Miyakogusa Predicted Gene
- Lj3g3v2057510.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2057510.1 Non Characterized Hit- tr|I1KVQ8|I1KVQ8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.14008
PE,79.67,0,Glucocorticoid receptor-like (DNA-binding domain),NULL; no
description,Tify; zinc finger binding to ,CUFF.43528.1
(306 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g100050.1 | GATA transcription factor | HC | chr3:45934504... 222 4e-58
Medtr5g066510.1 | GATA transcription factor | HC | chr5:28062542... 208 5e-54
Medtr3g100040.1 | GATA transcription factor | HC | chr3:45925626... 194 7e-50
Medtr4g093730.1 | GATA transcription factor | HC | chr4:37055500... 194 1e-49
Medtr3g100040.2 | GATA transcription factor | HC | chr3:45923987... 153 2e-37
Medtr5g066510.2 | GATA transcription factor | HC | chr5:28062546... 133 2e-31
Medtr4g008090.1 | GATA transcription factor, putative | LC | chr... 130 2e-30
Medtr4g008070.1 | GATA type zinc finger transcription factor fam... 129 5e-30
Medtr3g060200.1 | GATA type zinc finger transcription factor fam... 70 2e-12
Medtr3g060200.2 | GATA type zinc finger transcription factor fam... 70 2e-12
Medtr3g060200.4 | GATA type zinc finger transcription factor fam... 70 2e-12
Medtr3g060200.6 | GATA type zinc finger transcription factor fam... 70 3e-12
Medtr3g060200.3 | GATA type zinc finger transcription factor fam... 70 3e-12
Medtr3g060200.5 | GATA type zinc finger transcription factor fam... 70 3e-12
Medtr3g037390.2 | timing of cab expression 1/PRR response regula... 56 5e-08
Medtr3g037390.1 | timing of cab expression 1/PRR response regula... 55 6e-08
Medtr4g108880.2 | two-component response regulator-like APRR7 pr... 52 5e-07
Medtr4g108880.1 | two-component response regulator-like APRR7 pr... 52 5e-07
Medtr8g024260.1 | PRR response regulator | LC | chr8:8900931-889... 50 3e-06
>Medtr3g100050.1 | GATA transcription factor | HC |
chr3:45934504-45928756 | 20130731
Length = 309
Score = 222 bits (565), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 116/196 (59%), Positives = 134/196 (68%), Gaps = 9/196 (4%)
Query: 74 NHTVMVDQASDGGDQLTLSFQGQVYVFDSVSPDKVQAVLLLLGGREIPPTGPAMPVSPHQ 133
NH M Q D QLTLSF+GQVYVFDSV+P+KVQ+VLLLLGG E+ P + SP
Sbjct: 57 NHPDMSVQQFDDSSQLTLSFRGQVYVFDSVTPEKVQSVLLLLGGCELNPGSQCLDTSPL- 115
Query: 134 NNRGFSGTPPKFSVPQRIASLIRFHEKRKERNFEKKIRYTVRKEVALRMQRNKGQFTSTK 193
N R + P + S PQR ASLIRF +KRKERNF+KK+RY VR+EVALRMQR+KGQFTS K
Sbjct: 116 NQRSGAEFPTRCSQPQRAASLIRFRQKRKERNFDKKVRYEVRQEVALRMQRSKGQFTSAK 175
Query: 194 SNHDESTSNATNWGTNENWTGDNNGSQQQDIVCRHCGTSEKCTPMMRRGPEGPRTLCNAC 253
+WG++ D Q + C HCG S K TPMMRRGP GPRTLCNAC
