Miyakogusa Predicted Gene
- Lj3g3v1970100.3
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v1970100.3 tr|G7JQL8|G7JQL8_MEDTR Isochorismate synthase
OS=Medicago truncatula GN=MTR_4g076520 PE=4
SV=1,83.27,0,Chorismate_bind,Chorismate binding, C-terminal; seg,NULL;
ISOCHORISMATE SYNTHASE,Isochorismate synth,CUFF.43380.3
(586 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g076520.1 | isochorismate synthase | HC | chr4:29265947-29... 933 0.0
Medtr7g011400.1 | isochorismate synthase | HC | chr7:3068355-307... 379 e-105
Medtr8g069840.2 | phylloquinone biosynthesis protein | HC | chr8... 87 3e-17
Medtr8g069840.1 | phylloquinone biosynthesis protein | HC | chr8... 87 4e-17
Medtr3g076770.1 | anthranilate synthase alpha 1 | HC | chr3:3450... 75 1e-13
Medtr1g095360.2 | para-aminobenzoate synthase | HC | chr1:428881... 75 2e-13
Medtr1g095360.1 | para-aminobenzoate synthase | HC | chr1:428881... 74 3e-13
Medtr3g070290.1 | anthranilate synthase alpha 1 | HC | chr3:3150... 74 3e-13
Medtr3g467000.1 | anthranilate synthase alpha 1 | HC | chr3:2761... 74 5e-13
>Medtr4g076520.1 | isochorismate synthase | HC |
chr4:29265947-29259741 | 20130731
Length = 567
Score = 933 bits (2411), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/554 (83%), Positives = 488/554 (88%), Gaps = 9/554 (1%)
Query: 42 ATTHKWLTHFSSTKHSNI------KKXXXXXXXXXXPLYFIH-HHRPVCQGCYLSMNGCG 94
ATT+KWLT+F +T NI K+ +Y IH HRP+C+GCYLSMNGC
Sbjct: 5 ATTNKWLTNFINTNGCNILVPHVSKRQRQQHYHHQQSMYLIHRQHRPICKGCYLSMNGCK 64
Query: 95 EGEYN--ARNPVGTIETRTLAPVASLAMAMCSLKMAISELKADPPFCTSSGIVRVQVPIE 152
EGE N R PV TIETRTL PVAS AMAM SLKMAISELK PFCTSSGIVRV+VPIE
Sbjct: 65 EGENNKRTREPVRTIETRTLPPVASAAMAMYSLKMAISELKESSPFCTSSGIVRVEVPIE 124
Query: 153 EQVEAIDWLHSQSHLLLPRCFFSGREHNPRRGNLVSVAGVGSAVFFSQPHPFSYWDWISI 212
EQVEAIDWLHSQ+HLLLPRC+FSGRE GNLVS+AGVGSAV FSQ HPFSYWDWISI
Sbjct: 125 EQVEAIDWLHSQNHLLLPRCYFSGREQKSCPGNLVSIAGVGSAVSFSQSHPFSYWDWISI 184
Query: 213 RRFLSERSPLIRAYGAIRFNAKAKMSSEWLAFGSFYFMIPQVEFNELEGGSMLTITIAWD 272
RRFLSER PLIRAYG IRFNAKAK+SSEW+AFGSFYFMIPQVEFNELEGGSML IT+AWD
Sbjct: 185 RRFLSERCPLIRAYGGIRFNAKAKVSSEWMAFGSFYFMIPQVEFNELEGGSMLNITVAWD 244
Query: 273 NALSWSWETAINELRATVCKVSSSIVKSPKQAPPTLILSSHNIPSKVDWDLAVNRALQMI 332
