Miyakogusa Predicted Gene

Lj3g3v1706700.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1706700.1 Non Characterized Hit- tr|I1MDA5|I1MDA5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.28432
PE,70.46,0,seg,NULL; ZINC_FINGER_C2H2_2,Zinc finger, C2H2;
AZ2-RELATED,NULL; ZINC FINGER PROTEIN,NULL; ZINC_FIN,CUFF.43000.1
         (349 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g093095.1 | C2H2-type zinc finger protein | HC | chr1:4193...   281   1e-75
Medtr4g059870.1 | C2H2 and C2HC zinc finger protein, putative | ...    87   3e-17
Medtr1g016010.1 | C2H2-type zinc finger protein | HC | chr1:4158...    87   4e-17
Medtr1g112270.1 | C2H2 zinc finger protein, putative | HC | chr1...    86   7e-17
Medtr1g112270.2 | C2H2 zinc finger protein, putative | HC | chr1...    86   8e-17
Medtr1g094115.2 | C2H2 zinc finger protein, putative | HC | chr1...    85   8e-17
Medtr1g094115.1 | C2H2 zinc finger protein, putative | HC | chr1...    85   9e-17
Medtr2g093960.1 | C2H2-type zinc finger protein | LC | chr2:4003...    85   1e-16
Medtr2g090745.1 | C2H2-like zinc finger protein, putative | HC |...    84   2e-16
Medtr8g017210.1 | C2H2-like zinc finger protein, putative | HC |...    84   2e-16
Medtr2g099990.1 | C2H2-type zinc finger protein | HC | chr2:4289...    83   4e-16
Medtr2g099990.2 | C2H2-type zinc finger protein | HC | chr2:4289...    80   3e-15
Medtr2g017720.1 | F-box associated protein | LC | chr2:5437660-5...    54   2e-07

>Medtr1g093095.1 | C2H2-type zinc finger protein | HC |
           chr1:41939075-41940250 | 20130731
          Length = 294

 Score =  281 bits (718), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 126/158 (79%), Positives = 143/158 (90%), Gaps = 3/158 (1%)

Query: 162 QYWIPTPAQILIGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQP---TA 218
           QYWIP+PAQIL+GPTQFSC +C KTFNR+NNMQMHMWGHGSQYRKGPESL+G +P   ++
Sbjct: 99  QYWIPSPAQILVGPTQFSCTVCNKTFNRFNNMQMHMWGHGSQYRKGPESLKGPKPASSSS 158

Query: 219 MLRLPCYCCAPGCKNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCCKAFAVRGDWR 278
           ML+LPCYCCA GC+NNI++PRA+PLKDFRTLQTHYKRKHG K F CRKC K FAVRGDWR
Sbjct: 159 MLKLPCYCCAEGCRNNINYPRARPLKDFRTLQTHYKRKHGGKSFECRKCRKTFAVRGDWR 218

Query: 279 THEKNCGKLWYCSCGSDFKHKRSLKDHIKAFGNGHKAY 316
           THEKNCGKLW+C CGSDFKHKRSLKDH++AFGNGH  +
Sbjct: 219 THEKNCGKLWFCICGSDFKHKRSLKDHVRAFGNGHAPH 256


>Medtr4g059870.1 | C2H2 and C2HC zinc finger protein, putative | HC
           | chr4:22086566-22083892 | 20130731
          Length = 495

 Score = 86.7 bits (213), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 50/139 (35%), Positives = 68/139 (48%), Gaps = 9/139 (6%)

Query: 172 LIGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPCYCCAPGC 231
           L+   +F C +C K F R  N+Q+H  GH       P  L+       +R   Y C    
Sbjct: 61  LMATNRFLCEICNKGFQRDQNLQLHRRGHNL-----PWKLKQRANKDQIRKKVYVCPE-- 113

