Miyakogusa Predicted Gene
- Lj3g3v2027310.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2027310.1 tr|Q944M2|Q944M2_ARATH AT4g14500/dl3290w
OS=Arabidopsis thaliana GN=At4g14500 PE=2 SV=1,32.18,5e-19,seg,NULL;
Bet v1-like,NULL; SUBFAMILY NOT NAMED,NULL; PHOSPHATIDYLCHOLINE
TRANSFER PROTEIN,NULL; no
,NODE_55881_length_1221_cov_54.047501.path1.1
(250 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g005140.1 | homeobox/lipid-binding domain protein | HC | c... 386 e-108
Medtr3g092640.1 | membrane-related protein CP5, putative | HC | ... 101 6e-22
Medtr5g007030.2 | mammalian STARD2 lipid-binding START domain pr... 97 2e-20
Medtr5g007030.1 | mammalian STARD2 lipid-binding START domain pr... 96 2e-20
Medtr1g078030.1 | mammalian STARD2 lipid-binding START domain pr... 91 8e-19
>Medtr4g005140.1 | homeobox/lipid-binding domain protein | HC |
chr4:85012-80984 | 20130731
Length = 381
Score = 386 bits (992), Expect = e-108, Method: Compositional matrix adjust.
Identities = 190/250 (76%), Positives = 204/250 (81%), Gaps = 2/250 (0%)
Query: 1 MLRNFYMDNDYRKQWDKTVVEHNQLQVDESDGTEVGRTVKKFPLLKPREYVLTWKLWEGR 60
MLRNFYMDNDYRKQWDKTVVEHNQLQVD+SDG+EVGRTVKKFPLLKPREYVLTWKLWEGR
Sbjct: 134 MLRNFYMDNDYRKQWDKTVVEHNQLQVDKSDGSEVGRTVKKFPLLKPREYVLTWKLWEGR 193
Query: 61 DNFFYCYMKECEHPLAPRLRKYVRVEFYRSGWRIRQIPGQNACEITMFHQEVAGLNMEMA 120
D FYCY+KECEH LAPR KYVRVEF+RSGWRIRQ+PG+NACEITMFHQE AGLN+EMA
Sbjct: 194 DKTFYCYIKECEHTLAPRQNKYVRVEFFRSGWRIRQVPGRNACEITMFHQEDAGLNVEMA 253
Query: 121 KLAFSKGIWSYVCKMDNALRSYSAISGQLXXXXXXXXNLLQKVPAWLDSSTRNISPAHRT 180
KLAFSKGIWSYVCKMDNALR YSA SG L NL+QKVPA L+SST S +H T
Sbjct: 254 KLAFSKGIWSYVCKMDNALRRYSAASGHLSSSVTSSVNLMQKVPACLESSTSYASSSHPT 313
Query: 181 TIHDHVTNESEARVISRRPSRKXXXXXXXXXXXXVCLSRGHSSLGAKVAMAYILTKLSKH 240
IHD T+ES+ RVISRRPSRK +CLSRGHSSLGAKVAMAYI +KL K
Sbjct: 314 IIHDQTTHESQVRVISRRPSRKFLANSVLLVGGAICLSRGHSSLGAKVAMAYIFSKLRK- 372
Query: 241 GAASNQRKQS 250
SNQ KQS
Sbjct: 373 -TNSNQTKQS 381
>Medtr3g092640.1 | membrane-related protein CP5, putative | HC |
chr3:42338841-42335197 | 20130731
Length = 424
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 84/150 (56%), Gaps = 10/150 (6%)
Query: 1 MLRNFYMDNDYRKQWDKTVVEHNQLQVDESDGTEVGRTVKKFPLL-KPREYVLTWKLWE- 58
M+R+ + D+ +R +WD +V L+ + GT + ++KFP K REY++ ++WE
Sbjct: 180 MVRDLFWDDQFRPKWDDMLVNSTTLEECPTTGTMKVQWIRKFPFFCKDREYIIGRRIWEC 239
Query: 59 GRDNFFYCYMKECEHPLAPRLRKYVRVEFYRSGWRIRQIP-----GQ-NACEITMFHQEV 112
