Miyakogusa Predicted Gene
- Lj3g3v1933130.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v1933130.2 tr|G7J0E1|G7J0E1_MEDTR WD-repeat protein-like
protein OS=Medicago truncatula GN=MTR_3g010010 PE=4
SV,86.61,0,PREDICTED PROTEIN (FRAGMENT),NULL; WD40 REPEAT
PROTEIN,NULL; no description,WD40/YVTN repeat-like-co,CUFF.43327.2
(446 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g010010.2 | transducin/WD40 repeat protein | HC | chr3:226... 762 0.0
Medtr3g010010.1 | transducin/WD40 repeat protein | HC | chr3:226... 761 0.0
Medtr2g028050.1 | transducin/WD40 repeat protein | HC | chr2:103... 683 0.0
Medtr7g022190.1 | transducin/WD40 repeat protein | HC | chr7:710... 586 e-167
Medtr3g074070.2 | transducin/WD40 repeat protein | HC | chr3:334... 515 e-146
Medtr3g074070.4 | transducin/WD40 repeat protein | HC | chr3:334... 514 e-146
Medtr3g074070.1 | transducin/WD40 repeat protein | HC | chr3:334... 513 e-145
Medtr3g074070.3 | transducin/WD40 repeat protein | HC | chr3:334... 418 e-117
Medtr3g010110.1 | transducin/WD40 repeat protein | HC | chr3:230... 390 e-108
Medtr3g074070.5 | transducin/WD40 repeat protein | HC | chr3:334... 385 e-107
Medtr3g074070.6 | transducin/WD40 repeat protein | HC | chr3:334... 385 e-107
Medtr4g119620.1 | transducin/WD40 repeat protein | HC | chr4:495... 60 3e-09
Medtr4g088640.1 | WD40 domain protein | LC | chr4:35254776-35252... 60 4e-09
Medtr6g004040.1 | katanin p80 WD40 repeat subunit B1-like protei... 59 9e-09
Medtr5g022690.1 | U4/U6 small nuclear ribonucleoprotein PRP4 | H... 59 1e-08
Medtr4g125710.1 | transducin/WD-like repeat-protein | HC | chr4:... 55 2e-07
Medtr5g016350.2 | transducin family protein/WD-40 repeat protein... 55 2e-07
Medtr5g016350.1 | transducin family protein/WD-40 repeat protein... 55 2e-07
Medtr2g012630.1 | katanin p80 WD40 repeat subunit B1-like protei... 55 2e-07
Medtr2g012630.2 | katanin p80 WD40 repeat subunit B1-like protei... 54 2e-07
Medtr5g016370.1 | transducin family protein/WD-40 repeat protein... 54 3e-07
Medtr3g106080.1 | TBP-associated factor 5 | HC | chr3:48932864-4... 54 3e-07
Medtr3g045130.1 | U4/U6 small nuclear ribonucleoprotein PRP4 | H... 54 4e-07
Medtr3g045130.2 | U4/U6 small nuclear ribonucleoprotein PRP4 | H... 54 4e-07
Medtr7g086360.1 | U5 small nuclear ribonucleoprotein 40 kDa-like... 53 5e-07
Medtr1g044720.1 | Pre-mRNA-processing factor | HC | chr1:1688845... 52 2e-06
Medtr1g072140.1 | transducin/WD40 repeat protein | HC | chr1:320... 50 4e-06
Medtr1g054300.1 | WD-40 repeat protein/notchless protein, putati... 49 7e-06
>Medtr3g010010.2 | transducin/WD40 repeat protein | HC |
chr3:2266588-2260075 | 20130731
Length = 447
Score = 762 bits (1967), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/417 (86%), Positives = 384/417 (92%)
Query: 30 VNRETXXXXXXXXXXXXXXXKVVDTTAAHARRGQDIQGIPWDSLSITRERYRQTRLEQYK 89
+NRE K VDTTAA ARRGQDIQGIPWDSLSITRERYRQTRL+QYK
Sbjct: 31 INREGGDAESDVDEYDYSSSKAVDTTAAQARRGQDIQGIPWDSLSITRERYRQTRLDQYK 90
Query: 90 NYENIPHSGEKSGKDCINTKKGFSFYEFQKNSRSVKSTILHFQLRNLVWATSKHDVYLMS 149
NYENI HSG++SGKDC +T KG+SFYEF++NSRS KSTILHFQLRNLVWATSKHDVYLMS
Sbjct: 91 NYENILHSGDRSGKDCKSTDKGYSFYEFRRNSRSAKSTILHFQLRNLVWATSKHDVYLMS 150
Query: 150 QFSVTHWSSLTSTRSEVLNVSGHVAPSEKHPGSLLEGFTHTQVSTLAVKEKLLVAGGFQG 209
QFSVTHWSSLT T SEVLNVSGHVAPSEKHPGSLLEGFTHTQVSTLAVK+ LLVAGGFQG
Sbjct: 151 QFSVTHWSSLTCTSSEVLNVSGHVAPSEKHPGSLLEGFTHTQVSTLAVKDNLLVAGGFQG 210
Query: 210 ELICKHLDRPGVSFCSRTTYDDNAITNALEIYASPSGAVHFTASNNDSVVRDFDMEKFQL 269
ELICKHLDRPGVSFCSRTTYDDNAITNA+EIY SPSGAVHFTASNND +R+FDMEKFQL
Sbjct: 211 ELICKHLDRPGVSFCSRTTYDDNAITNAIEIYDSPSGAVHFTASNNDCGIRNFDMEKFQL 270
Query: 270 SKHFRFPWPVNHTSLSPNGKLLLIVGDNPESMLVDSQTGKTIISLCGHLDFSFASAWHPD 329
SKHFRFPWPVNHTSLSP+GKLLLIVGDNPESMLVDSQ GKTI L GHLDFSFAS+W+PD
Sbjct: 271 SKHFRFPWPVNHTSLSPDGKLLLIVGDNPESMLVDSQNGKTIAPLSGHLDFSFASSWNPD 330
Query: 330 GMTFATGNQDKTCRIWDMRNLSKSVAVLKGNLGAIRSIRYTSDGQYLAMAEPADFVHVYD 389