Sbjct: 176 KQ-----DGGNSWGSDPESGQD---VVQSETSCTHCGISSKSTPMMRRGPSGPRTLCNAC 227
Query: 254 GLMWANKGTLRDLSRA 269
GL WAN+GTLRDLS A
Sbjct: 228 GLFWANRGTLRDLSTA 243
>Medtr5g066510.1 | GATA transcription factor | HC |
chr5:28062542-28067446 | 20130731
Length = 286
Score = 208 bits (530), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 116/202 (57%), Positives = 142/202 (70%), Gaps = 12/202 (5%)
Query: 68 HGNIHDNHTVMVDQASDGGDQLTLSFQGQVYVFDSVSPDKVQAVLLLLGGREIPPTGPAM 127
+GN +N + Q+ D DQLTLSF+GQVYVFDSV+P KVQ+VLLLLGG E P G +
Sbjct: 55 YGNGSENPEFAL-QSFDESDQLTLSFRGQVYVFDSVTPAKVQSVLLLLGGCEQPNVG--V 111
Query: 128 PVSPHQNNRGFS-GTPPKFSVPQRIASLIRFHEKRKERNFEKKIRYTVRKEVALRMQRNK 186
P Q+ R S P K+S R ASL+RF +KRKER F+KK+RY VR+EVALRMQR K
Sbjct: 112 NAVPQQSLRVESMDFPTKYSQLHREASLLRFRQKRKERCFDKKVRYEVRQEVALRMQRKK 171
Query: 187 GQFTSTKSNHDESTSNATNWGTNENWTGDNNGSQQQDIVCRHCGTSEKCTPMMRRGPEGP 246
GQFT++K D S S GT+++ + D + S+ I C HCGTS K TPMMRRGP GP
Sbjct: 172 GQFTTSK-KQDGSNS----CGTDQDSSQDASPSE---ISCTHCGTSSKSTPMMRRGPSGP 223
Query: 247 RTLCNACGLMWANKGTLRDLSR 268
R+LCNACGL WAN+G LRDLS+
Sbjct: 224 RSLCNACGLFWANRGVLRDLSK 245
>Medtr3g100040.1 | GATA transcription factor | HC |
chr3:45925626-45916495 | 20130731
Length = 359
Score = 194 bits (494), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 99/183 (54%), Positives = 122/183 (66%), Gaps = 5/183 (2%)
Query: 88 QLTLSFQGQVYVFDSVSPDKVQAVLLLLGGREIPPTGPAMPVSPHQNNRGFSGTPPKFSV 147
+LTLSF+G+VYVF V+ KVQAVLL LGG P P + QNNRG G ++
Sbjct: 69 ELTLSFEGEVYVFPDVTHQKVQAVLLFLGGSGAQPGMPTAELPFDQNNRGMGGIGKLPNL 128
Query: 148 PQRIASLIRFHEKRKERNFEKKIRYTVRKEVALRMQRNKGQFTSTKSNHDESTSNATNWG 207
+RIASL+R+ EKRKER F+KKIRYTVRKEVA RM R KGQF K + +++W
Sbjct: 129 SRRIASLVRYREKRKERCFDKKIRYTVRKEVAERMHREKGQFAPLK-----QSPGSSSWN 183
Query: 208 TNENWTGDNNGSQQQDIVCRHCGTSEKCTPMMRRGPEGPRTLCNACGLMWANKGTLRDLS 267
+ + D + + + C+HCG +E TP MRRGP GPRTLCNACGLMWANKGTLRDLS
Sbjct: 184 SAQGAGQDGSPNPESLRRCQHCGVNENNTPAMRRGPAGPRTLCNACGLMWANKGTLRDLS 243
Query: 268 RAA 270
+
Sbjct: 244 KGG 246
>Medtr4g093730.1 | GATA transcription factor | HC |
chr4:37055500-37051502 | 20130731
Length = 334
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 103/190 (54%), Positives = 127/190 (66%), Gaps = 10/190 (5%)
Query: 86 GDQLTLSFQGQVYVFDSVSPDKVQAVLLLLGGREIPPTGPAMPVSPHQNNRGFSGTPPKF 145
+LT+SF+G+VYVF SV+P+KVQAVLLLL G+E + P QN R G F
Sbjct: 41 ASELTISFEGEVYVFPSVTPEKVQAVLLLLDGKETRNSVPTSDFPVQQNCRDIWGKNDPF 100
Query: 146 ---SVPQRIASLIRFHEKRKERNFEKKIRYTVRKEVALRMQRNKGQFTSTKSNHDESTSN 202
V +R ASL+RF EKRKER FEKKIRYT RKEVA RMQR GQF S K +E +S
Sbjct: 101 RNSKVSRRSASLVRFREKRKERCFEKKIRYTCRKEVAERMQRKNGQFASLK---EECSSP 157
