Miyakogusa Predicted Gene

Lj3g3v2058550.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2058550.1 Non Characterized Hit- tr|Q9C8H2|Q9C8H2_ARATH
Putative uncharacterized protein F19C24.21 (Fragment)
,100,0.00000000000004,no description,FMN-binding split barrel;
Pyrid_oxidase_2,NULL; CREG1 PROTEIN,NULL; seg,NULL;
FMN-bin,CUFF.43536.1
         (204 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g007990.1 | pyridoxamine 5'-phosphate oxidase family prote...   218   2e-57
Medtr7g085670.1 | root border cell-specific protein, putative | ...    59   3e-09
Medtr7g085670.2 | root border cell-specific protein, putative | ...    58   6e-09

>Medtr4g007990.1 | pyridoxamine 5'-phosphate oxidase family protein
           | HC | chr4:1348207-1342323 | 20130731
          Length = 386

 Score =  218 bits (556), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 129/220 (58%), Positives = 142/220 (64%), Gaps = 32/220 (14%)

Query: 3   MEALSIHPAAETHSLLH--RTPSSAVK----TPRTAFLRISHHPPS-------------- 42
           ME+LS      THS LH  RT SS        PR +FL+I+   PS              
Sbjct: 1   MESLS-----STHSTLHHHRTASSVAVGGGVAPRPSFLKINQLQPSNSSHSLVAPPLRLS 55

Query: 43  ----QDADEGNA-SGLASQPQEENLNHAETQSSDKDTVEPLQTSNMSWXXXXXXXXXXXX 97
               +D  E N    L S PQE NL+H+E+   D    E +QT  MSW            
Sbjct: 56  ALPNEDGGELNTFPALPSLPQE-NLSHSESIDDDDTHHEQIQT-GMSWSTITTPGGSGSG 113

Query: 98  XXXXXXLFRTPISGGVQSATSAHGLPRPALAVRNLMEQARFAHLCTVMSRMHHRREGYPF 157
                 LFRTPISGGVQSATSAHGLPRPALAVRNLMEQARFAHLC+VMSRMHHRREGYPF
Sbjct: 114 GGTRAGLFRTPISGGVQSATSAHGLPRPALAVRNLMEQARFAHLCSVMSRMHHRREGYPF 173

Query: 158 GSLVDFAPDSMGHPVFSFSPLAIHTRNLLANPRCTLVVQV 197
           GSLVDFAPDSMGHP+FSFSPLAIHTRNLLA+PRCTLVVQ+
Sbjct: 174 GSLVDFAPDSMGHPIFSFSPLAIHTRNLLADPRCTLVVQI 213


>Medtr7g085670.1 | root border cell-specific protein, putative | HC
           | chr7:33212985-33217524 | 20130731
          Length = 328

 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 47/71 (66%), Gaps = 4/71 (5%)

Query: 125 PALAVRNLMEQARFAHLCTVMSRMHHRREGYPFGSLVDFAPDSMGHPVFSFSPLAIHTRN 184
           P   +R +++++    L   +S    + +GYP GS+VDFA D+ G P+ + S LA+H+++
Sbjct: 88  PVEEIRTVLDRS----LRGTLSTFSKKYDGYPSGSMVDFACDANGCPILAVSDLAVHSKD 143

Query: 185 LLANPRCTLVV 195
           L ANP+C++++
Sbjct: 144 LAANPKCSVLL 154


>Medtr7g085670.2 | root border cell-specific protein, putative | HC
           | chr7:33213022-33215504 | 20130731
          Length = 236

 Score = 58.2 bits (139), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 47/71 (66%), Gaps = 4/71 (5%)

Query: 125 PALAVRNLMEQARFAHLCTVMSRMHHRREGYPFGSLVDFAPDSMGHPVFSFSPLAIHTRN 184
           P   +R +++++    L   +S    + +GYP GS+VDFA D+ G P+ + S LA+H+++
Sbjct: 88  PVEEIRTVLDRS----LRGTLSTFSKKYDGYPSGSMVDFACDANGCPILAVSDLAVHSKD 143

Query: 185 LLANPRCTLVV 195
           L ANP+C++++
Sbjct: 144 LAANPKCSVLL 154