Miyakogusa Predicted Gene

Lj3g3v1957980.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1957980.1 Non Characterized Hit- tr|A8Q603|A8Q603_BRUMA
Putative LAG1-interacting protein OS=Brugia malayi GN=,28.96,3e-19,no
description,Zinc finger, RING/FYVE/PHD-type; ZF_RING_1,Zinc finger,
RING-type, conserved site; SU,CUFF.43438.1
         (188 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g005800.1 | C3HC4-type RING finger protein | HC | chr3:390...   232   1e-61
Medtr3g005790.1 | zinc finger, C3HC4 type (RING finger) protein ...   168   3e-42
Medtr2g094040.1 | transmembrane protein, putative | LC | chr2:40...   152   2e-37

>Medtr3g005800.1 | C3HC4-type RING finger protein | HC |
           chr3:390504-387667 | 20130731
          Length = 192

 Score =  232 bits (592), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 111/186 (59%), Positives = 137/186 (73%), Gaps = 3/186 (1%)

Query: 4   EGPPLNDLCSVCHGNFHIPCQANCSHWFCANCIMLVWNHGSAIQPCKCPLCRRPITLLVP 63
           EGPP NDLCS+CHGNF +PCQANCSHWFCANCI+ VW + S +QPCKCPLCRRPI LLVP
Sbjct: 9   EGPPTNDLCSICHGNFQLPCQANCSHWFCANCIIQVWQYSSPLQPCKCPLCRRPINLLVP 68

Query: 64  TEQDSASHRQEPEVAHVLSQIQTYNRFFGARSSGPL-QRMLDLPFLLRRLAREFLDPQRS 122
           T+    ++ ++  +   L+ IQ YNR FG +S+  + QR+ DLPFLL+RL ++F++P  S
Sbjct: 69  TDVVDDANSEQDRLN--LADIQRYNRVFGQQSNASIVQRLRDLPFLLKRLFKDFVNPNTS 126

Query: 123 LPLVIRARVYIAMIISAIYVFSPIDIIPEGIWXXXXXXXXXXXXXXXXXHVAALYRSVLY 182
           LPLVIRARV+I M++S IY+FSPIDIIPEG+                  HVAALYRSVLY
Sbjct: 127 LPLVIRARVFITMLLSIIYIFSPIDIIPEGMLGIIGLLDDVLIALIFFLHVAALYRSVLY 186

Query: 183 RRHGGS 188
            RHGGS
Sbjct: 187 LRHGGS 192


>Medtr3g005790.1 | zinc finger, C3HC4 type (RING finger) protein |
           LC | chr3:384993-384380 | 20130731
          Length = 162

 Score =  168 bits (425), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 77/139 (55%), Positives = 104/139 (74%), Gaps = 6/139 (4%)

Query: 4   EGPPLNDLCSVCHGNFHIPCQANCSHWFCANCIMLVWNHGSAIQPCKCPLCRRPITLLVP 63
           EGP  ND CS+CH NF +PCQANCSHWFCANCI+ VW + S +QPCKCPLCRRPI LL+P
Sbjct: 10  EGPATNDRCSICHENFQLPCQANCSHWFCANCIIQVWQYSSPLQPCKCPLCRRPINLLLP 69

Query: 64  TE-QDSASHRQEPEVAHVLSQIQTYNRFFGARSSGPL-QRMLDLPFLLRRLAREFLDPQR 121
           T+  D+ ++ Q+     +L  IQ YNR FG +S+  + +R+ DLPFLLRRL R+F +P  
Sbjct: 70  TDVVDNNNYEQD----SLLGDIQKYNRLFGEQSNASIAERLRDLPFLLRRLFRDFANPNV 125

Query: 122 SLPLVIRARVYIAMIISAI 140
           S PLVIRAR+++ ++++ +
Sbjct: 126 SFPLVIRARIFVTVVVNRV 144


>Medtr2g094040.1 | transmembrane protein, putative | LC |
           chr2:40071375-40070207 | 20130731
          Length = 217

 Score =  152 bits (383), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 77/152 (50%), Positives = 96/152 (63%), Gaps = 11/152 (7%)

Query: 3   REGPPLNDLCSVCHGNFHIPCQAN--CSHWFCANCIMLVWNHGSAIQPCKCPLCRRPITL 60
           +EGPP   +CS CH  F I CQA   CSHWFC  C M+ W     I+PCKCP C RPITL
Sbjct: 60  KEGPPSKFVCSKCHVKFQIICQATDICSHWFCGTCTMVDWEQSPDIEPCKCPHCHRPITL 119

Query: 61  LVPTE-----QDSASHRQEPEVAHVLSQIQTYNRFFGARSSGPL-QRMLDLPFLLRRLAR 114
           LVPTE      +   +R +PE   VL  IQTYN  F  +S  P+ QR+LDLPFLLR L +
Sbjct: 120 LVPTENHNYDDNGNKYRHDPE---VLIGIQTYNCIFSDQSKAPITQRLLDLPFLLRTLFK 176

Query: 115 EFLDPQRSLPLVIRARVYIAMIISAIYVFSPI 146
           +F++P   LP + RARV I MI+  IY+ +P+
Sbjct: 177 DFIEPSTFLPFLFRARVVITMILIVIYILNPL 208