N L WSWE AI L+ T+CKVS+S VK PKQAPPTLILSSHNIPSK DW+LAVNRALQMI
Sbjct: 245 NDLCWSWEKAIVALQETLCKVSTSNVKFPKQAPPTLILSSHNIPSKEDWNLAVNRALQMI 304
Query: 333 EQEDSLLTKVVLARSTRVVPTADIDPLMWLACLKVEGGNAYQFFLQPPNAPAFIGNTPEQ 392
EQ DS LTKVVLARSTRVVPT +IDPL WLACLKVEGGNAYQFFLQPPNAPAFIGNTPEQ
Sbjct: 305 EQHDSSLTKVVLARSTRVVPTVNIDPLTWLACLKVEGGNAYQFFLQPPNAPAFIGNTPEQ 364
Query: 393 LFHRKRLHITSEALAGTRARGVSLALDRQIELDLLTSPKDDIEFTIVRDTIRRKLEAVCE 452
LFHRKRLHITSEALAGTRARG SLALDRQIELDLLTSPKDDIEFTIVR++IRRKLEAVCE
Sbjct: 365 LFHRKRLHITSEALAGTRARGPSLALDRQIELDLLTSPKDDIEFTIVRESIRRKLEAVCE 424
Query: 453 NVAIKPKKMIRKLPRIQHLFAQLVGKLRSEEDEFEILSSLHPSPAVCGFPTEEAQLLIAE 512
V I+PKKMIRKLPRIQHLFAQL G+LR+EEDEFEILSSLHPSPAVCGFPTE AQ+LIAE
Sbjct: 425 KVIIEPKKMIRKLPRIQHLFAQLTGRLRNEEDEFEILSSLHPSPAVCGFPTEVAQVLIAE 484
Query: 513 TEVFDRGMYAGPVGWFGGGESEFAVGIRSALVEKDLGALIYAGTGIVEGSKPYLEWDELE 572
TEVFDRGMYAGPVGWFGGGESEFAVGIRSALVE++LGALIYAGTGIVEGS PYLEWDELE
Sbjct: 485 TEVFDRGMYAGPVGWFGGGESEFAVGIRSALVEQELGALIYAGTGIVEGSNPYLEWDELE 544
Query: 573 LKTSQFTKLLKLDL 586
LKTSQFTKLLKLDL
Sbjct: 545 LKTSQFTKLLKLDL 558
>Medtr7g011400.1 | isochorismate synthase | HC |
chr7:3068355-3070095 | 20130731
Length = 260
Score = 379 bits (974), Expect = e-105, Method: Compositional matrix adjust.
Identities = 182/211 (86%), Positives = 194/211 (91%)
Query: 367 VEGGNAYQFFLQPPNAPAFIGNTPEQLFHRKRLHITSEALAGTRARGVSLALDRQIELDL 426
++G NAYQ+FLQPPNAPAF GNTPEQLFHRK LHITS+ALA TRARGVSL LD QIEL L
Sbjct: 21 IKGDNAYQYFLQPPNAPAFSGNTPEQLFHRKGLHITSDALAATRARGVSLELDHQIELYL 80
Query: 427 LTSPKDDIEFTIVRDTIRRKLEAVCENVAIKPKKMIRKLPRIQHLFAQLVGKLRSEEDEF 486
LTS KDDIEFTIVR+TIRRKLEA+CE V I KM+RKL RIQHLFAQL G+LRSEEDEF
Sbjct: 81 LTSLKDDIEFTIVRETIRRKLEAICEKVTIDSTKMVRKLLRIQHLFAQLTGRLRSEEDEF 140
Query: 487 EILSSLHPSPAVCGFPTEEAQLLIAETEVFDRGMYAGPVGWFGGGESEFAVGIRSALVEK 546
EILSSLHPSPAVCGFPTEEAQLLIAETEVFDRGMYAGPVGWFGGGES+FAVGIRSALVE+
Sbjct: 141 EILSSLHPSPAVCGFPTEEAQLLIAETEVFDRGMYAGPVGWFGGGESDFAVGIRSALVEQ 200
Query: 547 DLGALIYAGTGIVEGSKPYLEWDELELKTSQ 577
+LGALIYAGTGI EGS PYLEWDELELKTS+
Sbjct: 201 ELGALIYAGTGIDEGSNPYLEWDELELKTSK 231
>Medtr8g069840.2 | phylloquinone biosynthesis protein | HC |
chr8:29513521-29492993 | 20130731
Length = 1619
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 96/192 (50%), Gaps = 11/192 (5%)
