Miyakogusa Predicted Gene
- Lj3g3v1684630.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v1684630.1 CUFF.42995.1
(868 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g099640.1 | origin recognition complex subunit 1 | HC | ch... 1288 0.0
Medtr3g463490.1 | cell division control protein | HC | chr3:2542... 118 3e-26
Medtr3g463490.2 | cell division control protein | HC | chr3:2542... 117 3e-26
Medtr1g109100.1 | origin recognition complex subunit 4 | HC | ch... 55 3e-07
Medtr3g117270.2 | PHD finger and bromo-adjacent-like domain prot... 54 5e-07
Medtr3g117270.3 | PHD finger and bromo-adjacent-like domain prot... 54 7e-07
Medtr3g117270.1 | PHD finger and bromo-adjacent-like domain prot... 54 7e-07
Medtr3g117270.4 | PHD finger and bromo-adjacent-like domain prot... 54 9e-07
Medtr3g117280.1 | PHD finger and bromo-adjacent-like domain prot... 53 1e-06
Medtr2g084620.2 | DNA-binding and zinc-finger protein | HC | chr... 52 3e-06
Medtr2g084620.1 | DNA-binding and zinc-finger protein | HC | chr... 51 4e-06
Medtr2g084615.1 | DNA-binding and zinc-finger protein | HC | chr... 51 5e-06
Medtr2g078310.1 | PHD finger and bromo-adjacent-like domain prot... 50 9e-06
>Medtr8g099640.1 | origin recognition complex subunit 1 | HC |
chr8:42142602-42133661 | 20130731
Length = 891
Score = 1288 bits (3333), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 629/766 (82%), Positives = 670/766 (87%), Gaps = 21/766 (2%)
Query: 107 KKRNGKGASIDAQFAPVSPDQSESXXXXXXXXXXXXXXXXXXXXXXVVTRAMAVKKGRRA 166
KKRNGKG S+ FAP SPDQSE+ VVTRA GR+
Sbjct: 143 KKRNGKGDSVKVSFAPTSPDQSETKKRKRKNEVKVEKM--------VVTRA-----GRK- 188
Query: 167 KSEGAVLXXXXXXXXXXXDGGEFEVGDNVYVKRREDASSDDEDPEVEECRLCFSSGEETM 226
G + DGGEFEVGD+VYVKRREDA+SD+EDPEVEECR CF SG+E M
Sbjct: 189 ---GGKIAKVQYYKKVVYDGGEFEVGDDVYVKRREDATSDEEDPEVEECRFCFRSGDEIM 245
Query: 227 LECDGCLGGFHLKCLTPPLSDVPEGDWTCGFCEARKMGKEVDFPKPPEGKRLVRTMRQKL 286
+ECD CLGGFHLKCLTPPL DVPEGDW CG CE RKMGK+VDFPKPP+GK+LVRTMRQ+L
Sbjct: 246 IECDSCLGGFHLKCLTPPLKDVPEGDWICGICEGRKMGKDVDFPKPPKGKKLVRTMRQRL 305
Query: 287 LSSDLWAARIESIWKEVDGKYWCRVRWYTIPEETSVGRQPHNLSRELYRANDFADIEIES 346
SSDLWAARIESIWKEVDG YWCRVRWY IPEETSVGRQPHNLSRELYR ND A IE+ES
Sbjct: 306 QSSDLWAARIESIWKEVDGSYWCRVRWYMIPEETSVGRQPHNLSRELYRTNDLAKIEMES 365
