Miyakogusa Predicted Gene

Lj3g3v1876170.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1876170.3 Non Characterized Hit- tr|I3SLM9|I3SLM9_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,86.78,0,RESPONSE_REGULATORY,Signal transduction response
regulator, receiver domain; CheY-like,CheY-like sup,CUFF.43362.3
         (121 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g038620.1 | two-component response regulator ARR3-like pro...   169   4e-43
Medtr3g015490.1 | two-component response regulator ARR3-like pro...   153   4e-38
Medtr6g007460.1 | response regulator receiver domain protein | H...   152   5e-38
Medtr7g490310.2 | two-component response regulator ARR3-like pro...   148   1e-36
Medtr7g490310.1 | two-component response regulator ARR3-like pro...   148   1e-36
Medtr5g036480.1 | two-component response regulator ARR3-like pro...   111   1e-25
Medtr1g049100.1 | two-component response regulator ARR3-like pro...   110   3e-25
Medtr3g088630.1 | two-component response regulator ARR3-like pro...   109   4e-25
Medtr3g078613.1 | two-component response regulator ARR3-like pro...   108   8e-25
Medtr4g106590.1 | two-component response regulator ARR3-like pro...   106   6e-24
Medtr3g078613.2 | two-component response regulator ARR3-like pro...   104   2e-23
Medtr3g093860.1 | two-component response regulator ARR3-like pro...   102   1e-22

>Medtr8g038620.1 | two-component response regulator ARR3-like
           protein | HC | chr8:14326128-14324370 | 20130731
          Length = 177

 Score =  169 bits (429), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 94/129 (72%), Positives = 98/129 (75%), Gaps = 26/129 (20%)

Query: 1   MGMATPKETQFHVLAVDDSLIDRMLIERLLKTSSFHGGILIADILGMCVEFTVTAVDSAS 60
           MGMA   E QFHVLAVDDS+IDRMLIERLLKTSSF+                VT VDSAS
Sbjct: 1   MGMAA--ENQFHVLAVDDSIIDRMLIERLLKTSSFN----------------VTTVDSAS 42

Query: 61  KALNFLGLVED--------MASEIHQDVDVNLIITDYCMPGMTGYDLLRKIKESKSLKDI 112
           KAL FLGLVED        +ASEI+QDVDVNLIITDYCMPGMTGYDLLRKIKESKS KDI
Sbjct: 43  KALKFLGLVEDEMRTYDTHVASEINQDVDVNLIITDYCMPGMTGYDLLRKIKESKSFKDI 102

Query: 113 PVVIMSSEN 121
           PVVIMSSEN
Sbjct: 103 PVVIMSSEN 111


>Medtr3g015490.1 | two-component response regulator ARR3-like
           protein | HC | chr3:4491270-4492945 | 20130731
          Length = 164

 Score =  153 bits (386), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 84/121 (69%), Positives = 89/121 (73%), Gaps = 25/121 (20%)

Query: 10  QFHVLAVDDSLIDRMLIERLLKTSSFHGGILIADILGMCVEFTVTAVDSASKALNFLGLV 69
           QFHVLAVDDS+IDRMLIERLLKTSSFH                VT VDS +KAL FLGLV
Sbjct: 3   QFHVLAVDDSVIDRMLIERLLKTSSFH----------------VTVVDSGTKALKFLGLV 46

Query: 70  ED---------MASEIHQDVDVNLIITDYCMPGMTGYDLLRKIKESKSLKDIPVVIMSSE 120
           ED         +A+E  Q V+VNLIITDYCMPGMTGYDLLRKIKES SLKDIPVVIMSSE
Sbjct: 47  EDEVRNEKPHSIAAETDQVVEVNLIITDYCMPGMTGYDLLRKIKESNSLKDIPVVIMSSE 106

Query: 121 N 121
           N
Sbjct: 107 N 107


>Medtr6g007460.1 | response regulator receiver domain protein | HC |
           chr6:1613053-1614682 | 20130731
          Length = 207

 Score =  152 bits (385), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 87/161 (54%), Positives = 96/161 (59%), Gaps = 56/161 (34%)

Query: 1   MGMATPKETQFHVLAVDDSLIDRMLIERLLKTSSFHGGILIADILGMCVEFTVTAVDSAS 60
           MG++   ETQFHVLAVDDS+IDRMLIERLLKTSSFH                VT +DSAS
Sbjct: 1   MGISMAAETQFHVLAVDDSIIDRMLIERLLKTSSFH----------------VTTMDSAS 44

Query: 61  KALNFLGLVEDMASEIHQDVDVNLIITDYCMPGMTGYDLLRKIKESK------------- 107
           KAL FLGLVED+ASE+H DVDVNLII DYCMPGMTGYDLLRKIK ++             
Sbjct: 45  KALKFLGLVEDVASEVHGDVDVNLIIADYCMPGMTGYDLLRKIKGARKVNLGRLKLKIAT 104

Query: 108 ---------------------------SLKDIPVVIMSSEN 121
                                      + KDIPVVIMSSEN
Sbjct: 105 KSKLRRLGRVVFLGAKITTLGNLEGIQTFKDIPVVIMSSEN 145


