Miyakogusa Predicted Gene

Lj3g3v1739290.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1739290.2 tr|A8HT66|A8HT66_CHLRE Predicted protein
OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_187979 PE=4
SV=1,26.58,2e-18,seg,NULL; SUBFAMILY NOT NAMED,NULL;
ARSENITE-RESISTANCE PROTEIN 2,NULL; DUF3546,Protein of unknown
f,CUFF.43058.2
         (353 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g006760.1 | serrate RNA effector molecule-like protein | H...   521   e-148
Medtr3g006760.2 | serrate RNA effector molecule-like protein | H...   520   e-148
Medtr8g043980.1 | serrate RNA effector molecule-like protein | H...   517   e-147
Medtr2g084355.1 | serrate RNA effector molecule-like protein, pu...   223   2e-58

>Medtr3g006760.1 | serrate RNA effector molecule-like protein | HC |
           chr3:850770-843225 | 20130731
          Length = 704

 Score =  521 bits (1343), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 258/352 (73%), Positives = 286/352 (81%), Gaps = 1/352 (0%)

Query: 1   MSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRTYFNSHKDEEWLKDKYHPTNLLTV 60
           MSYKQFIQELEDDILP+EAERRYQEYKSEYI+TQKR YFN+HKD EWLKDKYHPTNLLTV
Sbjct: 180 MSYKQFIQELEDDILPSEAERRYQEYKSEYITTQKRAYFNTHKDAEWLKDKYHPTNLLTV 239

Query: 61  IERRNENARQLAKDFLLDLQSGTLDLNPGLXXXXXXXXXXXXEPNSDEEADNAGKRKRHG 120
           IERRNENAR+LAK+FLLDLQSGTLD+NPGL            EPNS+EE D  GKR+RHG
Sbjct: 240 IERRNENARRLAKEFLLDLQSGTLDINPGLNSASTKSEQAT-EPNSEEETDAGGKRRRHG 298

Query: 121 RGSNKENDFSAAPKAHSISLEPRRIQADIQQAQTLVRKLDIEKGIADNILCNSDLNKNDD 180
           RGSNK+NDFSAAPKAH +S EPRRIQ DI Q Q +VRKLD EKGI DNILC +D +KN D
Sbjct: 299 RGSNKDNDFSAAPKAHPVSSEPRRIQEDIHQVQAVVRKLDKEKGIEDNILCTNDHSKNSD 358

Query: 181 KTHRGSVGPIIILRGLSSVKGLEGVELLDTLITYLWRIHGVDYYGLIETIEAKGFRHVRP 240
           K   GSVGP++I+RGL+S+KGLEGVELLDTLITYLWRIHGVDYYG++ET +AKGFRHVRP
Sbjct: 359 KARSGSVGPVVIIRGLTSIKGLEGVELLDTLITYLWRIHGVDYYGMLETSDAKGFRHVRP 418

Query: 241 EGTTHXXXXXXXXXXXXXLDSFWQGRLNGQDPVEVMTXXXXXXXXXXXXLDPYIRKIRDE 300
           EG  H             LDSFWQ RL+G DP+EV T            LDPY+RKIRDE
Sbjct: 419 EGARHEETAKSGSEWEKKLDSFWQRRLDGLDPLEVRTAKEKIDAAAADMLDPYVRKIRDE 478

Query: 301 KYGWKYGCGAKGCTKLFHASEFVHKHLKLKHPELAVEQTTKVREDLYFQNYM 352
           KYGWKYGCGAK CTKLFHA EFV+KHLKLKHPEL +E T+K+REDLYFQNYM
Sbjct: 479 KYGWKYGCGAKSCTKLFHAVEFVYKHLKLKHPELVLELTSKLREDLYFQNYM 530


>Medtr3g006760.2 | serrate RNA effector molecule-like protein | HC |
           chr3:850762-844755 | 20130731
          Length = 591

 Score =  520 bits (1339), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 258/352 (73%), Positives = 286/352 (81%), Gaps = 1/352 (0%)

Query: 1   MSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRTYFNSHKDEEWLKDKYHPTNLLTV 60
           MSYKQFIQELEDDILP+EAERRYQEYKSEYI+TQKR YFN+HKD EWLKDKYHPTNLLTV
Sbjct: 180 MSYKQFIQELEDDILPSEAERRYQEYKSEYITTQKRAYFNTHKDAEWLKDKYHPTNLLTV 239

Query: 61  IERRNENARQLAKDFLLDLQSGTLDLNPGLXXXXXXXXXXXXEPNSDEEADNAGKRKRHG 120
           IERRNENAR+LAK+FLLDLQSGTLD+NPGL            EPNS+EE D  GKR+RHG
Sbjct: 240 IERRNENARRLAKEFLLDLQSGTLDINPGLNSASTKSEQAT-EPNSEEETDAGGKRRRHG 298

Query: 121 RGSNKENDFSAAPKAHSISLEPRRIQADIQQAQTLVRKLDIEKGIADNILCNSDLNKNDD 180
           RGSNK+NDFSAAPKAH +S EPRRIQ DI Q Q +VRKLD EKGI DNILC +D +KN D
Sbjct: 299 RGSNKDNDFSAAPKAHPVSSEPRRIQEDIHQVQAVVRKLDKEKGIEDNILCTNDHSKNSD 358

Query: 181 KTHRGSVGPIIILRGLSSVKGLEGVELLDTLITYLWRIHGVDYYGLIETIEAKGFRHVRP 240
           K   GSVGP++I+RGL+S+KGLEGVELLDTLITYLWRIHGVDYYG++ET +AKGFRHVRP
Sbjct: 359 KARSGSVGPVVIIRGLTSIKGLEGVELLDTLITYLWRIHGVDYYGMLETSDAKGFRHVRP 418