Query: 347 VLRHCYVMTPKEYTKASNEGDDVFLCEYEYDIHWHSFKRLADIDNERESGEATDSDEDWS 406
VLRHCYVM PKEY KASNEGDDVFLCEYEYDI WHSFKRLADID+ERE+ + +D DEDW+
Sbjct: 366 VLRHCYVMIPKEYAKASNEGDDVFLCEYEYDIQWHSFKRLADIDDERENSDESDGDEDWN 425
Query: 407 HDKESYSDTDEDVEYEEENIKNGLSQPSTSHQLAANLHKGRFFGLQKIGTKIIPQHIRSH 466
DKES SDTDEDVEY+EENIK SQP TSHQLAANLHKGRFFGLQKIGTK IP+HIRSH
Sbjct: 426 MDKESDSDTDEDVEYDEENIKISQSQPPTSHQLAANLHKGRFFGLQKIGTKRIPEHIRSH 485
Query: 467 KQTDLERAKATLLLASLPKSSPCRNKEMEEITTFIKGAISDDQCLGRCLYIHGVPGTGKT 526
KQT+LERAKA+LLLASLPKS PCRNKEM+EITTFIKGAISD+QCLGRCLYIHGVPGTGKT
Sbjct: 486 KQTNLERAKASLLLASLPKSLPCRNKEMDEITTFIKGAISDNQCLGRCLYIHGVPGTGKT 545
Query: 527 MSVLAVMRSLRAEVDAGNIKPYCFVEINGLKLASPENIYRVIYEALNGHRVSWKKALHVL 586
MSVL+VMRSL++EVDAGNIKPYCFVEINGLKLASPENIY+VIYEALNGHRV WK+AL +L
Sbjct: 546 MSVLSVMRSLKSEVDAGNIKPYCFVEINGLKLASPENIYKVIYEALNGHRVGWKEALRLL 605
Query: 587 NERFVEGKRTGEEADRPCILLIDELDLLVTRNQSVLYNILDWPTKPHSKLIVIGIANTMD 646
NERFVEGK+TGEEADRPCILLIDELDLLVTRNQSVLYNILDWPTKPHSKLIVIGIANTMD
Sbjct: 606 NERFVEGKKTGEEADRPCILLIDELDLLVTRNQSVLYNILDWPTKPHSKLIVIGIANTMD 665
Query: 647 LPEKLLPRISSRMGIHRLCFSPYNYQQLQEIISSRLKGIDVFEKQAIEFASRK----VAA 702
LPEKLLPRISSRMGI RLCF+PYNYQQLQEIISSRL GID+FEKQA+EFASRK VAA
Sbjct: 666 LPEKLLPRISSRMGIQRLCFAPYNYQQLQEIISSRLNGIDIFEKQAMEFASRKFSLQVAA 725
Query: 703 ISGDARRALEICRRAAEIADYRTKKLVSSSDSFTAGKGLVAMADVEAAIQEMFQAPHIQV 762
ISGDARRALEICRRAAEIADY+ KKL S D+ TAGKGLV MADVE+AIQEMFQAPHIQV
Sbjct: 726 ISGDARRALEICRRAAEIADYQMKKLASDPDNVTAGKGLVCMADVESAIQEMFQAPHIQV 785
Query: 763 MKHCSRISKIFLTAMVHELYKTGMGETTFEKLAMAVSRLCTSNGEVFPGYDALLQVGCKL 822
MK+CSR+ KIFLTAMVHELYKTGMGETTFEKLAM VS LC SNGEVFPG+D LLQVGCKL
Sbjct: 786 MKNCSRLGKIFLTAMVHELYKTGMGETTFEKLAMTVSCLCGSNGEVFPGHDILLQVGCKL 845
Query: 823 GECRIILCEAGAKHRLQKLQLNFPSDDVAFSLRDCKDLPWLSKYLM 868
GECRIILCEAGAKHRLQKLQLNFPSDDVAFSLRDCKDLPWLSKYLM
Sbjct: 846 GECRIILCEAGAKHRLQKLQLNFPSDDVAFSLRDCKDLPWLSKYLM 891
>Medtr3g463490.1 | cell division control protein | HC |
chr3:25428111-25423499 | 20130731
Length = 486
Score = 118 bits (295), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 130/252 (51%), Gaps = 8/252 (3%)
Query: 474 AKATLLLASLPKSSPCRNKEMEEITTFIKGAISDDQCLGRCLYIHGVPGTGKTMSVLAVM 533
K L L++ P + CR +E + F KG + ++ LYI G PGTGK++S+ V
Sbjct: 80 VKEVLHLSTAPSTMVCREEEQNVVLGFCKGCVEHEK--AGSLYICGCPGTGKSLSMEKVK 137