>Medtr7g490310.2 | two-component response regulator ARR3-like
           protein | HC | chr7:35463772-35459164 | 20130731
          Length = 239

 Score =  148 bits (373), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 80/130 (61%), Positives = 91/130 (70%), Gaps = 27/130 (20%)

Query: 1   MGMATPKETQFHVLAVDDSLIDRMLIERLLKTSSFHGGILIADILGMCVEFTVTAVDSAS 60
           MGMA   E+QFHVLAVDDS+IDR LIERLLKTSS+                 VT VDS S
Sbjct: 1   MGMAA--ESQFHVLAVDDSIIDRKLIERLLKTSSYQ----------------VTTVDSGS 42

Query: 61  KALNFLGLVEDMASEI---------HQDVDVNLIITDYCMPGMTGYDLLRKIKESKSLKD 111
           KAL FLGL E+  +           HQ+V+VNL+ITDYCMPGMTGYDLL+KIKES SL++
Sbjct: 43  KALEFLGLCENDETNPNTPSVFPNNHQEVEVNLVITDYCMPGMTGYDLLKKIKESSSLRN 102

Query: 112 IPVVIMSSEN 121
           IPVVIMSSEN
Sbjct: 103 IPVVIMSSEN 112


>Medtr7g490310.1 | two-component response regulator ARR3-like
           protein | HC | chr7:35463772-35459164 | 20130731
          Length = 239

 Score =  148 bits (373), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 80/130 (61%), Positives = 91/130 (70%), Gaps = 27/130 (20%)

Query: 1   MGMATPKETQFHVLAVDDSLIDRMLIERLLKTSSFHGGILIADILGMCVEFTVTAVDSAS 60
           MGMA   E+QFHVLAVDDS+IDR LIERLLKTSS+                 VT VDS S
Sbjct: 1   MGMAA--ESQFHVLAVDDSIIDRKLIERLLKTSSYQ----------------VTTVDSGS 42

Query: 61  KALNFLGLVEDMASEI---------HQDVDVNLIITDYCMPGMTGYDLLRKIKESKSLKD 111
           KAL FLGL E+  +           HQ+V+VNL+ITDYCMPGMTGYDLL+KIKES SL++
Sbjct: 43  KALEFLGLCENDETNPNTPSVFPNNHQEVEVNLVITDYCMPGMTGYDLLKKIKESSSLRN 102

Query: 112 IPVVIMSSEN 121
           IPVVIMSSEN
Sbjct: 103 IPVVIMSSEN 112


>Medtr5g036480.1 | two-component response regulator ARR3-like
           protein | HC | chr5:15918294-15920037 | 20130731
          Length = 237

 Score =  111 bits (278), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 62/116 (53%), Positives = 77/116 (66%), Gaps = 20/116 (17%)

Query: 10  QFHVLAVDDSLIDRMLIERLLKTSSFHGGILIADILGMCVEFTVTAVDSASKALNFLGLV 69
           + HVLAVDDSL+DR +IERLLK S+                  VTAVDS  +AL FLGLV
Sbjct: 15  EVHVLAVDDSLVDRKVIERLLKISACK----------------VTAVDSGIRALQFLGLV 58

Query: 70  EDMASEIHQ----DVDVNLIITDYCMPGMTGYDLLRKIKESKSLKDIPVVIMSSEN 121
           ++  +         + V+L+ITDYCMPGMTGY+LL+KIKES + + IPVVIMSSEN
Sbjct: 59  DEKETSESDAFVPGLKVDLVITDYCMPGMTGYELLKKIKESTTFRAIPVVIMSSEN 114


>Medtr1g049100.1 | two-component response regulator ARR3-like
           protein | HC | chr1:18957861-18956301 | 20130731
          Length = 197

 Score =  110 bits (274), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 63/114 (55%), Positives = 75/114 (65%), Gaps = 18/114 (15%)

Query: 10  QFHVLAVDDSLIDRMLIERLLKTSSFHGGILIADILGMCVEFTVTAVDSASKALNFLGLV 69
           + HVLAVDDSLIDR +IERLLK S+                  VTAVDS  +AL FLGL 
Sbjct: 7   EVHVLAVDDSLIDRKVIERLLKISACK----------------VTAVDSGIRALQFLGLD 50

Query: 70  EDMASEIH--QDVDVNLIITDYCMPGMTGYDLLRKIKESKSLKDIPVVIMSSEN 121
           E   +       + V+L+ITDYCMP MTGY+LL+KIKES + K+IPVVIMSSEN
Sbjct: 51  EQRENSESDGSPLKVDLVITDYCMPEMTGYELLKKIKESSTFKEIPVVIMSSEN 104


>Medtr3g088630.1 | two-component response regulator ARR3-like
           protein | HC | chr3:40031137-40027258 | 20130731
          Length = 235

 Score =  109 bits (273), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 64/133 (48%), Positives = 84/133 (63%), Gaps = 35/133 (26%)

