Miyakogusa Predicted Gene

Lj3g3v1931890.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1931890.1 Non Characterized Hit- tr|B9T0J3|B9T0J3_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,41.06,2e-18,seg,NULL,CUFF.43452.1
         (407 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g009740.1 | WPP domain interacting protein, putative | HC ...   414   e-116
Medtr8g070940.1 | transmembrane protein, putative | HC | chr8:30...    54   2e-07

>Medtr3g009740.1 | WPP domain interacting protein, putative | HC |
           chr3:2139608-2143381 | 20130731
          Length = 575

 Score =  414 bits (1065), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 248/410 (60%), Positives = 282/410 (68%), Gaps = 17/410 (4%)

Query: 1   MDLGTESVEENELNHDGDENGTRDGDSIGDENLGLGFDGNSGVSTDQKEEVVDEGSGDAS 60
           MDLG+ESVEENE+NHD  ENG +  D    E  G  FDGN GV  DQ+  V + GS +A 
Sbjct: 1   MDLGSESVEENEVNHD--ENGIKGCD----EKSGFQFDGNFGVKPDQEGIVAELGSEEAV 54

Query: 61  SSKGTPTKGFGLKKWKRIRRDVVKDPNSSA-ESGKVLLKRGLSGSGNVNLSENQPFSRDV 119
           +SKG P KG GLKKWKRIRR+VV+D NSSA ESGKVL KRGLSGSGNVNLSEN    R V
Sbjct: 55  NSKGAPRKGVGLKKWKRIRRNVVRDHNSSADESGKVL-KRGLSGSGNVNLSENL---RGV 110

Query: 120 KEKNDGSSNTFGNVVFPEGFAGRGSSSDSRYAVGSGFVVGTXXXXXXXXXXXXXTAASEP 179
           KEKNDGSS+ FGNVVF +G A RGSS+DSRYAVGSGFVVGT             TAASEP
Sbjct: 111 KEKNDGSSSAFGNVVFSDGHAIRGSSTDSRYAVGSGFVVGTDSENSEDRSSKSSTAASEP 170

Query: 180 KIRHDKSR-SKNTNSKNVGNTAQRVLQQGKGRIESSKNPGGGAGVRIEKXXXXXXXXXXX 238
           K+RH+K R S+NTNSKN+ N+AQ+V QQGKG IESS  PGGG  V+ EK           
Sbjct: 171 KVRHEKGRGSRNTNSKNLVNSAQKV-QQGKGWIESSAKPGGGGRVKFEKENSISSLDSDS 229

Query: 239 XXXXXXQGVFS-VTSNGKHNGRPFIYDGGNGSEALINEHLTEGVEASYGNENIGEDDDLL 297
                 Q VFS VTSNGKH+G P +YDG N  EA  NEH TE  EA YGNEN GED+DL 
Sbjct: 230 RSNYK-QAVFSTVTSNGKHSGNPHVYDGDNDGEANTNEHFTEEHEAGYGNEN-GEDEDL- 286

Query: 298 PENSVTNLSWGATEEKSVDNQSSNMEDPLIESIRSXXXXXXXXXXXXXKFKETGIEVVSP 357
            ENS  N SW A EEKS +NQS++ EDPLIESIRS             KF+E   EVVSP
Sbjct: 287 QENSAANQSWDAPEEKSENNQSTSAEDPLIESIRSLQAVQEALEEEVQKFREIDTEVVSP 346

Query: 358 DDDLAKCSSASAGTIGVDIGLHNSCVSAHSGAEEIKQTASSSLELQVLNL 407
           +DD AKCSSASAG   VD+G H S +S+HS A+E  Q+ASSSLE Q+ +L
Sbjct: 347 EDDSAKCSSASAGITAVDLGFHKSFLSSHSSADETNQSASSSLEFQISSL 396


>Medtr8g070940.1 | transmembrane protein, putative | HC |
           chr8:30072686-30075038 | 20130731
          Length = 349

 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/88 (39%), Positives = 49/88 (55%), Gaps = 5/88 (5%)

Query: 321 NMEDPLIESIRSXXXXXXXXXXXXXKFKETGIEVVSPDDD-LAKCSSASAGTIGVDIGLH 379
           +++DPL++SI +             KFKE G E  S DD+   KC S +AG   VD+  H
Sbjct: 93  DVDDPLLKSIHNLKLSRDALEQEIEKFKEIGNESSSHDDNGSIKCRSEAAGPSAVDLEFH 152

Query: 380 NSCVSAHSGAEEIKQTASSSLELQVLNL 407
           +SC S HS     +Q +SSS ELQ+ +L
Sbjct: 153 DSCSSGHSD----EQNSSSSRELQIASL 176