G+TFATGNQDKTCRIWDMRNLSKSVAVLKGNLGAIRSIR++SDG+Y+A+AEPADFVHVYD
Sbjct: 331 GVTFATGNQDKTCRIWDMRNLSKSVAVLKGNLGAIRSIRHSSDGKYMAIAEPADFVHVYD 390
Query: 390 VKSGYEREQEIDFFGEISGISFSPDTESLFIGVWDRTYGSLLEYGRRQNYSYLDSMI 446
VKSGYE+EQEIDFFGEISGISFSPDTESLFIGVWDRTYGSLLEYGRR NYSYLDSMI
Sbjct: 391 VKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRTYGSLLEYGRRHNYSYLDSMI 447
>Medtr3g010010.1 | transducin/WD40 repeat protein | HC |
chr3:2267177-2260075 | 20130731
Length = 489
Score = 761 bits (1966), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/417 (86%), Positives = 384/417 (92%)
Query: 30 VNRETXXXXXXXXXXXXXXXKVVDTTAAHARRGQDIQGIPWDSLSITRERYRQTRLEQYK 89
+NRE K VDTTAA ARRGQDIQGIPWDSLSITRERYRQTRL+QYK
Sbjct: 73 INREGGDAESDVDEYDYSSSKAVDTTAAQARRGQDIQGIPWDSLSITRERYRQTRLDQYK 132
Query: 90 NYENIPHSGEKSGKDCINTKKGFSFYEFQKNSRSVKSTILHFQLRNLVWATSKHDVYLMS 149
NYENI HSG++SGKDC +T KG+SFYEF++NSRS KSTILHFQLRNLVWATSKHDVYLMS
Sbjct: 133 NYENILHSGDRSGKDCKSTDKGYSFYEFRRNSRSAKSTILHFQLRNLVWATSKHDVYLMS 192
Query: 150 QFSVTHWSSLTSTRSEVLNVSGHVAPSEKHPGSLLEGFTHTQVSTLAVKEKLLVAGGFQG 209
QFSVTHWSSLT T SEVLNVSGHVAPSEKHPGSLLEGFTHTQVSTLAVK+ LLVAGGFQG
Sbjct: 193 QFSVTHWSSLTCTSSEVLNVSGHVAPSEKHPGSLLEGFTHTQVSTLAVKDNLLVAGGFQG 252
Query: 210 ELICKHLDRPGVSFCSRTTYDDNAITNALEIYASPSGAVHFTASNNDSVVRDFDMEKFQL 269
ELICKHLDRPGVSFCSRTTYDDNAITNA+EIY SPSGAVHFTASNND +R+FDMEKFQL
Sbjct: 253 ELICKHLDRPGVSFCSRTTYDDNAITNAIEIYDSPSGAVHFTASNNDCGIRNFDMEKFQL 312
Query: 270 SKHFRFPWPVNHTSLSPNGKLLLIVGDNPESMLVDSQTGKTIISLCGHLDFSFASAWHPD 329
SKHFRFPWPVNHTSLSP+GKLLLIVGDNPESMLVDSQ GKTI L GHLDFSFAS+W+PD
Sbjct: 313 SKHFRFPWPVNHTSLSPDGKLLLIVGDNPESMLVDSQNGKTIAPLSGHLDFSFASSWNPD 372
Query: 330 GMTFATGNQDKTCRIWDMRNLSKSVAVLKGNLGAIRSIRYTSDGQYLAMAEPADFVHVYD 389
G+TFATGNQDKTCRIWDMRNLSKSVAVLKGNLGAIRSIR++SDG+Y+A+AEPADFVHVYD
Sbjct: 373 GVTFATGNQDKTCRIWDMRNLSKSVAVLKGNLGAIRSIRHSSDGKYMAIAEPADFVHVYD 432
Query: 390 VKSGYEREQEIDFFGEISGISFSPDTESLFIGVWDRTYGSLLEYGRRQNYSYLDSMI 446
VKSGYE+EQEIDFFGEISGISFSPDTESLFIGVWDRTYGSLLEYGRR NYSYLDSMI
Sbjct: 433 VKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRTYGSLLEYGRRHNYSYLDSMI 489
>Medtr2g028050.1 | transducin/WD40 repeat protein | HC |
chr2:10318086-10324758 | 20130731
Length = 447
Score = 683 bits (1763), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/396 (79%), Positives = 358/396 (90%)
Query: 50 KVVDTTAAHARRGQDIQGIPWDSLSITRERYRQTRLEQYKNYENIPHSGEKSGKDCINTK 109
++ DTTAA ARRG+DIQGIPWD LSITRE+YR+TRLEQYKNYENI SGE S K+C T+
Sbjct: 52 RITDTTAAEARRGKDIQGIPWDRLSITREKYRETRLEQYKNYENIQRSGELSEKECKATQ 111
Query: 110 KGFSFYEFQKNSRSVKSTILHFQLRNLVWATSKHDVYLMSQFSVTHWSSLTSTRSEVLNV 169
KG +Y+F +N+RSVKSTILHFQLRNLVW+TSKHDVYL+ +S+ HWSSL+S RSEVLNV
Sbjct: 112 KGGLYYDFWQNTRSVKSTILHFQLRNLVWSTSKHDVYLVVHYSIVHWSSLSSKRSEVLNV 171
Query: 170 SGHVAPSEKHPGSLLEGFTHTQVSTLAVKEKLLVAGGFQGELICKHLDRPGVSFCSRTTY 229
SGHVAP EKHPGSLLEGFT TQ+STLAV++ LL+AGGFQGELICK+LDRPGVSFCSRTTY
Sbjct: 172 SGHVAPCEKHPGSLLEGFTQTQISTLAVRDNLLIAGGFQGELICKYLDRPGVSFCSRTTY 231
Query: 230 DDNAITNALEIYASPSGAVHFTASNNDSVVRDFDMEKFQLSKHFRFPWPVNHTSLSPNGK 289
+DNAITNA+EIY PSGAVHF ASNND +RDFDME FQL+KH FPWPVNHTSLSPNGK
Sbjct: 232 EDNAITNAVEIYEHPSGAVHFMASNNDGGIRDFDMETFQLTKHSCFPWPVNHTSLSPNGK 291
Query: 290 LLLIVGDNPESMLVDSQTGKTIISLCGHLDFSFASAWHPDGMTFATGNQDKTCRIWDMRN 349
L+IVGDNP+ +LVD+QTGKTI LCGHLD+SFASAWHPDG FATGNQDKTCRIWD+RN
Sbjct: 292 QLVIVGDNPDGLLVDAQTGKTIAPLCGHLDYSFASAWHPDGFIFATGNQDKTCRIWDVRN 351
Query: 350 LSKSVAVLKGNLGAIRSIRYTSDGQYLAMAEPADFVHVYDVKSGYEREQEIDFFGEISGI 409
LSKSVAVLKGNLGAIRSIR+TSDG+Y+AMAEPADFVHVYD K G+E+EQEIDFFGE+SG+
Sbjct: 352 LSKSVAVLKGNLGAIRSIRFTSDGRYMAMAEPADFVHVYDAKQGFEKEQEIDFFGEVSGV 411
Query: 410 SFSPDTESLFIGVWDRTYGSLLEYGRRQNYSYLDSM 445
SFSPDTESLFIGVWDRTYGSLL++ R +NY+YLD +
Sbjct: 412 SFSPDTESLFIGVWDRTYGSLLQFNRHRNYTYLDYL 447
>Medtr7g022190.1 | transducin/WD40 repeat protein | HC |
chr7:7106011-7099839 | 20130731
Length = 440
Score = 586 bits (1511), Expect = e-167, Method: Compositional matrix adjust.
