Miyakogusa Predicted Gene

Lj3g3v1953410.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1953410.1 Non Characterized Hit- tr|K4BI83|K4BI83_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,36.43,4e-17,LONGIN,Longin domain; Longin,Longin domain;
SNARE-like,Longin-like domain; no description,Longin dom,CUFF.43353.1
         (175 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g010290.1 | VAMP-like protein | HC | chr3:2402422-2399809 ...   288   1e-78
Medtr3g091610.1 | VAMP-like protein, putative | HC | chr3:416983...    60   1e-09
Medtr1g111890.1 | synaptobrevin-like protein | HC | chr1:5059669...    54   6e-08
Medtr2g028790.1 | synaptobrevin-like protein | HC | chr2:1069094...    54   1e-07
Medtr2g436870.1 | synaptobrevin-like protein | HC | chr2:1440722...    53   2e-07
Medtr4g083490.1 | synaptobrevin-like protein | HC | chr4:3261613...    53   2e-07
Medtr4g022570.1 | synaptobrevin-like protein | HC | chr4:7537988...    49   2e-06
Medtr1g047720.1 | synaptobrevin-like protein | HC | chr1:1804372...    47   9e-06

>Medtr3g010290.1 | VAMP-like protein | HC | chr3:2402422-2399809 |
           20130731
          Length = 278

 Score =  288 bits (738), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 136/175 (77%), Positives = 151/175 (86%)

Query: 1   MDSIPNKVYYCCVSKGNHVLYAYSGAGQEVENVAALCLESAPPFHRWYFETAGKRSYGFL 60
           MDSI NKV+YCCVSKG+H+LYAYSG  +EVENV ALCLE+ P FHRWYFET GKR+YGFL
Sbjct: 1   MDSIQNKVHYCCVSKGSHILYAYSGGDKEVENVTALCLEAVPSFHRWYFETIGKRTYGFL 60

Query: 61  MEDGYVYFTIVDEGLGNSVVLRFLEHVRDEFRKLSKKGSRGKLPNMNSTHIQEKLVPIIR 120
           +EDGYVYFTIVDEGLGN VVLRFLEHVRDEFRK+++KGSRG LPN NS +IQEKLVP+IR
Sbjct: 61  VEDGYVYFTIVDEGLGNLVVLRFLEHVRDEFRKVARKGSRGFLPNANSVYIQEKLVPVIR 120

Query: 121 GLITSLENVSHGSGNRRDEKSPSFHVDLSPSPSNLNGQIEGASSTKAPLLGRSSK 175
            LITSLENVSH   N RDE S +F +  SPSPSNLNGQIE   STKAPLLG+SSK
Sbjct: 121 NLITSLENVSHSGSNWRDETSSTFGIGPSPSPSNLNGQIESVVSTKAPLLGKSSK 175


>Medtr3g091610.1 | VAMP-like protein, putative | HC |
          chr3:41698304-41699753 | 20130731
          Length = 232

 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 3/87 (3%)

Query: 5  PNKVYYCCVSKGNHVLYAYSGAGQE---VENVAALCLESAPPFHRWYFETAGKRSYGFLM 61
          P+ + Y C++K   +L  +     +   +E +A+ CLE +PP H ++  T   R+Y FL+
Sbjct: 10 PDLIQYLCIAKSTTILAHHINKNPKDSNIETLASKCLEQSPPNHSFFSHTVNNRTYTFLI 69

Query: 62 EDGYVYFTIVDEGLGNSVVLRFLEHVR 88
          E  +V F I D  L  S  + FL  +R
Sbjct: 70 EPPFVLFAIFDTHLLKSHAITFLNRIR 96


>Medtr1g111890.1 | synaptobrevin-like protein | HC |
          chr1:50596698-50600474 | 20130731
          Length = 238

 Score = 54.3 bits (129), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 44/86 (51%)

Query: 8  VYYCCVSKGNHVLYAYSGAGQEVENVAALCLESAPPFHRWYFETAGKRSYGFLMEDGYVY 67
          + Y  V+KG  VL  ++        +A  CL   P     Y  +    ++ FL+++G+V+
Sbjct: 6  LIYSFVAKGTVVLAEHTQYTGNFSTIAVQCLNKLPSNSTKYTYSCDGHTFNFLLDNGFVF 65