Query: 109 TRTLAPVASLAMAMCSLKMAISELKADPPFCTSSGIVRVQVPIEEQVEAIDWLHSQ--SH 166
TRTL P +L + LK A+ LK PP C +G +R QV + +A+ W Q S
Sbjct: 79 TRTLPPALTLEDGLHKLKDALEILKLAPPSC-ETGFLRFQVLVPPSSKALSWFCCQPESS 137
Query: 167 LLLPRCFFSGREHNPRRGNLV-----SVAGVGSAVFFSQPHPFSYWDWISIRRFLSERSP 221
+ P F S +P +L V G+G+AV F P + I+R++S S
Sbjct: 138 GVFPLIFVSKNMDDPTCKSLYVNGSRGVFGIGTAVSFVHSSP---GNKSLIKRYISTDST 194
Query: 222 LIRAYGAIRFNAKAKMSSEWLAFGSFYFMIPQVEFNELEGGSMLTITIAWDNALSWSWET 281
I AYG + N S GSF F IPQ+E +E+E S+LT+T+AWDN ++
Sbjct: 195 DIVAYGFMDINLDNDSVSINHEDGSFSFFIPQIELDEMESVSILTMTLAWDNFSLSNFGK 254
Query: 282 AINELRATVCKV 293
A++ L ++ +V
Sbjct: 255 ALHLLEVSLNQV 266
>Medtr8g069840.1 | phylloquinone biosynthesis protein | HC |
chr8:29513567-29491631 | 20130731
Length = 1700
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 96/192 (50%), Gaps = 11/192 (5%)
Query: 109 TRTLAPVASLAMAMCSLKMAISELKADPPFCTSSGIVRVQVPIEEQVEAIDWLHSQ--SH 166
TRTL P +L + LK A+ LK PP C +G +R QV + +A+ W Q S
Sbjct: 79 TRTLPPALTLEDGLHKLKDALEILKLAPPSC-ETGFLRFQVLVPPSSKALSWFCCQPESS 137
Query: 167 LLLPRCFFSGREHNPRRGNLV-----SVAGVGSAVFFSQPHPFSYWDWISIRRFLSERSP 221
+ P F S +P +L V G+G+AV F P + I+R++S S
Sbjct: 138 GVFPLIFVSKNMDDPTCKSLYVNGSRGVFGIGTAVSFVHSSP---GNKSLIKRYISTDST 194
Query: 222 LIRAYGAIRFNAKAKMSSEWLAFGSFYFMIPQVEFNELEGGSMLTITIAWDNALSWSWET 281
I AYG + N S GSF F IPQ+E +E+E S+LT+T+AWDN ++
Sbjct: 195 DIVAYGFMDINLDNDSVSINHEDGSFSFFIPQIELDEMESVSILTMTLAWDNFSLSNFGK 254
Query: 282 AINELRATVCKV 293
A++ L ++ +V
Sbjct: 255 ALHLLEVSLNQV 266
>Medtr3g076770.1 | anthranilate synthase alpha 1 | HC |
chr3:34500815-34495871 | 20130731
Length = 604
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 155/360 (43%), Gaps = 39/360 (10%)
Query: 256 FNELEGGSMLTITIAWD--NALSWSWETAINELRATVCKVSSSIVKSPKQAPPTLILSSH 313
F+ +E + + + + D +++ ++ L+ V K+ + K P+ AP + L +H
Sbjct: 245 FDHVEKKAYVILWVRTDQYSSVESAYVDGTVRLKKLVAKLQDN--KLPRLAPGAVDLQTH 302
Query: 314 ---------NIPSKVDWDLAVNRALQMIEQEDSLLTKVVLARSTRVVPTADIDPLMWLAC 364
N+ ++ D AV +A + I+ D + ++VL S R DP
Sbjct: 303 HFGRPLKESNMTAEAYKD-AVLQAKEHIKAGD--IFQIVL--SQRFERRTFADPFEVYRA 357
Query: 365 LKVEGGNAYQFFLQPPNAPAFIGNTPEQLFHRKRLHITSEALAGTRARGVSLALDRQIEL 424
L+V + Y + Q + ++PE L K I + LAGT RG + D +