Query: 203 ATNWGTNENWTGDNNGSQQQDIVCRHCGTSEKCTPMMRRGPEGPRTLCNACGLMWANKGT 262
A N ++++ + + + C+HCG + K TP+MRRGP GPRTLCNACGLMWANKGT
Sbjct: 158 AEN----QDFSNGSPFPESIERRCQHCGIAAKSTPVMRRGPAGPRTLCNACGLMWANKGT 213
Query: 263 LRDLSRAAAL 272
LRDL +A +
Sbjct: 214 LRDLGKAGRI 223
>Medtr3g100040.2 | GATA transcription factor | HC |
chr3:45923987-45916495 | 20130731
Length = 255
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/138 (55%), Positives = 94/138 (68%), Gaps = 5/138 (3%)
Query: 133 QNNRGFSGTPPKFSVPQRIASLIRFHEKRKERNFEKKIRYTVRKEVALRMQRNKGQFTST 192
QNNRG G ++ +RIASL+R+ EKRKER F+KKIRYTVRKEVA RM R KGQF
Sbjct: 10 QNNRGMGGIGKLPNLSRRIASLVRYREKRKERCFDKKIRYTVRKEVAERMHREKGQFAPL 69
Query: 193 KSNHDESTSNATNWGTNENWTGDNNGSQQQDIVCRHCGTSEKCTPMMRRGPEGPRTLCNA 252
K + +++W + + D + + + C+HCG +E TP MRRGP GPRTLCNA
Sbjct: 70 KQ-----SPGSSSWNSAQGAGQDGSPNPESLRRCQHCGVNENNTPAMRRGPAGPRTLCNA 124
Query: 253 CGLMWANKGTLRDLSRAA 270
CGLMWANKGTLRDLS+
Sbjct: 125 CGLMWANKGTLRDLSKGG 142
>Medtr5g066510.2 | GATA transcription factor | HC |
chr5:28062546-28067424 | 20130731
Length = 202
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/147 (53%), Positives = 101/147 (68%), Gaps = 5/147 (3%)
Query: 68 HGNIHDNHTVMVDQASDGGDQLTLSFQGQVYVFDSVSPDKVQAVLLLLGGREIPPTGPAM 127
+GN +N + Q+ D DQLTLSF+GQVYVFDSV+P KVQ+VLLLLGG E P G +
Sbjct: 55 YGNGSENPEFAL-QSFDESDQLTLSFRGQVYVFDSVTPAKVQSVLLLLGGCEQPNVG--V 111
Query: 128 PVSPHQNNRGFS-GTPPKFSVPQRIASLIRFHEKRKERNFEKKIRYTVRKEVALRMQRNK 186
P Q+ R S P K+S R ASL+RF +KRKER F+KK+RY VR+EVALRMQR K
Sbjct: 112 NAVPQQSLRVESMDFPTKYSQLHREASLLRFRQKRKERCFDKKVRYEVRQEVALRMQRKK 171
Query: 187 GQFTSTKSNHDESTSNATNWGTNENWT 213
GQFT++K D S S T+ ++++ +
Sbjct: 172 GQFTTSK-KQDGSNSCGTDQDSSQDAS 197
>Medtr4g008090.1 | GATA transcription factor, putative | LC |
chr4:1386387-1385369 | 20130731
Length = 121
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 62/76 (81%), Positives = 71/76 (93%), Gaps = 1/76 (1%)
Query: 107 KVQAVLLLLGGREIPPTGPAMPVSPHQNNRGFSGTPPKFSVPQRIASLIRFHEKRKERNF 166
+VQ+VLLLLGGRE+PPT P+MP+SP +NN+GF GTP KFSVPQR+ASLIRFHEKRKERNF
Sbjct: 12 QVQSVLLLLGGREVPPTLPSMPISPDENNQGFIGTPEKFSVPQRLASLIRFHEKRKERNF 71
Query: 167 EKKIRYTVRKE-VALR 181
+KKIRYTVRKE VALR
Sbjct: 72 DKKIRYTVRKEVVALR 87
>Medtr4g008070.1 | GATA type zinc finger transcription factor family
protein | HC | chr4:1374851-1372511 | 20130731
Length = 96
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 60/79 (75%), Positives = 64/79 (81%)
Query: 182 MQRNKGQFTSTKSNHDESTSNATNWGTNENWTGDNNGSQQQDIVCRHCGTSEKCTPMMRR 241
MQRNKG+FTS KS +DES S N GT+E DN+GSQQQD VCR C SEKCTPMMRR
Sbjct: 1 MQRNKGRFTSAKSKNDESASAEMNCGTSEGLMADNDGSQQQDYVCRQCNISEKCTPMMRR 60
Query: 242 GPEGPRTLCNACGLMWANK 260