Identities = 265/395 (67%), Positives = 325/395 (82%)
Query: 50 KVVDTTAAHARRGQDIQGIPWDSLSITRERYRQTRLEQYKNYENIPHSGEKSGKDCINTK 109
KV DT+AAHAR+G+DIQGIPW+ L+ITRE YR TRLEQY+N+ENI SGE + KDC +
Sbjct: 44 KVTDTSAAHARKGKDIQGIPWEMLNITRESYRLTRLEQYRNFENILTSGETADKDCKQVQ 103
Query: 110 KGFSFYEFQKNSRSVKSTILHFQLRNLVWATSKHDVYLMSQFSVTHWSSLTSTRSEVLNV 169
KG +YEF N+R+VK TILHFQLRNLVWATSKHDVYL+S +S+ HWSSL+ SE++N
Sbjct: 104 KGDKYYEFFYNTRTVKPTILHFQLRNLVWATSKHDVYLVSNYSIKHWSSLSGNLSEIINF 163
Query: 170 SGHVAPSEKHPGSLLEGFTHTQVSTLAVKEKLLVAGGFQGELICKHLDRPGVSFCSRTTY 229
GHVAP+E+ G+ +EGF+ TQ+STLAVK+ LVAGGFQGEL CK LD+ GVSFC+RTT+
Sbjct: 164 LGHVAPTERCAGNQMEGFSQTQISTLAVKDNFLVAGGFQGELTCKRLDKKGVSFCTRTTH 223
Query: 230 DDNAITNALEIYASPSGAVHFTASNNDSVVRDFDMEKFQLSKHFRFPWPVNHTSLSPNGK 289
DDNAITNA+EIY S SGA HF A+NNDS VR++D+EKFQL FPWPVNHTS+SP+ K
Sbjct: 224 DDNAITNAVEIYESLSGATHFIAANNDSGVREYDIEKFQLLNQLHFPWPVNHTSISPDRK 283
Query: 290 LLLIVGDNPESMLVDSQTGKTIISLCGHLDFSFASAWHPDGMTFATGNQDKTCRIWDMRN 349
L+ +VGDN E +LVD Q GKT+ +L GH D+SFASAWHP+G+ FATGNQDKTCR+WD RN
Sbjct: 284 LMTVVGDNLEGLLVDPQNGKTVATLSGHQDYSFASAWHPNGLAFATGNQDKTCRVWDARN 343
Query: 350 LSKSVAVLKGNLGAIRSIRYTSDGQYLAMAEPADFVHVYDVKSGYEREQEIDFFGEISGI 409
+S +A+LK NLGA RSIR++SDGQ++ +AEPADFVHVY + YE+ QEIDFFGEISG+
Sbjct: 344 VSSPIAILKNNLGASRSIRFSSDGQFMVVAEPADFVHVYSTTANYEKSQEIDFFGEISGV 403
Query: 410 SFSPDTESLFIGVWDRTYGSLLEYGRRQNYSYLDS 444
S SPD E ++IG+WDRTY SLL+Y RR +Y YLDS
Sbjct: 404 SVSPDDECMYIGIWDRTYASLLQYNRRHSYHYLDS 438
>Medtr3g074070.2 | transducin/WD40 repeat protein | HC |
chr3:33432724-33438185 | 20130731
Length = 457
Score = 515 bits (1327), Expect = e-146, Method: Compositional matrix adjust.
Identities = 239/394 (60%), Positives = 309/394 (78%), Gaps = 1/394 (0%)
Query: 53 DTTAAHARRGQDIQGIPWDSLSITRERYRQTRLEQYKNYENIPHSGEKSGKDCINTKKGF 112
DT+A AR G+DIQGIPW+ L+ +R+ YR+TRL+QYKNYE + S E K+C+ +KG
Sbjct: 65 DTSAFEARNGKDIQGIPWEKLNYSRDEYRETRLKQYKNYECLTRSREDLDKECLEVEKGN 124
Query: 113 SFYEFQKNSRSVKSTILHFQLRNLVWATSKHDVYLMSQFSVTHWSSLTSTRSEVLNVSGH 172
SFY+FQ N+R VKSTI HFQLRNL+WATSKHDVYLM +SV HWSSL EVLNV+
Sbjct: 125 SFYDFQFNTRLVKSTIAHFQLRNLLWATSKHDVYLMQNYSVMHWSSLLQRGKEVLNVAKP 184
Query: 173 VAPSEKHPGSLLEGFTHTQVSTLAVKEKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDN 232
V P+ KH G L + Q+ST+AVKE L+VAGGF GEL+CK+L+ GV+FCS+ T DD+
Sbjct: 185 VIPTLKHCG-LAHPVSRVQISTMAVKENLMVAGGFHGELLCKNLNHSGVAFCSKITTDDS 243
Query: 233 AITNALEIYASPSGAVHFTASNNDSVVRDFDMEKFQLSKHFRFPWPVNHTSLSPNGKLLL 292
AITNA++++ +PSG++ A+NNDS VR FD E F F++ W VN+ S+SP+GKLL
Sbjct: 244 AITNAVDVFRNPSGSLRVIAANNDSQVRVFDAENFASLGCFKYDWSVNNASVSPDGKLLA 303
Query: 293 IVGDNPESMLVDSQTGKTIISLCGHLDFSFASAWHPDGMTFATGNQDKTCRIWDMRNLSK 352
++GD+ E ++ D+ TGK +L GHLD+SF+SAWHP+G ATGNQD TCR+WD+RNLS+
Sbjct: 304 VLGDSTEGLIADANTGKVTGNLKGHLDYSFSSAWHPNGQILATGNQDTTCRLWDIRNLSE 363
Query: 353 SVAVLKGNLGAIRSIRYTSDGQYLAMAEPADFVHVYDVKSGYEREQEIDFFGEISGISFS 412
S+AVLKG +GAIRS+++TSDG++LAMAEPADFVH++D SGY + QEID FGEI+G+SFS
Sbjct: 364 SIAVLKGRMGAIRSLKFTSDGKFLAMAEPADFVHIFDSHSGYVQSQEIDIFGEIAGLSFS 423
Query: 413 PDTESLFIGVWDRTYGSLLEYGRRQNYSYLDSMI 446
PDTE+LF+GV DRTYGSLLE+ R+ Y YLDSMI
Sbjct: 424 PDTEALFVGVADRTYGSLLEFTRKHYYQYLDSMI 457
>Medtr3g074070.4 | transducin/WD40 repeat protein | HC |
chr3:33432729-33438185 | 20130731
Length = 485
Score = 514 bits (1323), Expect = e-146, Method: Compositional matrix adjust.