Sbjct: 358 LRVVNPSPYMTYFQARGC-ILVASSPEILARIKNNKIVNRPLAGTSKRGNTAEEDESLSA 416
Query: 425 DLLTSPKDDIEFTIVRDTIRRKLEAVCENVAIKPKKM--IRKLPRIQHLFAQLVGKLRSE 482
LL K E ++ D R + V ++ ++K +K+ + + + H+ + + G+L+
Sbjct: 417 KLLKDEKQCAEHVMLVDLGRNDVGKVAKSGSVKVEKLMNVERYSHVMHISSTVTGELQDH 476
Query: 483 EDEFEILSSLHPSPAVCGFPTEEAQLLIAETEVFDRGMYAGPVGWFG-GGESEFAVGIRS 541
++ L + P V G P A LI E EV RG Y+G G+ G+ + A+ +R+
Sbjct: 477 LTCWDALRAALPVGTVSGAPKVRAMQLIDELEVARRGPYSGGFGYISFSGDMDIALALRT 536
Query: 542 ALVE-----------KDLG------ALIYAGTGIVEGSKPYLEWDELELKTSQFTKLLKL 584
+ KDL A + AG GIV S P E E + K + + + L
Sbjct: 537 IVFPTGTRYDTMYSYKDLNKRQEWIAYLQAGAGIVADSDPADEHQECQNKAAGLARSIDL 596
>Medtr1g095360.2 | para-aminobenzoate synthase | HC |
chr1:42888171-42898308 | 20130731
Length = 838
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 99/192 (51%), Gaps = 5/192 (2%)
Query: 388 NTPEQLFHRKRLH-ITSEALAGTRARGVSLALDRQIELDLLTSPKDDIEFTIVRDTIRRK 446
++PE+ R + ++ + GT ARG + D+Q++L L S KD E ++ D +R
Sbjct: 637 SSPERFLQLDRSDMLEAKPIKGTIARGATEEEDKQLKLKLQLSEKDQAENLMIVDLLRND 696
Query: 447 LEAVCENVAIK-PKKM-IRKLPRIQHLFAQLVGKLRSEEDEFEILSSLHPSPAVCGFPTE 504
L VC+ ++ P M ++ + + + + GK RS+ + + + P ++ G P
Sbjct: 697 LGRVCDPGSVDVPHLMEVQSYATVHTMVSTIRGKKRSDISAVDCVKAAFPGGSMTGAPKL 756
Query: 505 EAQLLIAETEVFDRGMYAGPVGWFGGGES-EFAVGIRSALVEKDLGALIYAGTGIVEGSK 563
+ L+ E RG+Y+G +G+F ++ + + IR+ ++ + A I AG IV S
Sbjct: 757 RSMELLDSLESCSRGIYSGCIGFFSYNQTFDLNIVIRTVVIHEG-EASIGAGGAIVALSN 815
Query: 564 PYLEWDELELKT 575
P E++E+ LKT
Sbjct: 816 PEDEYEEMILKT 827
>Medtr1g095360.1 | para-aminobenzoate synthase | HC |
chr1:42888171-42898308 | 20130731
Length = 873
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 99/192 (51%), Gaps = 5/192 (2%)
Query: 388 NTPEQLFHRKRLH-ITSEALAGTRARGVSLALDRQIELDLLTSPKDDIEFTIVRDTIRRK 446
++PE+ R + ++ + GT ARG + D+Q++L L S KD E ++ D +R
Sbjct: 672 SSPERFLQLDRSDMLEAKPIKGTIARGATEEEDKQLKLKLQLSEKDQAENLMIVDLLRND 731
Query: 447 LEAVCENVAIK-PKKM-IRKLPRIQHLFAQLVGKLRSEEDEFEILSSLHPSPAVCGFPTE 504
L VC+ ++ P M ++ + + + + GK RS+ + + + P ++ G P
Sbjct: 732 LGRVCDPGSVDVPHLMEVQSYATVHTMVSTIRGKKRSDISAVDCVKAAFPGGSMTGAPKL 791
Query: 505 EAQLLIAETEVFDRGMYAGPVGWFGGGES-EFAVGIRSALVEKDLGALIYAGTGIVEGSK 563
+ L+ E RG+Y+G +G+F ++ + + IR+ ++ + A I AG IV S