Query: 534 RSLRAEVDAGNIKPYCFVEINGLKLASPENIYRVIYEALNGHRVSWKKALHVLNERFVEG 593
+L G + +N L++ +I+ I L H+ KK ++
Sbjct: 138 VNLLNWAAEGGFPLPDVLSVNCTSLSNTSDIFTKI---LGLHKTLGKKGSGTPLQQLQNL 194
Query: 594 KRTGEEADRPCILLIDELDLLVTRNQSVLYNILDWPTKPHSKLIVIGIANTMDLPEKLLP 653
+++ DELD L+T++++VL+++ T P S+ I+IG+AN +DL ++ LP
Sbjct: 195 YSHKSPTLNMILIVADELDYLITKDRAVLHDLFMLTTFPFSRCILIGVANAIDLADRFLP 254
Query: 654 RISS-RMGIHRLCFSPYNYQQLQEIISSRLKGID--VFEKQAIEFASRKVAAISGDARRA 710
R+++ + F Y Q+ +II RL + VF+ QA+E +RKVAA SGD R A
Sbjct: 255 RLTALNCKPTVVTFRAYTKDQILKIIQERLNELPYIVFQHQALELCARKVAAASGDMRNA 314
Query: 711 LEICRRAAEIAD 722
L ICR A E+ +
Sbjct: 315 LCICRSAIEMLE 326
>Medtr3g463490.2 | cell division control protein | HC |
chr3:25428111-25423554 | 20130731
Length = 493
Score = 117 bits (294), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 130/252 (51%), Gaps = 8/252 (3%)
Query: 474 AKATLLLASLPKSSPCRNKEMEEITTFIKGAISDDQCLGRCLYIHGVPGTGKTMSVLAVM 533
K L L++ P + CR +E + F KG + ++ LYI G PGTGK++S+ V
Sbjct: 80 VKEVLHLSTAPSTMVCREEEQNVVLGFCKGCVEHEK--AGSLYICGCPGTGKSLSMEKVK 137
Query: 534 RSLRAEVDAGNIKPYCFVEINGLKLASPENIYRVIYEALNGHRVSWKKALHVLNERFVEG 593
+L G + +N L++ +I+ I L H+ KK ++
Sbjct: 138 VNLLNWAAEGGFPLPDVLSVNCTSLSNTSDIFTKI---LGLHKTLGKKGSGTPLQQLQNL 194
Query: 594 KRTGEEADRPCILLIDELDLLVTRNQSVLYNILDWPTKPHSKLIVIGIANTMDLPEKLLP 653
+++ DELD L+T++++VL+++ T P S+ I+IG+AN +DL ++ LP
Sbjct: 195 YSHKSPTLNMILIVADELDYLITKDRAVLHDLFMLTTFPFSRCILIGVANAIDLADRFLP 254
Query: 654 RISS-RMGIHRLCFSPYNYQQLQEIISSRLKGID--VFEKQAIEFASRKVAAISGDARRA 710
R+++ + F Y Q+ +II RL + VF+ QA+E +RKVAA SGD R A
Sbjct: 255 RLTALNCKPTVVTFRAYTKDQILKIIQERLNELPYIVFQHQALELCARKVAAASGDMRNA 314
Query: 711 LEICRRAAEIAD 722
L ICR A E+ +
Sbjct: 315 LCICRSAIEMLE 326
>Medtr1g109100.1 | origin recognition complex subunit 4 | HC |
chr1:49293655-49298886 | 20130731
Length = 412
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 85/184 (46%), Gaps = 8/184 (4%)
Query: 600 ADRPCILLIDELDLLVTRNQSVLYNILDWPTKPHSKLIVIGIANTMDLPEKLLPRISSRM 659
A + I ++DE DL Q +LY++LD S+ +V+GI+ +D + L R+ SR
Sbjct: 132 AHKTVIFILDEFDLFAQGKQRLLYSLLDAMQSVSSQAVVLGISCRLDADQLLEKRVRSRF 191
Query: 660 GIHRLCFSPYNYQQLQEIISSRLK-GID--VFEKQAIEFASRKVAAISGDARRALEICRR 716
+L F P + + Q ++ L ID + A+EF ++KV I D +R EI +
Sbjct: 192 SHRKLLFLPPSIEDSQRLLVHMLTLPIDSSLPYDYAVEF-NKKVQNIIED-KRFKEIFNK 249