Identities = 239/394 (60%), Positives = 309/394 (78%), Gaps = 1/394 (0%)
Query: 53 DTTAAHARRGQDIQGIPWDSLSITRERYRQTRLEQYKNYENIPHSGEKSGKDCINTKKGF 112
DT+A AR G+DIQGIPW+ L+ +R+ YR+TRL+QYKNYE + S E K+C+ +KG
Sbjct: 93 DTSAFEARNGKDIQGIPWEKLNYSRDEYRETRLKQYKNYECLTRSREDLDKECLEVEKGN 152
Query: 113 SFYEFQKNSRSVKSTILHFQLRNLVWATSKHDVYLMSQFSVTHWSSLTSTRSEVLNVSGH 172
SFY+FQ N+R VKSTI HFQLRNL+WATSKHDVYLM +SV HWSSL EVLNV+
Sbjct: 153 SFYDFQFNTRLVKSTIAHFQLRNLLWATSKHDVYLMQNYSVMHWSSLLQRGKEVLNVAKP 212
Query: 173 VAPSEKHPGSLLEGFTHTQVSTLAVKEKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDN 232
V P+ KH G L + Q+ST+AVKE L+VAGGF GEL+CK+L+ GV+FCS+ T DD+
Sbjct: 213 VIPTLKHCG-LAHPVSRVQISTMAVKENLMVAGGFHGELLCKNLNHSGVAFCSKITTDDS 271
Query: 233 AITNALEIYASPSGAVHFTASNNDSVVRDFDMEKFQLSKHFRFPWPVNHTSLSPNGKLLL 292
AITNA++++ +PSG++ A+NNDS VR FD E F F++ W VN+ S+SP+GKLL
Sbjct: 272 AITNAVDVFRNPSGSLRVIAANNDSQVRVFDAENFASLGCFKYDWSVNNASVSPDGKLLA 331
Query: 293 IVGDNPESMLVDSQTGKTIISLCGHLDFSFASAWHPDGMTFATGNQDKTCRIWDMRNLSK 352
++GD+ E ++ D+ TGK +L GHLD+SF+SAWHP+G ATGNQD TCR+WD+RNLS+
Sbjct: 332 VLGDSTEGLIADANTGKVTGNLKGHLDYSFSSAWHPNGQILATGNQDTTCRLWDIRNLSE 391
Query: 353 SVAVLKGNLGAIRSIRYTSDGQYLAMAEPADFVHVYDVKSGYEREQEIDFFGEISGISFS 412
S+AVLKG +GAIRS+++TSDG++LAMAEPADFVH++D SGY + QEID FGEI+G+SFS
Sbjct: 392 SIAVLKGRMGAIRSLKFTSDGKFLAMAEPADFVHIFDSHSGYVQSQEIDIFGEIAGLSFS 451
Query: 413 PDTESLFIGVWDRTYGSLLEYGRRQNYSYLDSMI 446
PDTE+LF+GV DRTYGSLLE+ R+ Y YLDSMI
Sbjct: 452 PDTEALFVGVADRTYGSLLEFTRKHYYQYLDSMI 485
>Medtr3g074070.1 | transducin/WD40 repeat protein | HC |
chr3:33432745-33438182 | 20130731
Length = 458
Score = 513 bits (1320), Expect = e-145, Method: Compositional matrix adjust.
Identities = 239/395 (60%), Positives = 310/395 (78%), Gaps = 2/395 (0%)
Query: 53 DTTAAHARRGQDIQGIPWDSLSITRERYRQTRLEQYKNYENIPHSGEKSGKDCINTKKGF 112
DT+A AR G+DIQGIPW+ L+ +R+ YR+TRL+QYKNYE + S E K+C+ +KG
Sbjct: 65 DTSAFEARNGKDIQGIPWEKLNYSRDEYRETRLKQYKNYECLTRSREDLDKECLEVEKGN 124
Query: 113 SFYEFQKNSRSVKSTILHFQLRNLVWATSKHDVYLMSQFSVTHWSSLTSTRSEVLNVSGH 172
SFY+FQ N+R VKSTI HFQLRNL+WATSKHDVYLM +SV HWSSL EVLNV+
Sbjct: 125 SFYDFQFNTRLVKSTIAHFQLRNLLWATSKHDVYLMQNYSVMHWSSLLQRGKEVLNVAKP 184
Query: 173 VAPS-EKHPGSLLEGFTHTQVSTLAVKEKLLVAGGFQGELICKHLDRPGVSFCSRTTYDD 231
V P+ +KH G L + Q+ST+AVKE L+VAGGF GEL+CK+L+ GV+FCS+ T DD
Sbjct: 185 VIPTLQKHCG-LAHPVSRVQISTMAVKENLMVAGGFHGELLCKNLNHSGVAFCSKITTDD 243
Query: 232 NAITNALEIYASPSGAVHFTASNNDSVVRDFDMEKFQLSKHFRFPWPVNHTSLSPNGKLL 291
+AITNA++++ +PSG++ A+NNDS VR FD E F F++ W VN+ S+SP+GKLL
Sbjct: 244 SAITNAVDVFRNPSGSLRVIAANNDSQVRVFDAENFASLGCFKYDWSVNNASVSPDGKLL 303
Query: 292 LIVGDNPESMLVDSQTGKTIISLCGHLDFSFASAWHPDGMTFATGNQDKTCRIWDMRNLS 351
++GD+ E ++ D+ TGK +L GHLD+SF+SAWHP+G ATGNQD TCR+WD+RNLS
Sbjct: 304 AVLGDSTEGLIADANTGKVTGNLKGHLDYSFSSAWHPNGQILATGNQDTTCRLWDIRNLS 363
Query: 352 KSVAVLKGNLGAIRSIRYTSDGQYLAMAEPADFVHVYDVKSGYEREQEIDFFGEISGISF 411
+S+AVLKG +GAIRS+++TSDG++LAMAEPADFVH++D SGY + QEID FGEI+G+SF
Sbjct: 364 ESIAVLKGRMGAIRSLKFTSDGKFLAMAEPADFVHIFDSHSGYVQSQEIDIFGEIAGLSF 423
Query: 412 SPDTESLFIGVWDRTYGSLLEYGRRQNYSYLDSMI 446
SPDTE+LF+GV DRTYGSLLE+ R+ Y YLDSMI
Sbjct: 424 SPDTEALFVGVADRTYGSLLEFTRKHYYQYLDSMI 458
>Medtr3g074070.3 | transducin/WD40 repeat protein | HC |
chr3:33432739-33438185 | 20130731
Length = 343
Score = 418 bits (1075), Expect = e-117, Method: Compositional matrix adjust.
Identities = 193/317 (60%), Positives = 250/317 (78%), Gaps = 1/317 (0%)
Query: 130 HFQLRNLVWATSKHDVYLMSQFSVTHWSSLTSTRSEVLNVSGHVAPSEKHPGSLLEGFTH 189
+F LRNL+WATSKHDVYLM +SV HWSSL EVLNV+ V P+ KH G L +
Sbjct: 28 NFMLRNLLWATSKHDVYLMQNYSVMHWSSLLQRGKEVLNVAKPVIPTLKHCG-LAHPVSR 86
Query: 190 TQVSTLAVKEKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNALEIYASPSGAVH 249
Q+ST+AVKE L+VAGGF GEL+CK+L+ GV+FCS+ T DD+AITNA++++ +PSG++
Sbjct: 87 VQISTMAVKENLMVAGGFHGELLCKNLNHSGVAFCSKITTDDSAITNAVDVFRNPSGSLR 146
Query: 250 FTASNNDSVVRDFDMEKFQLSKHFRFPWPVNHTSLSPNGKLLLIVGDNPESMLVDSQTGK 309
A+NNDS VR FD E F F++ W VN+ S+SP+GKLL ++GD+ E ++ D+ TGK
Sbjct: 147 VIAANNDSQVRVFDAENFASLGCFKYDWSVNNASVSPDGKLLAVLGDSTEGLIADANTGK 206
Query: 310 TIISLCGHLDFSFASAWHPDGMTFATGNQDKTCRIWDMRNLSKSVAVLKGNLGAIRSIRY 369
+L GHLD+SF+SAWHP+G ATGNQD TCR+WD+RNLS+S+AVLKG +GAIRS+++
Sbjct: 207 VTGNLKGHLDYSFSSAWHPNGQILATGNQDTTCRLWDIRNLSESIAVLKGRMGAIRSLKF 266
Query: 370 TSDGQYLAMAEPADFVHVYDVKSGYEREQEIDFFGEISGISFSPDTESLFIGVWDRTYGS 429
TSDG++LAMAEPADFVH++D SGY + QEID FGEI+G+SFSPDTE+LF+GV DRTYGS
Sbjct: 267 TSDGKFLAMAEPADFVHIFDSHSGYVQSQEIDIFGEIAGLSFSPDTEALFVGVADRTYGS 326
Query: 430 LLEYGRRQNYSYLDSMI 446
LLE+ R+ Y YLDSMI
Sbjct: 327 LLEFTRKHYYQYLDSMI 343
>Medtr3g010110.1 | transducin/WD40 repeat protein | HC |
chr3:2304865-2300946 | 20130731
Length = 295
Score = 390 bits (1001), Expect = e-108, Method: Compositional matrix adjust.