GR +YC K + P PR K RV+ Y S W IR + GQ ACEI +FH E
Sbjct: 240 GRS--YYCITKGVDCPSIPRQEKPRRVDVYYSSWCIRAVESKRDNGQLTACEILLFHHEE 297
Query: 113 AGLNMEMAKLAFSKGIWSYVCKMDNALRSY 142
G+ E+AKL KG+W V K++ LR+Y
Sbjct: 298 MGIPWEIAKLGVRKGMWGMVQKIEPGLRAY 327
>Medtr5g007030.2 | mammalian STARD2 lipid-binding START domain
protein | HC | chr5:1173861-1179345 | 20130731
Length = 326
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 83/149 (55%), Gaps = 8/149 (5%)
Query: 1 MLRNFYMDNDYRKQWDKTVVEHNQLQVDESDGTEVGRTVKKFPLL-KPREYVLTWKLWEG 59
++R+F+ D+D+R +WD + L+ +GT + +KKFP REY++ ++W+
Sbjct: 87 LVRDFFWDDDFRPKWDPMLAHCKVLKECPHNGTSIVHWIKKFPFFCSDREYIIARRIWQA 146
Query: 60 RDNFFYCYMKECEHPLAPRLRKYVRVEFYRSGWRIRQI-----PGQ-NACEITMFHQEVA 113
N +YC K +P P+ K RV+ Y S W I+ + GQ +ACE+T+ H E
Sbjct: 147 -GNAYYCVTKGVPYPSLPKRDKPRRVDLYFSSWVIKPVESRKGDGQLSACEVTLLHHEDM 205
Query: 114 GLNMEMAKLAFSKGIWSYVCKMDNALRSY 142
G+ ++AKL G+W V K+ + +R+Y
Sbjct: 206 GIPKDVAKLGVRHGMWGAVKKLHSGMRAY 234
>Medtr5g007030.1 | mammalian STARD2 lipid-binding START domain
protein | HC | chr5:1173758-1179345 | 20130731
Length = 436
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 83/149 (55%), Gaps = 8/149 (5%)
Query: 1 MLRNFYMDNDYRKQWDKTVVEHNQLQVDESDGTEVGRTVKKFPLL-KPREYVLTWKLWEG 59
++R+F+ D+D+R +WD + L+ +GT + +KKFP REY++ ++W+
Sbjct: 197 LVRDFFWDDDFRPKWDPMLAHCKVLKECPHNGTSIVHWIKKFPFFCSDREYIIARRIWQA 256
Query: 60 RDNFFYCYMKECEHPLAPRLRKYVRVEFYRSGWRIRQI-----PGQ-NACEITMFHQEVA 113
N +YC K +P P+ K RV+ Y S W I+ + GQ +ACE+T+ H E
Sbjct: 257 -GNAYYCVTKGVPYPSLPKRDKPRRVDLYFSSWVIKPVESRKGDGQLSACEVTLLHHEDM 315
Query: 114 GLNMEMAKLAFSKGIWSYVCKMDNALRSY 142
G+ ++AKL G+W V K+ + +R+Y
Sbjct: 316 GIPKDVAKLGVRHGMWGAVKKLHSGMRAY 344
>Medtr1g078030.1 | mammalian STARD2 lipid-binding START domain
protein | HC | chr1:34888325-34884479 | 20130731
Length = 395
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 82/148 (55%), Gaps = 7/148 (4%)
Query: 1 MLRNFYMDNDYRKQWDKTVVEHNQLQVDESDGTEVGRTVKKFPLL-KPREYVLTWKLWEG 59
++R+F+ D+++R +WD ++ + +Q E GT + + V+KFP REY++ ++W+
Sbjct: 153 LVRDFFWDDEFRSRWDDMLIHASTIQECEVTGTMMVQWVRKFPFFCSDREYIIGRRIWDA 212
Query: 60 RDNFFYCYMKECEHPLAPRLRKYVRVEFYRSGWRIRQI----PGQ-NACEITMFHQEVAG 114
+ +YC K PR K RV+ Y S + IR + GQ +CE+ FH E G
Sbjct: 213 -ERTYYCVTKGVPCSSIPRQSKPRRVDLYYSSFFIRAVKSRKDGQLTSCEVLFFHYEDMG 271
Query: 115 LNMEMAKLAFSKGIWSYVCKMDNALRSY 142
+ E+AKL +G+W V K D LR+Y
Sbjct: 272 IPWEIAKLGVRQGMWGAVKKFDPGLRTY 299