GPEGPRTLCNACGLMWANK
Sbjct: 61 GPEGPRTLCNACGLMWANK 79
>Medtr3g060200.1 | GATA type zinc finger transcription factor family
protein | LC | chr3:23608071-23617948 | 20130731
Length = 529
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 62/108 (57%), Gaps = 6/108 (5%)
Query: 174 VRKEVALRMQRNKGQFTSTKSNHDESTSNATNWGTNENWTGDNNGSQQQDIVCRHCGTSE 233
+R++ ++ Q+N+ QF S K D S ++T + + N S ++ C+HC +E
Sbjct: 4 IRRDTSMMRQKNR-QFKSLKQIPDFSKCDSTLSAGRD--SSRNPTSLRR---CQHCVDNE 57
Query: 234 KCTPMMRRGPEGPRTLCNACGLMWANKGTLRDLSRAAALMPGPNSSLN 281
TP+MR GP G +TLCNACG++WA K LRDLS+ + S L+
Sbjct: 58 NNTPLMRHGPAGEKTLCNACGIVWAKKRKLRDLSKGRVDLSVEQSDLD 105
>Medtr3g060200.2 | GATA type zinc finger transcription factor family
protein | LC | chr3:23607714-23617962 | 20130731
Length = 529
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 62/108 (57%), Gaps = 6/108 (5%)
Query: 174 VRKEVALRMQRNKGQFTSTKSNHDESTSNATNWGTNENWTGDNNGSQQQDIVCRHCGTSE 233
+R++ ++ Q+N+ QF S K D S ++T + + N S ++ C+HC +E
Sbjct: 4 IRRDTSMMRQKNR-QFKSLKQIPDFSKCDSTLSAGRD--SSRNPTSLRR---CQHCVDNE 57
Query: 234 KCTPMMRRGPEGPRTLCNACGLMWANKGTLRDLSRAAALMPGPNSSLN 281
TP+MR GP G +TLCNACG++WA K LRDLS+ + S L+
Sbjct: 58 NNTPLMRHGPAGEKTLCNACGIVWAKKRKLRDLSKGRVDLSVEQSDLD 105
>Medtr3g060200.4 | GATA type zinc finger transcription factor family
protein | LC | chr3:23608071-23615956 | 20130731
Length = 391
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 62/108 (57%), Gaps = 6/108 (5%)
Query: 174 VRKEVALRMQRNKGQFTSTKSNHDESTSNATNWGTNENWTGDNNGSQQQDIVCRHCGTSE 233
+R++ ++ Q+N+ QF S K D S ++T + + N S ++ C+HC +E
Sbjct: 4 IRRDTSMMRQKNR-QFKSLKQIPDFSKCDSTLSAGRD--SSRNPTSLRR---CQHCVDNE 57
Query: 234 KCTPMMRRGPEGPRTLCNACGLMWANKGTLRDLSRAAALMPGPNSSLN 281
TP+MR GP G +TLCNACG++WA K LRDLS+ + S L+
Sbjct: 58 NNTPLMRHGPAGEKTLCNACGIVWAKKRKLRDLSKGRVDLSVEQSDLD 105
>Medtr3g060200.6 | GATA type zinc finger transcription factor family
protein | LC | chr3:23607725-23617948 | 20130731
Length = 410
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 58/95 (61%), Gaps = 6/95 (6%)
Query: 174 VRKEVALRMQRNKGQFTSTKSNHDESTSNATNWGTNENWTGDNNGSQQQDIVCRHCGTSE 233
+R++ ++ Q+N+ QF S K D S ++T + + N S ++ C+HC +E
Sbjct: 4 IRRDTSMMRQKNR-QFKSLKQIPDFSKCDSTLSAGRD--SSRNPTSLRR---CQHCVDNE 57
Query: 234 KCTPMMRRGPEGPRTLCNACGLMWANKGTLRDLSR 268
TP+MR GP G +TLCNACG++WA K LRDLS+
Sbjct: 58 NNTPLMRHGPAGEKTLCNACGIVWAKKRKLRDLSK 92
>Medtr3g060200.3 | GATA type zinc finger transcription factor family
protein | LC | chr3:23608065-23617962 | 20130731
Length = 410
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 58/95 (61%), Gaps = 6/95 (6%)
Query: 174 VRKEVALRMQRNKGQFTSTKSNHDESTSNATNWGTNENWTGDNNGSQQQDIVCRHCGTSE 233
