Miyakogusa Predicted Gene

Lj3g3v2055450.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2055450.1 Non Characterized Hit- tr|I3T3P4|I3T3P4_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.5,0,RIBOSOMAL_L30,Ribosomal protein L30, conserved site;
Ribosomal_L30_N,Ribosomal protein L30, N-termin,CUFF.43694.1
         (200 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g008160.1 | thaliana 60S ribosomal protein L7 | HC | chr4:...   301   2e-82
Medtr1g022385.1 | thaliana 60S ribosomal protein L7 | HC | chr1:...   301   3e-82
Medtr2g038250.1 | thaliana 60S ribosomal protein L7 | HC | chr2:...   296   8e-81
Medtr7g059170.2 | thaliana 60S ribosomal protein L7 | HC | chr7:...   160   1e-39
Medtr7g059170.3 | thaliana 60S ribosomal protein L7 | HC | chr7:...   160   1e-39
Medtr7g059170.1 | thaliana 60S ribosomal protein L7 | HC | chr7:...   160   1e-39
Medtr1g022375.1 | 60S ribosomal protein L7, putative | LC | chr1...    59   3e-09

>Medtr4g008160.1 | thaliana 60S ribosomal protein L7 | HC |
           chr4:1428326-1425811 | 20130731
          Length = 243

 Score =  301 bits (772), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 147/200 (73%), Positives = 165/200 (82%)

Query: 1   MGEEVKAFVPESVLKKRKREEEWXXXXXXXXXXXXXXXXXSRKLIYSRAKQYAKEYDEQE 60
           MGEEVK+ VPESVLKK+ REE+W                 +RKLIYSRAKQY++EY+++E
Sbjct: 1   MGEEVKSIVPESVLKKQNREEQWALAKTQESEASKKKRAENRKLIYSRAKQYSQEYEDKE 60

Query: 61  KELIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAMHPKTRKXXXXXXXXXXFNGVFLKV 120
           +ELI LKREAKLKGGFYVDPEAKLLFIIRIRGINAM PKTRK          FNGVFLKV
Sbjct: 61  RELISLKREAKLKGGFYVDPEAKLLFIIRIRGINAMDPKTRKILQLFRLRQIFNGVFLKV 120

Query: 121 NKATVNMLHRVEPYVTFGYPNLKSVRELIYKRGYGKLNKQRTALTDNSIVEQALGKFGII 180
           NKAT+NMLHRVEPYVT+GYPNLKSVRELIYKRGYGKL++QRT LTDNSI+EQ LGK GI+
Sbjct: 121 NKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLDRQRTPLTDNSIIEQGLGKHGIL 180

Query: 181 SVEDLIHEIMTVGPHFKEAN 200
            +EDLIHEI+TVGPHFKEAN
Sbjct: 181 CIEDLIHEILTVGPHFKEAN 200


>Medtr1g022385.1 | thaliana 60S ribosomal protein L7 | HC |
           chr1:7108698-7105236 | 20130731
          Length = 275

 Score =  301 bits (771), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 148/198 (74%), Positives = 162/198 (81%)

Query: 3   EEVKAFVPESVLKKRKREEEWXXXXXXXXXXXXXXXXXSRKLIYSRAKQYAKEYDEQEKE 62
           EEVK  VPESVLKK+KR EEW                 +RKLI+SRAKQYAKEYD+Q+KE
Sbjct: 35  EEVKTVVPESVLKKQKRNEEWALVKKQEQESAKKKRAQTRKLIWSRAKQYAKEYDDQQKE 94

Query: 63  LIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAMHPKTRKXXXXXXXXXXFNGVFLKVNK 122
           LI LKREAKLKGGFYVDPEAKLLFIIRIRGINAM PK+RK          FNGVFLKVNK
Sbjct: 95  LISLKREAKLKGGFYVDPEAKLLFIIRIRGINAMDPKSRKILQLLRLRQIFNGVFLKVNK 154

