Miyakogusa Predicted Gene

Lj3g3v2039980.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2039980.1 Non Characterized Hit- tr|I1KV87|I1KV87_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.49454
PE,58.46,0.000000000002,seg,NULL,CUFF.43481.1
         (66 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g102180.1 | heat shock 70 kDa protein | HC | chr2:43968846...    50   4e-07

>Medtr2g102180.1 | heat shock 70 kDa protein | HC |
           chr2:43968846-43975620 | 20130731
          Length = 858

 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 23/33 (69%), Positives = 26/33 (78%)

Query: 33  NANTRENVGDNGNQAPPASSEPMETDKLENSGS 65
           NA + +N GDNGNQ PP S EPMETDK EN+GS
Sbjct: 825 NAGSNDNAGDNGNQVPPVSGEPMETDKSENTGS 857