+R++ ++ Q+N+ QF S K D S ++T + + N S ++ C+HC +E
Sbjct: 4 IRRDTSMMRQKNR-QFKSLKQIPDFSKCDSTLSAGRD--SSRNPTSLRR---CQHCVDNE 57
Query: 234 KCTPMMRRGPEGPRTLCNACGLMWANKGTLRDLSR 268
TP+MR GP G +TLCNACG++WA K LRDLS+
Sbjct: 58 NNTPLMRHGPAGEKTLCNACGIVWAKKRKLRDLSK 92
>Medtr3g060200.5 | GATA type zinc finger transcription factor family
protein | LC | chr3:23607696-23617962 | 20130731
Length = 320
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 62/108 (57%), Gaps = 6/108 (5%)
Query: 174 VRKEVALRMQRNKGQFTSTKSNHDESTSNATNWGTNENWTGDNNGSQQQDIVCRHCGTSE 233
+R++ ++ Q+N+ QF S K D S ++T + + N S ++ C+HC +E
Sbjct: 4 IRRDTSMMRQKNR-QFKSLKQIPDFSKCDSTLSAGRD--SSRNPTSLRR---CQHCVDNE 57
Query: 234 KCTPMMRRGPEGPRTLCNACGLMWANKGTLRDLSRAAALMPGPNSSLN 281
TP+MR GP G +TLCNACG++WA K LRDLS+ + S L+
Sbjct: 58 NNTPLMRHGPAGEKTLCNACGIVWAKKRKLRDLSKGRVDLSVEQSDLD 105
>Medtr3g037390.2 | timing of cab expression 1/PRR response regulator
| HC | chr3:13734998-13728441 | 20130731
Length = 471
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 137 GFSGTPPKFS-VPQRIASLIRFHEKRKERNFEKKIRYTVRKEVALRMQRNKGQFTS 191
G S + K S V +R A+LI+F +K+KER F+KKIRY RK++A R R +GQF S
Sbjct: 380 GSSSSEAKLSKVDRREAALIKFRQKKKERCFDKKIRYVNRKQLAERRPRVRGQFVS 435
>Medtr3g037390.1 | timing of cab expression 1/PRR response regulator
| HC | chr3:13734998-13728441 | 20130731
Length = 575
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 137 GFSGTPPKFS-VPQRIASLIRFHEKRKERNFEKKIRYTVRKEVALRMQRNKGQFTS 191
G S + K S V +R A+LI+F +K+KER F+KKIRY RK++A R R +GQF S
Sbjct: 484 GSSSSEAKLSKVDRREAALIKFRQKKKERCFDKKIRYVNRKQLAERRPRVRGQFVS 539
>Medtr4g108880.2 | two-component response regulator-like APRR7
protein | HC | chr4:45127441-45132438 | 20130731
Length = 585
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 33/44 (75%)
Query: 147 VPQRIASLIRFHEKRKERNFEKKIRYTVRKEVALRMQRNKGQFT 190
V +R A+L++F +KRKER F+KKIRY RK++A R R +GQF
Sbjct: 502 VDRREAALMKFRQKRKERCFDKKIRYVNRKQLAERRPRVRGQFV 545
>Medtr4g108880.1 | two-component response regulator-like APRR7
protein | HC | chr4:45127441-45132453 | 20130731
Length = 585
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 33/44 (75%)
Query: 147 VPQRIASLIRFHEKRKERNFEKKIRYTVRKEVALRMQRNKGQFT 190
V +R A+L++F +KRKER F+KKIRY RK++A R R +GQF
Sbjct: 502 VDRREAALMKFRQKRKERCFDKKIRYVNRKQLAERRPRVRGQFV 545
>Medtr8g024260.1 | PRR response regulator | LC |
chr8:8900931-8895233 | 20130731
Length = 640
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 31/49 (63%)
Query: 149 QRIASLIRFHEKRKERNFEKKIRYTVRKEVALRMQRNKGQFTSTKSNHD 197
QR A+L +F KRKER FEKK+RY RK+ A + R KGQF N D
Sbjct: 583 QREAALTKFRLKRKERCFEKKVRYQSRKKQAEQRLRVKGQFVRKVQNDD 631