Query: 68 FTIVDEGLGNSVVLRFLEHVRDEFRK 93
            + DE +G SV   FLE V+D+F +
Sbjct: 66 LVVADESIGRSVPFVFLERVKDDFNQ 91


>Medtr2g028790.1 | synaptobrevin-like protein | HC |
          chr2:10690943-10695600 | 20130731
          Length = 220

 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 23/85 (27%), Positives = 44/85 (51%)

Query: 7  KVYYCCVSKGNHVLYAYSGAGQEVENVAALCLESAPPFHRWYFETAGKRSYGFLMEDGYV 66
          ++ Y  VS+G  +L  ++       ++A  CL+  P  +  +       ++ +L+++GY 
Sbjct: 9  QLIYAFVSRGTVILAEFTEFSGNFNSIAFQCLQKLPSTNNKFTYNCDNHTFNYLIDNGYT 68

Query: 67 YFTIVDEGLGNSVVLRFLEHVRDEF 91
          Y  + DE  G  V + FLE V+D+F
Sbjct: 69 YCVVADETTGRQVPMAFLERVKDDF 93


>Medtr2g436870.1 | synaptobrevin-like protein | HC |
          chr2:14407228-14411283 | 20130731
          Length = 221

 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 43/84 (51%)

Query: 10 YCCVSKGNHVLYAYSGAGQEVENVAALCLESAPPFHRWYFETAGKRSYGFLMEDGYVYFT 69
          Y  V++G  VL  Y+        +AA CL+  P  +  +  +    ++ FL+EDGY Y  
Sbjct: 8  YSFVARGTMVLAEYTEFTGNFPAIAAQCLQKLPSSNNKFTYSCDHHTFNFLVEDGYAYCV 67

Query: 70 IVDEGLGNSVVLRFLEHVRDEFRK 93
          +  E +   + + FLE V+ +F+K
Sbjct: 68 VAKESVSKQISIAFLERVKADFKK 91


>Medtr4g083490.1 | synaptobrevin-like protein | HC |
          chr4:32616135-32610150 | 20130731
          Length = 220

 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 44/82 (53%)

Query: 10 YCCVSKGNHVLYAYSGAGQEVENVAALCLESAPPFHRWYFETAGKRSYGFLMEDGYVYFT 69
          Y  VS+G+ +L  Y+       ++A  CL+  P  +  +       ++ +L+++GY Y  
Sbjct: 10 YAFVSRGSVILSEYTEFSGNFNSIAFQCLQKLPASNNKFTYNCDGHTFNYLVDNGYTYCV 69

Query: 70 IVDEGLGNSVVLRFLEHVRDEF 91
          + DE +G  V + FLE V+D+F
Sbjct: 70 VADETVGRQVPVAFLERVKDDF 91


>Medtr4g022570.1 | synaptobrevin-like protein | HC |
          chr4:7537988-7532569 | 20130731
          Length = 219

 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/84 (26%), Positives = 42/84 (50%)

Query: 10 YCCVSKGNHVLYAYSGAGQEVENVAALCLESAPPFHRWYFETAGKRSYGFLMEDGYVYFT 69
          Y  V++G  +L  YS        +A  CL+  P  +  +       ++ FL+++G+ Y  
Sbjct: 8  YSFVARGTVILAEYSDFTGNFTTIALQCLQKLPASNNRFTYNCDGHTFSFLVDNGFTYCV 67

Query: 70 IVDEGLGNSVVLRFLEHVRDEFRK 93
          +  E +G  + + FLE ++D+F K
Sbjct: 68 VAVESVGRQIPIAFLERIKDDFNK 91


>Medtr1g047720.1 | synaptobrevin-like protein | HC |
          chr1:18043724-18041195 | 20130731
          Length = 221

 Score = 47.0 bits (110), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 21/84 (25%), Positives = 42/84 (50%)

Query: 10 YCCVSKGNHVLYAYSGAGQEVENVAALCLESAPPFHRWYFETAGKRSYGFLMEDGYVYFT 69
          Y  V++G  +L  Y+        +A+ CL+  P  +  +       ++ +L+++G+ Y  
Sbjct: 8  YSFVARGTMILAEYTEFSGNFSTIASQCLQKLPSSNNRFTYNCDGHTFNYLVDNGFTYCV 67

Query: 70 IVDEGLGNSVVLRFLEHVRDEFRK 93
          +  E  G  + + FLE V++EF K
Sbjct: 68 VAVESAGRQIPIAFLERVKEEFSK 91