Query: 232 KNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCCKAFAVRGDWRTHEKNCGKLWY-C 290
           K  + H  ++ L D   ++ HY RKHG K + C KC K +AV+ DW+ H K CG   Y C
Sbjct: 114 KTCVHHEPSRALGDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHSKICGTREYKC 173

Query: 291 SCGSDFKHKRSLKDHIKAF 309
            CG+ F  K S   H +AF
Sbjct: 174 DCGTIFSRKDSFITH-RAF 191


>Medtr1g016010.1 | C2H2-type zinc finger protein | HC |
           chr1:4158857-4161721 | 20130731
          Length = 452

 Score = 86.7 bits (213), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 72/142 (50%), Gaps = 11/142 (7%)

Query: 170 QILIGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPCYCC-A 228
           Q L+   +F C +C K F R  N+Q+H  GH       P  L+      ++R   Y C  
Sbjct: 62  QTLLATNRFICEICNKGFQRDQNLQLHKRGHNL-----PWKLKKRNVNEIIRKKVYVCPE 116

Query: 229 PGCKNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCCKAFAVRGDWRTHEKNCG-KL 287
           P C   + H  ++ L D   ++ H+ RKHG K + C KC K +AV+ DW+ H K CG K 
Sbjct: 117 PTC---VHHDPSRALGDLTGIKKHFFRKHGEKKWKCEKCSKRYAVQSDWKAHSKICGTKE 173

Query: 288 WYCSCGSDFKHKRSLKDHIKAF 309
           + C CG+ F  + S   H +AF
Sbjct: 174 YKCDCGTLFSRRDSFITH-RAF 194


>Medtr1g112270.1 | C2H2 zinc finger protein, putative | HC |
           chr1:50789869-50782797 | 20130731
          Length = 582

 Score = 85.5 bits (210), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 49/146 (33%), Positives = 74/146 (50%), Gaps = 10/146 (6%)

Query: 165 IPTPAQILIGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPC 224
           I    + L+   +F C +C K F R  N+Q+H  GH   ++   ++ +  +P   + L  
Sbjct: 71  IALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTK--EPKRKVYL-- 126

Query: 225 YCCAPGCKNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCCKAFAVRGDWRTHEKNC 284
            C  P C   + H  ++ L D   ++ HY RKHG K + C KC K +AV+ DW+ H K C
Sbjct: 127 -CPEPTC---VHHDPSRALGDLTGIKKHYSRKHGEKKWKCDKCSKKYAVQSDWKAHSKTC 182

Query: 285 GKLWY-CSCGSDFKHKRSLKDHIKAF 309
           G   Y C CG+ F  + S   H +AF
Sbjct: 183 GTREYRCDCGTLFSRRDSFITH-RAF 207


>Medtr1g112270.2 | C2H2 zinc finger protein, putative | HC |
           chr1:50790900-50782752 | 20130731
          Length = 571

 Score = 85.5 bits (210), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 49/146 (33%), Positives = 74/146 (50%), Gaps = 10/146 (6%)

Query: 165 IPTPAQILIGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPC 224
           I    + L+   +F C +C K F R  N+Q+H  GH   ++   ++ +  +P   + L  
Sbjct: 60  IALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTK--EPKRKVYL-- 115

Query: 225 YCCAPGCKNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCCKAFAVRGDWRTHEKNC 284
            C  P C   + H  ++ L D   ++ HY RKHG K + C KC K +AV+ DW+ H K C
Sbjct: 116 -CPEPTC---VHHDPSRALGDLTGIKKHYSRKHGEKKWKCDKCSKKYAVQSDWKAHSKTC 171

Query: 285 GKLWY-CSCGSDFKHKRSLKDHIKAF 309
           G   Y C CG+ F  + S   H +AF
Sbjct: 172 GTREYRCDCGTLFSRRDSFITH-RAF 196


>Medtr1g094115.2 | C2H2 zinc finger protein, putative | HC |
           chr1:42286106-42289867 | 20130731
          Length = 539