Query: 123 ATVNMLHRVEPYVTFGYPNLKSVRELIYKRGYGKLNKQRTALTDNSIVEQALGKFGIISV 182
           ATVNMLHRVEPYVT+GYPNLKSVRELIYKRGYGK+++QR ALTDNSI+EQ LGK GII +
Sbjct: 155 ATVNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKVDRQRIALTDNSIIEQVLGKHGIICI 214

Query: 183 EDLIHEIMTVGPHFKEAN 200
           EDLIHEI+TVGPHF+EAN
Sbjct: 215 EDLIHEILTVGPHFREAN 232


>Medtr2g038250.1 | thaliana 60S ribosomal protein L7 | HC |
           chr2:16653396-16650568 | 20130731
          Length = 244

 Score =  296 bits (758), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 146/198 (73%), Positives = 160/198 (80%)

Query: 3   EEVKAFVPESVLKKRKREEEWXXXXXXXXXXXXXXXXXSRKLIYSRAKQYAKEYDEQEKE 62
           EEVK  VPESVLKK+KR EEW                 +RKLI+SRAKQYAKEYD+ +KE
Sbjct: 4   EEVKTVVPESVLKKQKRNEEWALVKKQEQESAKKKRSETRKLIWSRAKQYAKEYDDSQKE 63

Query: 63  LIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAMHPKTRKXXXXXXXXXXFNGVFLKVNK 122
           LI LKREAKLKGGFYVDPEAKLLFIIRIRGINAM PK+RK           NGVFLKVNK
Sbjct: 64  LIALKREAKLKGGFYVDPEAKLLFIIRIRGINAMDPKSRKILQLLRLRQICNGVFLKVNK 123

Query: 123 ATVNMLHRVEPYVTFGYPNLKSVRELIYKRGYGKLNKQRTALTDNSIVEQALGKFGIISV 182
           ATVNMLHRVEPYVT+GYPNLKSVRELIYKRGYGK+++QR ALTDNSI+EQ LGK GII +
Sbjct: 124 ATVNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKVDRQRIALTDNSIIEQVLGKHGIICI 183

Query: 183 EDLIHEIMTVGPHFKEAN 200
           EDLIHEI+TVGPHF+EAN
Sbjct: 184 EDLIHEILTVGPHFREAN 201


>Medtr7g059170.2 | thaliana 60S ribosomal protein L7 | HC |
           chr7:21344567-21342776 | 20130731
          Length = 246

 Score =  160 bits (404), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 79/192 (41%), Positives = 115/192 (59%), Gaps = 1/192 (0%)

Query: 8   FVPESVLKKRKREEEWXXXXXXXXXXXXXXXXXSRKLIYSRAKQYAKEYDEQEKELIRLK 67
           ++PE +LKKRK  E W                 S+  I  + + +  EY  +E +LIR+K
Sbjct: 12  YIPEVILKKRKHSEAWALSKKAQLQKKSFQLRKSKDFI-KKPEDFIFEYRNREIDLIRMK 70

Query: 68  REAKLKGGFYVDPEAKLLFIIRIRGINAMHPKTRKXXXXXXXXXXFNGVFLKVNKATVNM 127
           R  K + G    P  K + +IRI+G   MH  TRK          F+ VF+K     +  
Sbjct: 71  RRVKWRRGDKSKPSNKPIIVIRIQGKQDMHATTRKHLFSLGLRRIFSAVFVKPTDGVMAK 130

Query: 128 LHRVEPYVTFGYPNLKSVRELIYKRGYGKLNKQRTALTDNSIVEQALGKFGIISVEDLIH 187
           L RVEPYVT+GY NLK+++ELIYK+G+ K++K++  LTDN+++EQ LGKFG++ +ED++H
Sbjct: 131 LARVEPYVTYGYANLKTIKELIYKKGHAKIDKRKVPLTDNNLIEQELGKFGVVCIEDIVH 190

Query: 188 EIMTVGPHFKEA 199
           +I  VGPHFKE 
Sbjct: 191 QIDNVGPHFKEV 202


>Medtr7g059170.3 | thaliana 60S ribosomal protein L7 | HC |
           chr7:21344567-21342776 | 20130731
          Length = 246