Query: 7   KETQFHVLAVDDSLIDRMLIERLLKTSSFHGGILIADILGMCVEFTVTAVDSASKALNFL 66
           K+  FHVLAVDDS+IDRML+ERLL+ SS             C    VT VDS  KAL +L
Sbjct: 18  KQEHFHVLAVDDSVIDRMLLERLLRDSS-------------C---KVTCVDSGDKALKYL 61

Query: 67  GL-VEDMAS-----------------EIHQDVDVNLIITDYCMPGMTGYDLLRKIKESKS 108
           GL +++++S                 ++ +   VNLI+TDYCMPGM+GYDLL+++K S S
Sbjct: 62  GLNIDEISSTKSSILESSSPSLPQPLQLQEGNKVNLIMTDYCMPGMSGYDLLKRVKGS-S 120

Query: 109 LKDIPVVIMSSEN 121
            KD+PVV+MSSEN
Sbjct: 121 WKDVPVVVMSSEN 133


>Medtr3g078613.1 | two-component response regulator ARR3-like
           protein | HC | chr3:35427921-35430565 | 20130731
          Length = 200

 Score =  108 bits (271), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 58/112 (51%), Positives = 74/112 (66%), Gaps = 16/112 (14%)

Query: 10  QFHVLAVDDSLIDRMLIERLLKTSSFHGGILIADILGMCVEFTVTAVDSASKALNFLGLV 69
           + HVLAVDDS +DR +IERLLK +S                  VT V+S ++AL +LGL 
Sbjct: 22  ELHVLAVDDSFVDRKVIERLLKFTSCK----------------VTVVESGTRALQYLGLD 65

Query: 70  EDMASEIHQDVDVNLIITDYCMPGMTGYDLLRKIKESKSLKDIPVVIMSSEN 121
            D +S     V VN+I+TDY MPGMTGY+LL+KIKES   ++IPVV+MSSEN
Sbjct: 66  GDTSSIGFDGVKVNMIMTDYSMPGMTGYELLKKIKESSVFREIPVVVMSSEN 117


>Medtr4g106590.1 | two-component response regulator ARR3-like
           protein | HC | chr4:44212854-44214908 | 20130731
          Length = 215

 Score =  106 bits (264), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 62/113 (54%), Positives = 74/113 (65%), Gaps = 17/113 (15%)

Query: 10  QFHVLAVDDSLIDRMLIERLLKTSSFHGGILIADILGMCVEFTVTAVDSASKALNFLGLV 69
           + HVLAVDDSL+DR +IERLLK SS                  VT V+SA +AL FLGL 
Sbjct: 25  ELHVLAVDDSLVDRKVIERLLKISSCK----------------VTVVESARRALQFLGLD 68

Query: 70  EDMASEIHQDVDVNLIITDYCMPGMTGYDLLRKIK-ESKSLKDIPVVIMSSEN 121
            + +      V VNLI+TDY MPGMTGY+LL+KIK ES   ++IPVVIMSSEN
Sbjct: 69  GENSDVAFDAVKVNLIMTDYSMPGMTGYELLKKIKQESSVFREIPVVIMSSEN 121


>Medtr3g078613.2 | two-component response regulator ARR3-like
           protein | HC | chr3:35427921-35430565 | 20130731
          Length = 201

 Score =  104 bits (259), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 58/113 (51%), Positives = 74/113 (65%), Gaps = 17/113 (15%)

Query: 10  QFHVLAVDDSLIDRMLIERLLKTSSFHGGILIADILGMCVEFTVTAVDSASKALNFLGLV 69
           + HVLAVDDS +DR +IERLLK +S                  VT V+S ++AL +LGL 
Sbjct: 22  ELHVLAVDDSFVDRKVIERLLKFTSCK----------------VTVVESGTRALQYLGLD 65

Query: 70  EDMASEIHQDVDVNLIITDYCMPGMTGYDLLRKIK-ESKSLKDIPVVIMSSEN 121
            D +S     V VN+I+TDY MPGMTGY+LL+KIK ES   ++IPVV+MSSEN
Sbjct: 66  GDTSSIGFDGVKVNMIMTDYSMPGMTGYELLKKIKQESSVFREIPVVVMSSEN 118


>Medtr3g093860.1 | two-component response regulator ARR3-like
           protein | HC | chr3:42884155-42883125 | 20130731
          Length = 156

 Score =  102 bits (253), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 58/113 (51%), Positives = 74/113 (65%), Gaps = 20/113 (17%)

Query: 12  HVLAVDDSLIDRMLIERLLKTSSFHGGILIADILGMCVEFTVTAVDSASKALNFLGLV-- 69
           HVLAVDD++IDR L+E+LLK SS                  VT  ++  KAL +LGL   
Sbjct: 19  HVLAVDDNIIDRTLVEKLLKNSSCK----------------VTTAENGLKALEYLGLASG 62

Query: 70  -EDMASEIHQDVDVNLIITDYCMPGMTGYDLLRKIKESKSLKDIPVVIMSSEN 121
            E   +  +    VNLIITDYCMPGMTGY+LL+KIK+S S+K++PVVIMSS+N
Sbjct: 63  AEQKNTLENGGPKVNLIITDYCMPGMTGYELLKKIKQS-SMKEVPVVIMSSDN 114