Query: 241 EGTTHXXXXXXXXXXXXXLDSFWQGRLNGQDPVEVMTXXXXXXXXXXXXLDPYIRKIRDE 300
           EG  H             LDSFWQ RL+G DP+EV T            LDPY+RKIRDE
Sbjct: 419 EGARHEETAKSGSEWEKKLDSFWQRRLDGLDPLEVRTAKEKIDAAAADMLDPYVRKIRDE 478

Query: 301 KYGWKYGCGAKGCTKLFHASEFVHKHLKLKHPELAVEQTTKVREDLYFQNYM 352
           KYGWKYGCGAK CTKLFHA EFV+KHLKLKHPEL +E T+K+REDLYFQNYM
Sbjct: 479 KYGWKYGCGAKSCTKLFHAVEFVYKHLKLKHPELVLELTSKLREDLYFQNYM 530


>Medtr8g043980.1 | serrate RNA effector molecule-like protein | HC |
           chr8:16823584-16831186 | 20130731
          Length = 746

 Score =  517 bits (1332), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 254/352 (72%), Positives = 278/352 (78%), Gaps = 20/352 (5%)

Query: 1   MSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRTYFNSHKDEEWLKDKYHPTNLLTV 60
           MSYKQFIQELEDDILP EAERRYQEYKSEYISTQKR YF++HKDEEWLKDKYHPTNLLTV
Sbjct: 232 MSYKQFIQELEDDILPTEAERRYQEYKSEYISTQKRAYFSAHKDEEWLKDKYHPTNLLTV 291

Query: 61  IERRNENARQLAKDFLLDLQSGTLDLNPGLXXXXXXXXXXXXEPNSDEEADNAGKRKRHG 120
           IERRNE+ARQLAKDFLLDLQSGTLD NPGL            EPNS+EEA++  +R+R G
Sbjct: 292 IERRNESARQLAKDFLLDLQSGTLDPNPGLSASLSSKSGQASEPNSEEEAED--QRRRDG 349

Query: 121 RGSNKENDFSAAPKAHSISLEPRRIQADIQQAQTLVRKLDIEKGIADNILCNSDLNKNDD 180
            GSNK++DFSAAPKAH +S EPRRIQAD+QQAQ LVRKLD EK I DNILC+        
Sbjct: 350 WGSNKKSDFSAAPKAHPVSSEPRRIQADVQQAQALVRKLDTEKRIGDNILCS-------- 401

Query: 181 KTHRGSVGPIIILRGLSSVKGLEGVELLDTLITYLWRIHGVDYYGLIETIEAKGFRHVRP 240
                     II+RGL+SVKGLEGVELLDTLITYLWRIHGVDYYG+IET EAKGFRHVRP
Sbjct: 402 ----------IIIRGLTSVKGLEGVELLDTLITYLWRIHGVDYYGMIETNEAKGFRHVRP 451

Query: 241 EGTTHXXXXXXXXXXXXXLDSFWQGRLNGQDPVEVMTXXXXXXXXXXXXLDPYIRKIRDE 300
           E   H             LDSFWQGRLNGQDP+EV+             LDPY+RKIRDE
Sbjct: 452 ERKGHEETGKSGSEWEKKLDSFWQGRLNGQDPLEVLAAKEKMDAAAIEVLDPYVRKIRDE 511

Query: 301 KYGWKYGCGAKGCTKLFHASEFVHKHLKLKHPELAVEQTTKVREDLYFQNYM 352
           KYGWKYGCGAKGCTKLFHA+EFV+KHLKLKHPELA+EQT+K+REDLY QNYM
Sbjct: 512 KYGWKYGCGAKGCTKLFHAAEFVYKHLKLKHPELALEQTSKLREDLYTQNYM 563


>Medtr2g084355.1 | serrate RNA effector molecule-like protein,
           putative | HC | chr2:35534449-35532317 | 20130731
          Length = 248

 Score =  223 bits (569), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 112/181 (61%), Positives = 125/181 (69%), Gaps = 26/181 (14%)

Query: 172 NSDLNKNDDKTHRGSVGPIIILRGLSSVKGLEGVELLDTLITYLWRIHGVDYYGLIETIE 231
           +SD NK DDK+H GSVGP +I+RGL+  KGLEGVELLDTLITYLWRIHGVDYYG+IET E
Sbjct: 7   SSDHNKTDDKSHNGSVGPTVIIRGLTYFKGLEGVELLDTLITYLWRIHGVDYYGMIETNE 66

Query: 232 AKGFRHVRPEGTTHXXXXXXXXXXXXXLDSFWQGRLNGQDPVEVMTXXXXXXXXXXXXLD 291
           AKGFRHVRPE T H                             VM             LD
Sbjct: 67  AKGFRHVRPERTGHEET--------------------------VMAAKENIDAAAIEVLD 100

Query: 292 PYIRKIRDEKYGWKYGCGAKGCTKLFHASEFVHKHLKLKHPELAVEQTTKVREDLYFQNY 351
           P +RKIRDEKYGWKY CGAKGCTKLFHA+E V+KHLKLKH ELA+EQT+K+REDLY QNY
Sbjct: 101 PSVRKIRDEKYGWKYVCGAKGCTKLFHAAEVVYKHLKLKHLELALEQTSKLREDLYTQNY 160

Query: 352 M 352
           +
Sbjct: 161 I 161