFLSEQPDIMLDSPHFDTRSAASEN 236


>Medtr1g084010.1 | hypothetical protein | HC |
           chr1:37445674-37444166 | 20130731
          Length = 329

 Score =  154 bits (389), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 75/150 (50%), Positives = 103/150 (68%)

Query: 31  NFPGTVLKIGTWEYKSRYEGDLVAKCYFAKHKLVWEVLDGCLKNKIEIPWSDIMALKANY 90
           +FP  +L IG ++ +++Y  DLVAK Y+AK KLVWE+L   LK KIEI W +I A++A  
Sbjct: 26  HFPMYMLIIGFFKIEAKYPADLVAKFYYAKRKLVWEILRDGLKEKIEIHWQNISAIRAVL 85

Query: 91  PEDAPGTLEVVLARRPLFFREINPQPRKHTLWQATSDFTGGQASIQRRHFMQCPQGLLGK 150
            ++ PG LE+ L + P FFREI P+P KHT+W  + DFT GQAS  RRH++Q P G L +
Sbjct: 86  EDNLPGILEIELDKVPSFFREIEPKPGKHTVWTLSQDFTHGQASKYRRHYLQFPPGALDQ 145

Query: 151 HFEKLIQCDPRLNFLSQQPELVLESPYFES 180
           ++ KL+QCD RL  LSQ+P     + YF+S
Sbjct: 146 YYAKLLQCDNRLMELSQRPFPSSHAIYFDS 175


>Medtr6g013040.1 | hypothetical protein | LC | chr6:4076856-4078232
           | 20130731
          Length = 210

 Score =  117 bits (293), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 63/149 (42%), Positives = 94/149 (63%), Gaps = 11/149 (7%)

Query: 32  FPGTVLKIGTWEYKSRYEGDLVAKCYFAKHKLVWEVLDGC--LKNKIEIPWSDIMALKAN 89
           F  T+LKIG +E+KS+ E +LVA CYF   K +W +LD    +K KIEI W DI A++  
Sbjct: 50  FLATMLKIGAFEFKSQNEVNLVAHCYFEHQKFLWGMLDKSTNIKYKIEIMWQDISAIRIV 109

Query: 90  YPEDAPGTLEVVLARRPLFFREINPQPRKHTLWQATSDFTGGQASIQRRHFMQCPQGLLG 149
             E+ PG LE+ L ++P F+  IN +      W+++ DFT G A+I RRH+++ P G+  
Sbjct: 110 DEENKPGILEIELIKKPTFYHHINSK------WESSQDFTDGHAAIYRRHYLEFPPGV-- 161

Query: 150 KHFEKLIQCDPRLNFLSQQPELVLESPYF 178
            +F+KL+Q +  L  LSQ+P   L+S +F
Sbjct: 162 -NFKKLLQSNKHLLELSQRPFPSLDSSFF 189


>Medtr6g013260.1 | hypothetical protein | LC | chr6:4178979-4177697
           | 20130731
          Length = 226

 Score =  108 bits (269), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 60/149 (40%), Positives = 90/149 (60%), Gaps = 11/149 (7%)

Query: 32  FPGTVLKIGTWEYKSRYEGDLVAKCYFAKHKLVWEVLDGC--LKNKIEIPWSDIMALKAN 89
           F  T+LKIG +E+  R E +LVA CYF   K +W +LD    +K KIEI W DI A++  
Sbjct: 50  FLATLLKIGRFEFMPRNEVNLVAHCYFEHQKFLWGMLDKSTNIKYKIEIMWQDISAIRIV 109

Query: 90  YPEDAPGTLEVVLARRPLFFREINPQPRKHTLWQATSDFTGGQASIQRRHFMQCPQGLLG 149
             +  PG LE+ L + P F+  IN      ++W+++ DFT G A+I RRH+++ P  +  
Sbjct: 110 DEDKKPGILEIELIKVPTFYHHIN------SMWESSQDFTDGHAAICRRHYLEFPPKV-- 161

Query: 150 KHFEKLIQCDPRLNFLSQQPELVLESPYF 178
            +F+KL+Q +  L  LSQ+P   L+S +F
Sbjct: 162 -NFKKLLQSNKHLLELSQRPFPSLDSSFF 189


>Medtr4g113870.1 | hypothetical protein | HC |
           chr4:46868161-46867923 | 20130731
          Length = 62

 Score = 67.0 bits (162), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/45 (64%), Positives = 35/45 (77%), Gaps = 2/45 (4%)

Query: 102 LARRPLFFREINPQPRKHTLWQATSDFTGGQASIQR--RHFMQCP 144
           +AR+ LFFRE NPQPRKHT+WQ+T+DFT GQA+I R    F  CP
Sbjct: 15  VARQSLFFRETNPQPRKHTMWQSTTDFTNGQANIHRYIYSFYSCP 59