Identities = 187/254 (73%), Positives = 207/254 (81%), Gaps = 21/254 (8%)
Query: 50 KVVDTTAAHARRGQDIQGIPWDSLSITRERYRQTRLEQYKNYENIPHSGEKSGKDCINTK 109
K +DTTA ARRG+DIQ IPWD L++TRE YR +TK
Sbjct: 51 KALDTTADQARRGKDIQAIPWDKLNVTRESYRDFNK---------------------STK 89
Query: 110 KGFSFYEFQKNSRSVKSTILHFQLRNLVWATSKHDVYLMSQFSVTHWSSLTSTRSEVLNV 169
KG SFYEF++NSRSVK TILHFQLRNLVWATSKHD Y +SQFSV HWSSLT T SEVLNV
Sbjct: 90 KGNSFYEFRRNSRSVKPTILHFQLRNLVWATSKHDAYFLSQFSVMHWSSLTCTSSEVLNV 149
Query: 170 SGHVAPSEKHPGSLLEGFTHTQVSTLAVKEKLLVAGGFQGELICKHLDRPGVSFCSRTTY 229
SGHVAPSEKHPGS++EGFTHTQVSTLAVK+ LLV GGFQGELICKHLDRPGVSFCSRT
Sbjct: 150 SGHVAPSEKHPGSVVEGFTHTQVSTLAVKDNLLVIGGFQGELICKHLDRPGVSFCSRTAN 209
Query: 230 DDNAITNALEIYASPSGAVHFTASNNDSVVRDFDMEKFQLSKHFRFPWPVNHTSLSPNGK 289
DDN ITNA+EIYA+PSGAVHFT ++ND +R+FDMEKFQLSKHF FPWPVNHTS+SP+GK
Sbjct: 210 DDNGITNAIEIYATPSGAVHFTVASNDCAIRNFDMEKFQLSKHFCFPWPVNHTSMSPDGK 269
Query: 290 LLLIVGDNPESMLV 303
LLLIVGDNPES+LV
Sbjct: 270 LLLIVGDNPESILV 283
>Medtr3g074070.5 | transducin/WD40 repeat protein | HC |
chr3:33434654-33438185 | 20130731
Length = 298
Score = 385 bits (989), Expect = e-107, Method: Compositional matrix adjust.
Identities = 178/299 (59%), Positives = 233/299 (77%), Gaps = 1/299 (0%)
Query: 148 MSQFSVTHWSSLTSTRSEVLNVSGHVAPSEKHPGSLLEGFTHTQVSTLAVKEKLLVAGGF 207
M +SV HWSSL EVLNV+ V P+ KH G L + Q+ST+AVKE L+VAGGF
Sbjct: 1 MQNYSVMHWSSLLQRGKEVLNVAKPVIPTLKHCG-LAHPVSRVQISTMAVKENLMVAGGF 59
Query: 208 QGELICKHLDRPGVSFCSRTTYDDNAITNALEIYASPSGAVHFTASNNDSVVRDFDMEKF 267
GEL+CK+L+ GV+FCS+ T DD+AITNA++++ +PSG++ A+NNDS VR FD E F
Sbjct: 60 HGELLCKNLNHSGVAFCSKITTDDSAITNAVDVFRNPSGSLRVIAANNDSQVRVFDAENF 119
Query: 268 QLSKHFRFPWPVNHTSLSPNGKLLLIVGDNPESMLVDSQTGKTIISLCGHLDFSFASAWH 327
F++ W VN+ S+SP+GKLL ++GD+ E ++ D+ TGK +L GHLD+SF+SAWH
Sbjct: 120 ASLGCFKYDWSVNNASVSPDGKLLAVLGDSTEGLIADANTGKVTGNLKGHLDYSFSSAWH 179
Query: 328 PDGMTFATGNQDKTCRIWDMRNLSKSVAVLKGNLGAIRSIRYTSDGQYLAMAEPADFVHV 387
P+G ATGNQD TCR+WD+RNLS+S+AVLKG +GAIRS+++TSDG++LAMAEPADFVH+
Sbjct: 180 PNGQILATGNQDTTCRLWDIRNLSESIAVLKGRMGAIRSLKFTSDGKFLAMAEPADFVHI 239
Query: 388 YDVKSGYEREQEIDFFGEISGISFSPDTESLFIGVWDRTYGSLLEYGRRQNYSYLDSMI 446
+D SGY + QEID FGEI+G+SFSPDTE+LF+GV DRTYGSLLE+ R+ Y YLDSMI
Sbjct: 240 FDSHSGYVQSQEIDIFGEIAGLSFSPDTEALFVGVADRTYGSLLEFTRKHYYQYLDSMI 298
>Medtr3g074070.6 | transducin/WD40 repeat protein | HC |
chr3:33434654-33438185 | 20130731
Length = 298
Score = 385 bits (989), Expect = e-107, Method: Compositional matrix adjust.
