Miyakogusa Predicted Gene

Lj3g3v1931890.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1931890.2 Non Characterized Hit- tr|D7MF95|D7MF95_ARALL
Putative uncharacterized protein (Fragment)
OS=Arabido,33.49,3e-17,seg,NULL; coiled-coil,NULL,CUFF.43452.2
         (212 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g009740.1 | WPP domain interacting protein, putative | HC ...   245   2e-65
Medtr8g070940.1 | transmembrane protein, putative | HC | chr8:30...   112   4e-25

>Medtr3g009740.1 | WPP domain interacting protein, putative | HC |
           chr3:2139608-2143381 | 20130731
          Length = 575

 Score =  245 bits (626), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 135/218 (61%), Positives = 156/218 (71%), Gaps = 12/218 (5%)

Query: 2   EDPLIESIRSXXXXXXXXXXXXXKFKETGIEVVSPDDDLAKCSSASAGTIGVDIGLHNSC 61
           EDPLIESIRS             KF+E   EVVSP+DD AKCSSASAG   VD+G H S 
Sbjct: 312 EDPLIESIRSLQAVQEALEEEVQKFREIDTEVVSPEDDSAKCSSASAGITAVDLGFHKSF 371

Query: 62  VSAHSGAEEIKQTASSSLELQVLNLTQNISSLENKLKELQGMVALKDSRIVELETALSSG 121
           +S+HS A+E  Q+ASSSLE Q+ +L Q+++ LE+KL ELQG+++ KDSRIVELETALSSG
Sbjct: 372 LSSHSSADETNQSASSSLEFQISSLKQHVNLLESKLGELQGVLSSKDSRIVELETALSSG 431

Query: 122 KSPKEESASTIGLXXXXXXXXXXXXXGLFRQKIEAEIEYLAISKVMQNLKAGKDFQLTLL 181
           K PKEESA+T+G               LFRQK+EAE+EYLAI+KVMQNLK G D Q TLL
Sbjct: 432 KFPKEESANTLGYKEVEYEIED-----LFRQKVEAEVEYLAIAKVMQNLKVGADLQFTLL 486

Query: 182 EEQEKLSENQEQV-------EIKASALKNKAEELEKYC 212
           EEQEKLSENQ QV       E KAS LKNKAEELEKYC
Sbjct: 487 EEQEKLSENQAQVLNKIIDAESKASVLKNKAEELEKYC 524


>Medtr8g070940.1 | transmembrane protein, putative | HC |
           chr8:30072686-30075038 | 20130731
          Length = 349

 Score =  112 bits (279), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 83/219 (37%), Positives = 119/219 (54%), Gaps = 23/219 (10%)

Query: 1   MEDPLIESIRSXXXXXXXXXXXXXKFKETGIEVVSPDDDLA-KCSSASAGTIGVDIGLHN 59
           ++DPL++SI +             KFKE G E  S DD+ + KC S +AG   VD+  H+
Sbjct: 94  VDDPLLKSIHNLKLSRDALEQEIEKFKEIGNESSSHDDNGSIKCRSEAAGPSAVDLEFHD 153

Query: 60  SCVSAHSGAEEIKQTASSSLELQVLNLTQNISSLENKLKELQGMVALKDSRIVELETALS 119
           SC S HS     +Q +SSS ELQ+ +LT+ I  LENKL  L+  +  +D RI+ LE+ L 
Sbjct: 154 SCSSGHSD----EQNSSSSRELQIASLTEKIDILENKLYRLKCDLEQRDGRILILESDLY 209

Query: 120 SGKSPKEESASTIGLXXXXXXXXXXXXXGLFRQKIEAEIEYLAISKVMQNLKAGKDFQLT 179
           +    KEES STIG               LF QK+EAE++YL I  +M++LK       T
Sbjct: 210 T----KEESTSTIG---EKCKELESELESLFLQKVEAEVKYLTIKNMMKSLKVAS----T 258

Query: 180 LLEEQEKLS----ENQEQVEIKASA---LKNKAEELEKY 211
             E+QE +S    +N  ++E+  S    +KN+ +E  KY
Sbjct: 259 FTEKQETMSGNKVQNTNKLEVAGSEDSIMKNRTDESGKY 297