Sbjct: 792 RSMELLDSLESCSRGIYSGCIGFFSYNQTFDLNIVIRTVVIHEG-EASIGAGGAIVALSN 850
Query: 564 PYLEWDELELKT 575
P E++E+ LKT
Sbjct: 851 PEDEYEEMILKT 862
>Medtr3g070290.1 | anthranilate synthase alpha 1 | HC |
chr3:31501481-31507102 | 20130731
Length = 602
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 107/248 (43%), Gaps = 21/248 (8%)
Query: 357 DPLMWLACLKVEGGNAYQFFLQPPNAPAFIGNTPEQLFHRKRLHITSEALAGTRARGVSL 416
DP L+V + Y +LQ + ++PE L K I + LAGT RG +
Sbjct: 348 DPFEVYRALRVVNPSPYMTYLQARGC-ILVASSPEILARIKNNKIVNRPLAGTAKRGNTP 406
Query: 417 ALDRQIELDLLTSPKDDIEFTIVRDTIRRKLEAVCENVAIKPKKM--IRKLPRIQHLFAQ 474
D + LL K E ++ D R + V ++ ++K +K+ + + + H+ +
Sbjct: 407 EEDENLSAKLLKDEKQCAEHVMLVDLGRNDVGKVAKSGSVKVEKLMNVERYSHVMHISST 466
Query: 475 LVGKLRSEEDEFEILSSLHPSPAVCGFPTEEAQLLIAETEVFDRGMYAGPVGWFG-GGES 533
+ G+L+ ++ L + P V G P A LI E EV RG Y+G G+ G+
Sbjct: 467 VTGELQDNLTCWDALRAALPVGTVSGAPKVRAMQLIDELEVSRRGPYSGGFGYISFSGDM 526
Query: 534 EFAVGIRSALVE-----------KDLG------ALIYAGTGIVEGSKPYLEWDELELKTS 576
+ A+ +R+ + KDL A + AG GIV S P E E + K +
Sbjct: 527 DIALALRTIVFPTGTRYDTMYSYKDLNKRQEWIAYLQAGAGIVADSDPADEHQECQNKAA 586
Query: 577 QFTKLLKL 584
+ + L
Sbjct: 587 GLARSIDL 594
>Medtr3g467000.1 | anthranilate synthase alpha 1 | HC |
chr3:27612292-27607418 | 20130731
Length = 601
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 106/248 (42%), Gaps = 21/248 (8%)
Query: 357 DPLMWLACLKVEGGNAYQFFLQPPNAPAFIGNTPEQLFHRKRLHITSEALAGTRARGVSL 416
DP L+V + Y + Q + ++PE L K I + LAGT RG +
Sbjct: 347 DPFEVYRALRVVNPSPYMTYFQARGC-ILVASSPEILARIKNNKIVNRPLAGTSKRGNTA 405
Query: 417 ALDRQIELDLLTSPKDDIEFTIVRDTIRRKLEAVCENVAIKPKKM--IRKLPRIQHLFAQ 474
D + LL K E ++ D R + V ++ ++K +K+ + + + H+ +
Sbjct: 406 EEDESLSAKLLKDEKQCAEHVMLVDLGRNDVGKVAKSGSVKVEKLMNVERYSHVMHISST 465
Query: 475 LVGKLRSEEDEFEILSSLHPSPAVCGFPTEEAQLLIAETEVFDRGMYAGPVGWFG-GGES 533
+ G+L+ ++ L + P V G P A LI E EV RG Y+G G+ G+
Sbjct: 466 VTGELQDHLTCWDALRAALPVGTVSGAPKVRAMQLIDELEVARRGPYSGGFGYISFSGDM 525
Query: 534 EFAVGIRSALVE-----------KDLG------ALIYAGTGIVEGSKPYLEWDELELKTS 576
+ A+ +R+ + KDL A + AG GIV S P E E + K +
Sbjct: 526 DIALALRTIVFPTGTRYDTMYSYKDLNKRQEWIAYLQAGAGIVADSDPADEHQECQNKAA 585
Query: 577 QFTKLLKL 584
+ + L
Sbjct: 586 GLARSIDL 593