Query: 717 AAEI---ADYRTKKLVSSSDSFTAGKGLVAMADVEAAIQEMFQAPHIQVMKHCSRISKIF 773
+ K L + G ++ + E A + + P ++ +K+CS +
Sbjct: 250 LLNFDSSVKHLLKFLFYAVSHMDLQTGFLSRENFETAFTNIQRQPKLECLKNCSVLELYI 309
Query: 774 LTAM 777
L +M
Sbjct: 310 LVSM 313
>Medtr3g117270.2 | PHD finger and bromo-adjacent-like domain protein
| HC | chr3:54853383-54857559 | 20130731
Length = 164
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
Query: 282 MRQKLLSSDLWAARIESIWKEVDG-KYWCRVRWYTIPEETSVGRQPHNLSRELYRANDFA 340
MR S + A+IE I + G VRWY PEE+ GR+ + S+EL+ ++ F
Sbjct: 33 MRPSDPSKPSYVAKIEGIEADSRGANVKVNVRWYYRPEESIGGRRQFHGSKELFLSDHFD 92
Query: 341 DIEIESVLRHCYVMTPKEYTKASNEGDDVFLCEYEYDIHWHSF 383
+++ C V K YTK G+D F C +EY+ +F
Sbjct: 93 VQSADTIEGKCVVHGFKSYTKLDAVGNDDFFCRFEYNSATGAF 135
>Medtr3g117270.3 | PHD finger and bromo-adjacent-like domain protein
| HC | chr3:54853329-54857095 | 20130731
Length = 211
Score = 53.9 bits (128), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
Query: 282 MRQKLLSSDLWAARIESIWKEVDG-KYWCRVRWYTIPEETSVGRQPHNLSRELYRANDFA 340
MR S + A+IE I + G VRWY PEE+ GR+ + S+EL+ ++ F
Sbjct: 33 MRPSDPSKPSYVAKIEGIEADSRGANVKVNVRWYYRPEESIGGRRQFHGSKELFLSDHFD 92
Query: 341 DIEIESVLRHCYVMTPKEYTKASNEGDDVFLCEYEYD 377
+++ C V K YTK G+D F C +EY+
Sbjct: 93 VQSADTIEGKCVVHGFKSYTKLDAVGNDDFFCRFEYN 129
>Medtr3g117270.1 | PHD finger and bromo-adjacent-like domain protein
| HC | chr3:54853329-54857739 | 20130731
Length = 218
Score = 53.9 bits (128), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
Query: 282 MRQKLLSSDLWAARIESIWKEVDG-KYWCRVRWYTIPEETSVGRQPHNLSRELYRANDFA 340
MR S + A+IE I + G VRWY PEE+ GR+ + S+EL+ ++ F
Sbjct: 33 MRPSDPSKPSYVAKIEGIEADSRGANVKVNVRWYYRPEESIGGRRQFHGSKELFLSDHFD 92
Query: 341 DIEIESVLRHCYVMTPKEYTKASNEGDDVFLCEYEYD 377
+++ C V K YTK G+D F C +EY+
Sbjct: 93 VQSADTIEGKCVVHGFKSYTKLDAVGNDDFFCRFEYN 129
>Medtr3g117270.4 | PHD finger and bromo-adjacent-like domain protein
| HC | chr3:54853329-54857739 | 20130731
Length = 165
Score = 53.5 bits (127), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
Query: 282 MRQKLLSSDLWAARIESIWKEVDG-KYWCRVRWYTIPEETSVGRQPHNLSRELYRANDFA 340
MR S + A+IE I + G VRWY PEE+ GR+ + S+EL+ ++ F
Sbjct: 33 MRPSDPSKPSYVAKIEGIEADSRGANVKVNVRWYYRPEESIGGRRQFHGSKELFLSDHFD 92
Query: 341 DIEIESVLRHCYVMTPKEYTKASNEGDDVFLCEYEYD 377