Identities = 178/299 (59%), Positives = 233/299 (77%), Gaps = 1/299 (0%)
Query: 148 MSQFSVTHWSSLTSTRSEVLNVSGHVAPSEKHPGSLLEGFTHTQVSTLAVKEKLLVAGGF 207
M +SV HWSSL EVLNV+ V P+ KH G L + Q+ST+AVKE L+VAGGF
Sbjct: 1 MQNYSVMHWSSLLQRGKEVLNVAKPVIPTLKHCG-LAHPVSRVQISTMAVKENLMVAGGF 59
Query: 208 QGELICKHLDRPGVSFCSRTTYDDNAITNALEIYASPSGAVHFTASNNDSVVRDFDMEKF 267
GEL+CK+L+ GV+FCS+ T DD+AITNA++++ +PSG++ A+NNDS VR FD E F
Sbjct: 60 HGELLCKNLNHSGVAFCSKITTDDSAITNAVDVFRNPSGSLRVIAANNDSQVRVFDAENF 119
Query: 268 QLSKHFRFPWPVNHTSLSPNGKLLLIVGDNPESMLVDSQTGKTIISLCGHLDFSFASAWH 327
F++ W VN+ S+SP+GKLL ++GD+ E ++ D+ TGK +L GHLD+SF+SAWH
Sbjct: 120 ASLGCFKYDWSVNNASVSPDGKLLAVLGDSTEGLIADANTGKVTGNLKGHLDYSFSSAWH 179
Query: 328 PDGMTFATGNQDKTCRIWDMRNLSKSVAVLKGNLGAIRSIRYTSDGQYLAMAEPADFVHV 387
P+G ATGNQD TCR+WD+RNLS+S+AVLKG +GAIRS+++TSDG++LAMAEPADFVH+
Sbjct: 180 PNGQILATGNQDTTCRLWDIRNLSESIAVLKGRMGAIRSLKFTSDGKFLAMAEPADFVHI 239
Query: 388 YDVKSGYEREQEIDFFGEISGISFSPDTESLFIGVWDRTYGSLLEYGRRQNYSYLDSMI 446
+D SGY + QEID FGEI+G+SFSPDTE+LF+GV DRTYGSLLE+ R+ Y YLDSMI
Sbjct: 240 FDSHSGYVQSQEIDIFGEIAGLSFSPDTEALFVGVADRTYGSLLEFTRKHYYQYLDSMI 298
>Medtr4g119620.1 | transducin/WD40 repeat protein | HC |
chr4:49575751-49578750 | 20130731
Length = 326
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 86/177 (48%), Gaps = 8/177 (4%)
Query: 250 FTASNNDSVVRDFD-MEKFQLSKHFRFPWPVNHTSLSPNGKLLLIVGDNPESMLVDSQTG 308
FT S++DS M++++ +H V+ + S + + L+ D+ L D TG
Sbjct: 56 FTNSDSDSNSLTLSPMQQYEGHQH-----GVSDLAFSSDSRYLVSASDDKTIRLWDVPTG 110
Query: 309 KTIISLCGHLDFSFASAWHPDGMTFATGNQDKTCRIWDMRNLSKSVAVLKGNLGAIRSIR 368
+ +L GH ++ F ++P +G+ D+T R+WD+++ K + VL + + ++
Sbjct: 111 SLVKTLHGHTNYVFCVNFNPQSNVIVSGSFDETVRVWDVKS-GKCLKVLPAHSDPVTAVD 169
Query: 369 YTSDGQYLAMAEPADFVHVYDVKSGYEREQEIDFFG-EISGISFSPDTESLFIGVWD 424
+ DG + + ++D +G+ + ID +S + FSP+ + + +G D
Sbjct: 170 FNRDGTLIVSSSYDGLCRIWDASTGHCIKTLIDDENPPVSYVKFSPNAKFILVGTLD 226
>Medtr4g088640.1 | WD40 domain protein | LC | chr4:35254776-35252626
| 20130731
Length = 383
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 74/149 (49%), Gaps = 5/149 (3%)
Query: 284 LSPNGKLLLIVGDNPESMLVDSQTGKTIISLCGHLDFSFASAWHPDGMTFATGNQDKTCR 343
LS +GK++ G + + +TG ++ +L HLD F + P FAT + DKT +
Sbjct: 115 LSSDGKIVASGGIGKKPFICYLETGLSVTALESHLDTIFEVRFQPGSTVFATSSADKTVK 174
Query: 344 IWDMRNLSKSVAVLKGNLGAIRSIRYTSDGQYLAMAEPADFVHVYDVKSGYEREQEIDFF 403
+WD + +S + G+ G +RS+ + G L ++ D + V+D+ + ++ F
Sbjct: 175 LWDANSPERSFCNVVGHNGTVRSLDFHPLGGVLCTSDTCDVIKVWDL----HKNVLVNEF 230
Query: 404 GEISGISFSPDTESLFIGVWDRTYGSLLE 432
S + F P + L + V +R ++++
Sbjct: 231 KAGSLVRFQPGSGKL-LAVANRNVITIID 258
>Medtr6g004040.1 | katanin p80 WD40 repeat subunit B1-like protein |
HC | chr6:91770-77124 | 20130731
Length = 760
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 1/125 (0%)
Query: 302 LVDSQTGKTIISLCGHLDFSFASAWHPDGMTFATGNQDKTCRIWDMRNLSKSVAVLKGNL 361
L D + K + +L GH + +HP G FA+G+ D +IWD+R + KG+
Sbjct: 85 LWDLEEAKIVRTLTGHRSNCTSVDFHPFGEFFASGSLDTNLKIWDIRK-KGCIHTYKGHT 143
Query: 362 GAIRSIRYTSDGQYLAMAEPADFVHVYDVKSGYEREQEIDFFGEISGISFSPDTESLFIG 421
+ +IR+T DG+++ + V ++D+ +G G+I I F P L G
Sbjct: 144 RGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKSHEGQIQCIDFHPSEFLLATG 203
Query: 422 VWDRT 426
DRT
Sbjct: 204 SADRT 208
>Medtr5g022690.1 | U4/U6 small nuclear ribonucleoprotein PRP4 | HC |
chr5:8972619-8969829 | 20130731
Length = 488
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
Query: 286 PNGKLLLIVGDNPESMLVDSQTGKTIISLCGHLDFSFASAWHPDGMTFATGNQDKTCRIW 345
P+GK L D+ L D +TG+ ++ GH ++ A+H DG A+ +D R+W
Sbjct: 289 PSGKYLGTASDDKTWRLWDVETGEELLLQEGHSREVYSLAFHHDGSLAASCGKDALARVW 348
Query: 346 DMRNLSKSVAVLKGNLGAIRSIRYTSDGQYLAMAEPADFVHVYDVKSGYEREQEIDFFGE 405
D+R +S+ L+G++ IR I ++ +G +LA + ++D++
Sbjct: 349 DLRT-KRSLLALEGHVKPIRGISFSPNGYHLATGGEDNTCRIWDLRKNKSLYTIAAHSKL 407
Query: 406 ISGISFSP 413
IS + F P
Sbjct: 408 ISQVKFEP 415
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 9/146 (6%)
Query: 244 PSGAVHFTASNNDSVVRDFDMEKFQ----LSKHFRFPWPVNHTSLSPNGKLLLIVGDNPE 299
PSG TAS+ D R +D+E + H R V + +G L G +
Sbjct: 289 PSGKYLGTASD-DKTWRLWDVETGEELLLQEGHSR---EVYSLAFHHDGSLAASCGKDAL 344
Query: 300 SMLVDSQTGKTIISLCGHLDFSFASAWHPDGMTFATGNQDKTCRIWDMRNLSKSVAVLKG 359
+ + D +T +++++L GH+ ++ P+G ATG +D TCRIWD+R +KS+ +
Sbjct: 345 ARVWDLRTKRSLLALEGHVKPIRGISFSPNGYHLATGGEDNTCRIWDLRK-NKSLYTIAA 403
Query: 360 NLGAIRSIRYTSDGQYLAMAEPADFV 385
+ I +++ Y + +D
Sbjct: 404 HSKLISQVKFEPQEGYFLVTTSSDMT 429