 Score = 85.1 bits (209), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 50/147 (34%), Positives = 74/147 (50%), Gaps = 12/147 (8%)

Query: 165 IPTPAQILIGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPC 224
           I    + L+   +F C +C K F R  N+Q+H  GH   ++   +S +  +P    R   
Sbjct: 63  IALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKSNK--EP----RRKV 116

Query: 225 YCC-APGCKNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCCKAFAVRGDWRTHEKN 283
           Y C  P C   + H  ++ L D   ++ H+ RKHG K + C KC K +AV+ DW+ H K 
Sbjct: 117 YLCPEPTC---VHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT 173

Query: 284 CGKLWY-CSCGSDFKHKRSLKDHIKAF 309
           CG   Y C CG+ F  + S   H +AF
Sbjct: 174 CGTREYRCDCGTLFSRRDSFITH-RAF 199


>Medtr1g094115.1 | C2H2 zinc finger protein, putative | HC |
           chr1:42286195-42289752 | 20130731
          Length = 522

 Score = 85.1 bits (209), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 48/136 (35%), Positives = 72/136 (52%), Gaps = 10/136 (7%)

Query: 175 PTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPCYCCAPGCKNN 234
           P++F C +C K F R  N+Q+H  GH   ++   +S +  +P   + L   C  P C   
Sbjct: 56  PSKFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKSNK--EPRRKVYL---CPEPTC--- 107

Query: 235 IDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCCKAFAVRGDWRTHEKNCGKLWY-CSCG 293
           + H  ++ L D   ++ H+ RKHG K + C KC K +AV+ DW+ H K CG   Y C CG
Sbjct: 108 VHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTREYRCDCG 167

Query: 294 SDFKHKRSLKDHIKAF 309
           + F  + S   H +AF
Sbjct: 168 TLFSRRDSFITH-RAF 182


>Medtr2g093960.1 | C2H2-type zinc finger protein | LC |
           chr2:40039886-40042385 | 20130731
          Length = 414

 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 50/146 (34%), Positives = 73/146 (50%), Gaps = 9/146 (6%)

Query: 165 IPTPAQILIGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPC 224
           I    + L+   +F C +C K F R  N+Q+H  GH       P  L+      ++R   
Sbjct: 48  IALSPKSLMTSNRFICEVCNKGFKRDQNLQLHRRGHNL-----PWKLKQRNKLEVIRKKV 102

Query: 225 YCCAPGCKNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCCKAFAVRGDWRTHEKNC 284
           Y C    K+ + H  ++ L D   ++ H+ RKHG K + C KC K +AV+ DW+ H K C
Sbjct: 103 YVCPE--KSCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHSKIC 160

Query: 285 G-KLWYCSCGSDFKHKRSLKDHIKAF 309
           G K + C CG+ F  K S   H +AF
Sbjct: 161 GTKEYRCDCGTLFSRKDSFLTH-RAF 185


>Medtr2g090745.1 | C2H2-like zinc finger protein, putative | HC |
           chr2:38896799-38894235 | 20130731
          Length = 429

 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 76/159 (47%), Gaps = 13/159 (8%)

Query: 165 IPTPAQILIGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPC 224
           I    + L+   +F C +C K F R  N+Q+H  GH       P  L+      + +   
Sbjct: 23  ISLSPKTLMATNRFVCEICLKDFQRDQNLQLHRRGHNL-----PWKLKQRTSKEIRKRVY 77

Query: 225 YCCAPGCKNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCCKAFAVRGDWRTHEKNC 284
            C    C +N  HP ++ L D   ++ H+ RKHG K + C KC K +AV+ DW+ H K C
Sbjct: 78  VCPEKTCVHN--HP-SRALGDLTGIKKHFCRKHGEKKWKCEKCSKFYAVQSDWKAHSKTC 134