+++ C V K YTK G+D F C +EY+
Sbjct: 93 VQSADTIEGKCVVHGFKSYTKLDAVGNDDFFCRFEYN 129
>Medtr3g117280.1 | PHD finger and bromo-adjacent-like domain protein
| HC | chr3:54859053-54862407 | 20130731
Length = 196
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%)
Query: 310 RVRWYTIPEETSVGRQPHNLSRELYRANDFADIEIESVLRHCYVMTPKEYTKASNEGDDV 369
RVRWY PEET GR+ + S+EL ++ F ++++ C V + K+Y K GDD
Sbjct: 40 RVRWYYWPEETKKGRRHFHGSKELILSDHFDVQSVDTIEGKCTVHSLKKYMKLDVVGDDD 99
Query: 370 FLCEYEYD 377
F C + Y+
Sbjct: 100 FFCRFNYN 107
>Medtr2g084620.2 | DNA-binding and zinc-finger protein | HC |
chr2:35851349-35841698 | 20130731
Length = 1547
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 203 ASSDDE-DPEVEECRLCFSSGEETMLECDGCLGGFHLKCLTPPLSDVPEGDWTCGFCEAR 261
A+S+DE D +ECRLC G T+L CDGC +H +C+ +PEG W C C+
Sbjct: 390 ANSEDEVDKNGDECRLCSMDG--TLLCCDGCPAAYHSRCIGVMKMYIPEGPWHCPECKIN 447
Query: 262 KMGKEV 267
+G +
Sbjct: 448 MIGPTI 453
>Medtr2g084620.1 | DNA-binding and zinc-finger protein | HC |
chr2:35851324-35841698 | 20130731
Length = 1724
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 203 ASSDDE-DPEVEECRLCFSSGEETMLECDGCLGGFHLKCLTPPLSDVPEGDWTCGFCEAR 261
A+S+DE D +ECRLC G T+L CDGC +H +C+ +PEG W C C+
Sbjct: 390 ANSEDEVDKNGDECRLCSMDG--TLLCCDGCPAAYHSRCIGVMKMYIPEGPWHCPECKIN 447
Query: 262 KMGKEV 267
+G +
Sbjct: 448 MIGPTI 453
>Medtr2g084615.1 | DNA-binding and zinc-finger protein | HC |
chr2:35841667-35834521 | 20130731
Length = 1528
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 203 ASSDDE-DPEVEECRLCFSSGEETMLECDGCLGGFHLKCLTPPLSDVPEGDWTCGFCEAR 261
A+S+DE D +ECRLC G T+L CDGC +H +C+ +PEG W C C+
Sbjct: 373 ANSEDEVDKNGDECRLCGMDG--TLLCCDGCPAAYHSRCIGVYKMYIPEGPWHCPECKIN 430
Query: 262 KMGKEV 267
+G +
Sbjct: 431 MIGPTI 436
>Medtr2g078310.1 | PHD finger and bromo-adjacent-like domain protein
| HC | chr2:32595275-32591772 | 20130731
Length = 218
Score = 50.1 bits (118), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%)
Query: 282 MRQKLLSSDLWAARIESIWKEVDGKYWCRVRWYTIPEETSVGRQPHNLSRELYRANDFAD 341
MR S + AR+E I ++ RVRWY PEE+ GR+ + ++EL+ ++ F
Sbjct: 31 MRPSDTSKPPYVARVEKIEQDNRNNVRVRVRWYYRPEESIGGRRQFHGAKELFLSDHFDV 90
Query: 342 IEIESVLRHCYVMTPKEYTKASNEGDDVFLCEYEY 376
++ C V + K YTK N G + + C +EY
Sbjct: 91 QSAHTIEGKCIVHSFKNYTKLENVGSEDYYCRFEY 125