 Score =  160 bits (404), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 79/192 (41%), Positives = 115/192 (59%), Gaps = 1/192 (0%)

Query: 8   FVPESVLKKRKREEEWXXXXXXXXXXXXXXXXXSRKLIYSRAKQYAKEYDEQEKELIRLK 67
           ++PE +LKKRK  E W                 S+  I  + + +  EY  +E +LIR+K
Sbjct: 12  YIPEVILKKRKHSEAWALSKKAQLQKKSFQLRKSKDFI-KKPEDFIFEYRNREIDLIRMK 70

Query: 68  REAKLKGGFYVDPEAKLLFIIRIRGINAMHPKTRKXXXXXXXXXXFNGVFLKVNKATVNM 127
           R  K + G    P  K + +IRI+G   MH  TRK          F+ VF+K     +  
Sbjct: 71  RRVKWRRGDKSKPSNKPIIVIRIQGKQDMHATTRKHLFSLGLRRIFSAVFVKPTDGVMAK 130

Query: 128 LHRVEPYVTFGYPNLKSVRELIYKRGYGKLNKQRTALTDNSIVEQALGKFGIISVEDLIH 187
           L RVEPYVT+GY NLK+++ELIYK+G+ K++K++  LTDN+++EQ LGKFG++ +ED++H
Sbjct: 131 LARVEPYVTYGYANLKTIKELIYKKGHAKIDKRKVPLTDNNLIEQELGKFGVVCIEDIVH 190

Query: 188 EIMTVGPHFKEA 199
           +I  VGPHFKE 
Sbjct: 191 QIDNVGPHFKEV 202


>Medtr7g059170.1 | thaliana 60S ribosomal protein L7 | HC |
           chr7:21344567-21342776 | 20130731
          Length = 246

 Score =  160 bits (404), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 79/192 (41%), Positives = 115/192 (59%), Gaps = 1/192 (0%)

Query: 8   FVPESVLKKRKREEEWXXXXXXXXXXXXXXXXXSRKLIYSRAKQYAKEYDEQEKELIRLK 67
           ++PE +LKKRK  E W                 S+  I  + + +  EY  +E +LIR+K
Sbjct: 12  YIPEVILKKRKHSEAWALSKKAQLQKKSFQLRKSKDFI-KKPEDFIFEYRNREIDLIRMK 70

Query: 68  REAKLKGGFYVDPEAKLLFIIRIRGINAMHPKTRKXXXXXXXXXXFNGVFLKVNKATVNM 127
           R  K + G    P  K + +IRI+G   MH  TRK          F+ VF+K     +  
Sbjct: 71  RRVKWRRGDKSKPSNKPIIVIRIQGKQDMHATTRKHLFSLGLRRIFSAVFVKPTDGVMAK 130

Query: 128 LHRVEPYVTFGYPNLKSVRELIYKRGYGKLNKQRTALTDNSIVEQALGKFGIISVEDLIH 187
           L RVEPYVT+GY NLK+++ELIYK+G+ K++K++  LTDN+++EQ LGKFG++ +ED++H
Sbjct: 131 LARVEPYVTYGYANLKTIKELIYKKGHAKIDKRKVPLTDNNLIEQELGKFGVVCIEDIVH 190

Query: 188 EIMTVGPHFKEA 199
           +I  VGPHFKE 
Sbjct: 191 QIDNVGPHFKEV 202


>Medtr1g022375.1 | 60S ribosomal protein L7, putative | LC |
           chr1:7096779-7095436 | 20130731
          Length = 156

 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 28/69 (40%), Positives = 42/69 (60%)

Query: 132 EPYVTFGYPNLKSVRELIYKRGYGKLNKQRTALTDNSIVEQALGKFGIISVEDLIHEIMT 191
           +P V     N+   + +   + YG  +  R + +  + ++  LGK GII +EDLIHEI+T
Sbjct: 55  DPNVESHKGNIGYSQNIDLCQPYGPDDHYRVSTSIGAGIDMVLGKHGIICIEDLIHEILT 114

Query: 192 VGPHFKEAN 200
           VGPHF+EAN
Sbjct: 115 VGPHFREAN 123