>Medtr4g125710.1 | transducin/WD-like repeat-protein | HC |
chr4:52171409-52168341 | 20130731
Length = 321
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 92/211 (43%), Gaps = 34/211 (16%)
Query: 240 IYASPSGAVHFTASNNDSVVRDFDMEKFQLSKHFRFPWP--VNHTSLSPNGKLLLIVGDN 297
+ A P G++ +S+ DS VR FD++ P P V P G +L + G
Sbjct: 66 VAAHPLGSIA-ASSSLDSFVRVFDVDSNATIATLEAP-PSEVWQMRFDPKGAILAVAGGG 123
Query: 298 PESM-LVDSQTGKTIISLC-------------GHLDFSFASAWHPDGMTFATGNQDKTCR 343
S+ L D+ T + +++L G F + AW PDG A G+ D T
Sbjct: 124 SASVNLWDTSTWELVVTLSIPRVEGPKPSDKSGSKKFVLSVAWSPDGKRLACGSMDGTIS 183
Query: 344 IWDMRNLSKSVAVLKGNLGAIRSIRYTS-DGQYLAMAEPADFVHVYDVKSGYEREQEIDF 402
++D++ +K + L+G+ +RS+ Y+ D + L A VH+YD +
Sbjct: 184 VFDVQR-AKFLHHLEGHFMPVRSLVYSPYDPRLLFSASDDGNVHMYDAEGKA-------L 235
Query: 403 FGEISG-------ISFSPDTESLFIGVWDRT 426
G +SG + SPD ++ G DRT
Sbjct: 236 VGTMSGHASWVLCVDVSPDGAAIATGSSDRT 266
>Medtr5g016350.2 | transducin family protein/WD-40 repeat protein |
HC | chr5:5861710-5850637 | 20130731
Length = 519
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 78/162 (48%), Gaps = 13/162 (8%)
Query: 240 IYASPSGAVHFTASNNDSVVRDFDMEKFQLSKHFR--------FPW-PVNHTSLSPNGKL 290
I P+G++ + ++D+ + + M++ + FR W P + +PN KL
Sbjct: 360 IKWDPTGSL-LASCSDDNTAKIWSMKQDKYIHDFREHSKEVYTIRWSPTGPGTNNPNKKL 418
Query: 291 LLIVGDNPESM-LVDSQTGKTIISLCGHLDFSFASAWHPDGMTFATGNQDKTCRIWDMRN 349
+L ++ L D++ GK I SL GH D ++ A+ P+G A+G+ DK+ IW + N
Sbjct: 419 VLASASFDSTVKLWDAELGKLIYSLSGHRDGVYSVAFSPNGEYLASGSPDKSINIWSL-N 477
Query: 350 LSKSVAVLKGNLGAIRSIRYTSDGQYLAMAEPADFVHVYDVK 391
K + GN G I + + +G +A + V V D +
Sbjct: 478 DGKIIKTYNGN-GGIFEVCWNKEGDKIAACFSNNTVCVLDFR 518
>Medtr5g016350.1 | transducin family protein/WD-40 repeat protein |
HC | chr5:5861710-5850637 | 20130731
Length = 583
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 78/162 (48%), Gaps = 13/162 (8%)
Query: 240 IYASPSGAVHFTASNNDSVVRDFDMEKFQLSKHFR--------FPW-PVNHTSLSPNGKL 290
I P+G++ + ++D+ + + M++ + FR W P + +PN KL
Sbjct: 424 IKWDPTGSL-LASCSDDNTAKIWSMKQDKYIHDFREHSKEVYTIRWSPTGPGTNNPNKKL 482
Query: 291 LLIVGDNPESM-LVDSQTGKTIISLCGHLDFSFASAWHPDGMTFATGNQDKTCRIWDMRN 349
+L ++ L D++ GK I SL GH D ++ A+ P+G A+G+ DK+ IW + N
Sbjct: 483 VLASASFDSTVKLWDAELGKLIYSLSGHRDGVYSVAFSPNGEYLASGSPDKSINIWSL-N 541
Query: 350 LSKSVAVLKGNLGAIRSIRYTSDGQYLAMAEPADFVHVYDVK 391
K + GN G I + + +G +A + V V D +
Sbjct: 542 DGKIIKTYNGN-GGIFEVCWNKEGDKIAACFSNNTVCVLDFR 582
>Medtr2g012630.1 | katanin p80 WD40 repeat subunit B1-like protein |
HC | chr2:3190941-3179834 | 20130731
Length = 1111
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 72/142 (50%), Gaps = 4/142 (2%)
Query: 287 NGKLLLIVGDNPESM-LVDSQTGKTIISLCGHLDFSFASAWHPDGMTFATGNQDKTCRIW 345
+G++L++ G + L D + K + ++ GH + +HP G FA+G+ D +IW
Sbjct: 68 SGEVLVLAGSTSGVIRLWDLEESKMVRTVAGHRSNCTSVEFHPFGEFFASGSMDTNLKIW 127
Query: 346 DMRNLSKSVAVLKGNLGAIRSIRYTSDGQYLAMAEPADFVHVYDVKSGYEREQEIDFF-G 404
D R + KG+ I +I++T DG+++ + V V+D+ +G + + +F G
Sbjct: 128 DNRK-KGCIHTYKGHSQGISTIKFTPDGRWVVSGGFDNVVKVWDLTAG-KLLHDFNFHDG 185
Query: 405 EISGISFSPDTESLFIGVWDRT 426
I+ + F P L G DRT
Sbjct: 186 HITSLDFHPLEFLLATGSADRT 207
>Medtr2g012630.2 | katanin p80 WD40 repeat subunit B1-like protein |
HC | chr2:3190921-3179833 | 20130731
Length = 1030
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 71/141 (50%), Gaps = 4/141 (2%)
Query: 288 GKLLLIVGDNPESM-LVDSQTGKTIISLCGHLDFSFASAWHPDGMTFATGNQDKTCRIWD 346
G++L++ G + L D + K + ++ GH + +HP G FA+G+ D +IWD
Sbjct: 69 GEVLVLAGSTSGVIRLWDLEESKMVRTVAGHRSNCTSVEFHPFGEFFASGSMDTNLKIWD 128
Query: 347 MRNLSKSVAVLKGNLGAIRSIRYTSDGQYLAMAEPADFVHVYDVKSGYEREQEIDFF-GE 405
R + KG+ I +I++T DG+++ + V V+D+ +G + + +F G
Sbjct: 129 NRKKG-CIHTYKGHSQGISTIKFTPDGRWVVSGGFDNVVKVWDLTAG-KLLHDFNFHDGH 186
Query: 406 ISGISFSPDTESLFIGVWDRT 426
I+ + F P L G DRT
Sbjct: 187 ITSLDFHPLEFLLATGSADRT 207
>Medtr5g016370.1 | transducin family protein/WD-40 repeat protein |
HC | chr5:5874227-5866099 | 20130731
Length = 595
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 13/162 (8%)
Query: 240 IYASPSGAVHFTASNNDSVVRDFDMEKFQLSKHFR--------FPW-PVNHTSLSPNGKL 290
I P+G++ + ++D+ + + M++ + FR W P + +PN KL
Sbjct: 436 IKWDPTGSI-LASCSDDNTAKIWSMKQDKYIHDFREHSKEIYAIRWSPTGPGTNNPNKKL 494
Query: 291 LLIVGDNPESM-LVDSQTGKTIISLCGHLDFSFASAWHPDGMTFATGNQDKTCRIWDMRN 349
+L ++ L D++ GK I SL GH D + ++ P+G A+G+ DK+ IW + N
Sbjct: 495 VLASASCDSTVKLWDAELGKLIHSLNGHRDRVYTISFSPNGEYLASGSPDKSINIWSL-N 553