Query: 285 GKLWY-CSCGSDFKHKRSLKDHIKAFGNG---HKAYING 319
           G   Y C CG+ F  + S   H +AF +      A ING
Sbjct: 135 GTREYKCDCGTIFSRRDSFVTH-RAFCDALAEETARING 172


>Medtr8g017210.1 | C2H2-like zinc finger protein, putative | HC |
           chr8:5790010-5786899 | 20130731
          Length = 517

 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 70/140 (50%), Gaps = 12/140 (8%)

Query: 172 LIGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPCYCC-APG 230
           L+   +F C +C K F R  N+Q+H  GH   ++    +      +  +R   Y C  P 
Sbjct: 85  LLAKNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQRT------SKEIRKKVYVCPEPT 138

Query: 231 CKNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCCKAFAVRGDWRTHEKNCGKLWY- 289
           C   + H  ++ L D   ++ H+ RKHG K + C KC K +AV+ DW+ H K CG   Y 
Sbjct: 139 C---VHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTREYR 195

Query: 290 CSCGSDFKHKRSLKDHIKAF 309
           C CG+ F  + S   H +AF
Sbjct: 196 CDCGTLFSRRDSFITH-RAF 214


>Medtr2g099990.1 | C2H2-type zinc finger protein | HC |
           chr2:42897047-42899888 | 20130731
          Length = 468

 Score = 82.8 bits (203), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 70/146 (47%), Gaps = 10/146 (6%)

Query: 165 IPTPAQILIGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPC 224
           I    + L+   +F C +C K F R  N+Q+H  GH       P  L+      + +   
Sbjct: 62  IALSPKTLMATNRFICEICNKGFQRDQNLQLHKRGHNL-----PWKLKQRTSNEIRKKVY 116

Query: 225 YCCAPGCKNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCCKAFAVRGDWRTHEKNC 284
            C  P C   + H  ++ L D   ++ H+ RKHG K + C KC K +AV+ DW+ H K C
Sbjct: 117 VCPEPTC---VHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKTC 173

Query: 285 GKLWY-CSCGSDFKHKRSLKDHIKAF 309
           G   Y C CG+ F  + S   H +AF
Sbjct: 174 GTREYRCDCGTLFSRRDSFITH-RAF 198


>Medtr2g099990.2 | C2H2-type zinc finger protein | HC |
           chr2:42897047-42899888 | 20130731
          Length = 399

 Score = 80.1 bits (196), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 67/138 (48%), Gaps = 10/138 (7%)

Query: 173 IGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPCYCCAPGCK 232
           +   +F C +C K F R  N+Q+H  GH       P  L+      + +    C  P C 
Sbjct: 1   MATNRFICEICNKGFQRDQNLQLHKRGHNL-----PWKLKQRTSNEIRKKVYVCPEPTC- 54

Query: 233 NNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCCKAFAVRGDWRTHEKNCGKLWY-CS 291
             + H  ++ L D   ++ H+ RKHG K + C KC K +AV+ DW+ H K CG   Y C 
Sbjct: 55  --VHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYRCD 112

Query: 292 CGSDFKHKRSLKDHIKAF 309
           CG+ F  + S   H +AF
Sbjct: 113 CGTLFSRRDSFITH-RAF 129


>Medtr2g017720.1 | F-box associated protein | LC |
           chr2:5437660-5435484 | 20130731
          Length = 432

 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 13/109 (11%)

Query: 172 LIGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPCYCCAPGC 231
           L+   +F C +C K F R  N+Q+H  GH   ++    +      +  +R   Y C    
Sbjct: 336 LMATNRFVCEICLKDFQRDQNLQLHRRGHNLPWKLKQRT------SKKIRKRVYVCPEKI 389

Query: 232 KNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCCKAFAVRGDWRTH 280
           + + +HP ++ L D   ++ H+ RKHG K     KC K + V+ DW+ H
Sbjct: 390 RVH-NHP-SRALGDLTGIKKHFCRKHGEK-----KCSKFYVVQSDWKAH 431