Query: 350 LSKSVAVLKGNLGAIRSIRYTSDGQYLAMAEPADFVHVYDVK 391
K + KGN G I + + +G +A + V + D +
Sbjct: 554 DGKIIKTYKGN-GGIFEVCWNKEGDKIAACFSNNTVCILDFR 594
>Medtr3g106080.1 | TBP-associated factor 5 | HC |
chr3:48932864-48942802 | 20130731
Length = 669
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 314 LCGHLDFSFASAWHPDGMTFATGNQDKTCRIWDMRNLSKSVAVLKGNLGAIRSIRYTSDG 373
+ GHL WH + ATG+ DKT R+WD+++ + V V G+ G I S+ + DG
Sbjct: 499 MAGHLSDVDCVQWHANCNYIATGSSDKTVRLWDVQS-GECVRVFVGHRGMILSLSMSPDG 557
Query: 374 QYLAMAEPADFVHVYDVKSG 393
+Y+A + + ++D+ SG
Sbjct: 558 RYMASGDEDGTIMMWDLSSG 577
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 73/158 (46%), Gaps = 9/158 (5%)
Query: 239 EIYASPSGAVHFTASNNDSVVRDFDMEKFQ----LSKHFRFPWPVNHTSLSPNGKLLLIV 294
++ SP G +F +S++D R + M++ Q ++ H V+ N +
Sbjct: 466 DVQFSPMGH-YFASSSHDRTARVWSMDRIQPLRIMAGHLS---DVDCVQWHANCNYIATG 521
Query: 295 GDNPESMLVDSQTGKTIISLCGHLDFSFASAWHPDGMTFATGNQDKTCRIWDMRNLSKSV 354
+ L D Q+G+ + GH + + PDG A+G++D T +WD+ + + V
Sbjct: 522 SSDKTVRLWDVQSGECVRVFVGHRGMILSLSMSPDGRYMASGDEDGTIMMWDLSS-GRCV 580
Query: 355 AVLKGNLGAIRSIRYTSDGQYLAMAEPADFVHVYDVKS 392
L G+ + S+ ++S+G LA V ++DV +
Sbjct: 581 TPLVGHTSCVWSLAFSSEGSILASGSADCTVKLWDVNT 618
>Medtr3g045130.1 | U4/U6 small nuclear ribonucleoprotein PRP4 | HC |
chr3:14589773-14591633 | 20130731
Length = 521
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 52/94 (55%), Gaps = 2/94 (2%)
Query: 287 NGKLLLIVGDNPESMLVDSQTGKTIISLCGHLDFSFASAWHPDGMTFATGNQDKTCRIWD 346
+G L G + + + D +TG+++++L GH+ ++ P+G ATG +D TCRIWD
Sbjct: 409 DGSLAASCGLDALARVWDLRTGRSVLALEGHVKSILGISFSPNGYHLATGGEDNTCRIWD 468
Query: 347 MRNLSKSVAVLKGNLGAIRSIRY-TSDGQYLAMA 379
+R KS+ + + I +++ +G +L A
Sbjct: 469 LRK-KKSLYTIPAHSNLISQVKFEPQEGYFLVTA 501
>Medtr3g045130.2 | U4/U6 small nuclear ribonucleoprotein PRP4 | HC |
chr3:14589773-14591633 | 20130731
Length = 521
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 52/94 (55%), Gaps = 2/94 (2%)
Query: 287 NGKLLLIVGDNPESMLVDSQTGKTIISLCGHLDFSFASAWHPDGMTFATGNQDKTCRIWD 346
+G L G + + + D +TG+++++L GH+ ++ P+G ATG +D TCRIWD
Sbjct: 409 DGSLAASCGLDALARVWDLRTGRSVLALEGHVKSILGISFSPNGYHLATGGEDNTCRIWD 468
Query: 347 MRNLSKSVAVLKGNLGAIRSIRY-TSDGQYLAMA 379
+R KS+ + + I +++ +G +L A
Sbjct: 469 LRK-KKSLYTIPAHSNLISQVKFEPQEGYFLVTA 501
>Medtr7g086360.1 | U5 small nuclear ribonucleoprotein 40 kDa-like
protein | HC | chr7:33509053-33512350 | 20130731
Length = 345
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 52/97 (53%)
Query: 311 IISLCGHLDFSFASAWHPDGMTFATGNQDKTCRIWDMRNLSKSVAVLKGNLGAIRSIRYT 370
I+ L GH + ++P G A+G+ DK +W++ K+ VLKG+ A+ + +T
Sbjct: 48 IMLLTGHQSAVYTMKFNPTGSVVASGSHDKEIFLWNVHGDCKNFMVLKGHKNAVLDLHWT 107
Query: 371 SDGQYLAMAEPADFVHVYDVKSGYEREQEIDFFGEIS 407
SDG + A P + ++D ++G + ++ ++ ++
Sbjct: 108 SDGTQIISASPDKTLRLWDTETGKQIKKMVEHLSYVN 144
>Medtr1g044720.1 | Pre-mRNA-processing factor | HC |
chr1:16888450-16897958 | 20130731
Length = 519
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 323 ASAWHPDGMTFATGNQDKTCRIWDMRNLSKSVAVLKGNLGAIRSIRYTSDGQYLAMAEPA 382
++A+HPDG+ TG D +IWD+++ + +VA G++G + +I ++ +G YLA A
Sbjct: 356 SAAFHPDGLILGTGTTDSLVKIWDVKSQA-NVAKFDGHVGHVTAISFSENGYYLATAA-H 413
Query: 383 DFVHVYDVK 391
D V ++D++
Sbjct: 414 DGVKLWDLR 422
>Medtr1g072140.1 | transducin/WD40 repeat protein | HC |
chr1:32005480-32003360 | 20130731
Length = 316
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 67/149 (44%), Gaps = 2/149 (1%)
Query: 279 VNHTSLSPNGKLLLIVGDNPESMLVDSQTGKTIISLCGHLDFSFASAWHPDGMTFATGNQ 338
+N + S + + D+ + D+ TG + +L GH F ++P +G+
Sbjct: 72 INDIAWSSDSHYICSASDDKTLRIWDANTGDCVKTLRGHGHNVFCVNFNPQSNYIVSGSF 131
Query: 339 DKTCRIWDMRNLSKSVAVLKGNLGAIRSIRYTSDGQYLAMAEPADFVHVYDVKSGYEREQ 398
D+T R+W+++ KSV V+K + + S+ + DG + ++D SG +
Sbjct: 132 DETVRVWEVKT-GKSVHVIKAHAMPVTSVDFNRDGSLIVSGSHDGSCKIWDTNSGALLKT 190
Query: 399 EI-DFFGEISGISFSPDTESLFIGVWDRT 426
I D +S FSP+ + + + + T
Sbjct: 191 LIDDKVPAVSFAKFSPNGKFILVATLNDT 219
>Medtr1g054300.1 | WD-40 repeat protein/notchless protein, putative
| HC | chr1:23359694-23368343 | 20130731
Length = 483
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Query: 279 VNHTSLSPNGKLLLIVGDNPESMLVDSQTGKTIISLCGHLDFSFASAWHPDGMTFATGNQ 338
VNH SP+G+ + + + + TGK + + GH+ + +W D +G++
Sbjct: 373 VNHVYFSPDGQWIASASFDKSVKIWNGTTGKFVTAFRGHVGPVYQISWSADSRLLLSGSK 432
Query: 339 DKTCRIWDMRNLSKSVAVLKGNLGAIRSIRYTSDGQYLA 377
D T ++WD+R K L G+ + S+ ++ DG+ +A
Sbjct: 433 DSTLKVWDIRT-RKLKQDLPGHADEVFSVDWSPDGEKVA 470