Miyakogusa Predicted Gene

Lj3g3v1683560.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1683560.1 tr|B9HP97|B9HP97_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_650201 PE=4
SV=1,75,9e-19,seg,NULL,CUFF.42987.1
         (96 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g097890.1 | hypothetical protein | HC | chr2:41817978-4181...   110   2e-25
Medtr2g097890.3 | hypothetical protein | HC | chr2:41817978-4181...   109   6e-25
Medtr2g097890.2 | hypothetical protein | HC | chr2:41817958-4181...    97   3e-21

>Medtr2g097890.1 | hypothetical protein | HC |
          chr2:41817978-41814357 | 20130731
          Length = 154

 Score =  110 bits (276), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 52/96 (54%), Positives = 63/96 (65%)

Query: 1  MARALGSTVDGLRNYSLLRFSLSFIRTLXXXXXXXXXXXXXXXXXXXXXXXXXNLFEVAQ 60
          MA A+ S ++ L+N S+L+ + +FIRTL                         N FEVAQ
Sbjct: 1  MANAMCSKINTLQNSSILKSTFTFIRTLSTSSPSPSSDAASETTKKSKRRKKKNFFEVAQ 60

Query: 61 FLPNWGIGYHMAKTHWKEITYEITKINLYKDGKHGK 96
          FLPNWGIGYHMAKTHWKE++YEITK+NLYKDGKHGK
Sbjct: 61 FLPNWGIGYHMAKTHWKEVSYEITKLNLYKDGKHGK 96


>Medtr2g097890.3 | hypothetical protein | HC |
          chr2:41817978-41814961 | 20130731
          Length = 119

 Score =  109 bits (272), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 52/96 (54%), Positives = 63/96 (65%)

Query: 1  MARALGSTVDGLRNYSLLRFSLSFIRTLXXXXXXXXXXXXXXXXXXXXXXXXXNLFEVAQ 60
          MA A+ S ++ L+N S+L+ + +FIRTL                         N FEVAQ
Sbjct: 1  MANAMCSKINTLQNSSILKSTFTFIRTLSTSSPSPSSDAASETTKKSKRRKKKNFFEVAQ 60

Query: 61 FLPNWGIGYHMAKTHWKEITYEITKINLYKDGKHGK 96
          FLPNWGIGYHMAKTHWKE++YEITK+NLYKDGKHGK
Sbjct: 61 FLPNWGIGYHMAKTHWKEVSYEITKLNLYKDGKHGK 96


>Medtr2g097890.2 | hypothetical protein | HC |
          chr2:41817958-41814357 | 20130731
          Length = 110

 Score = 97.4 bits (241), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 46/90 (51%), Positives = 57/90 (63%)

Query: 1  MARALGSTVDGLRNYSLLRFSLSFIRTLXXXXXXXXXXXXXXXXXXXXXXXXXNLFEVAQ 60
          MA A+ S ++ L+N S+L+ + +FIRTL                         N FEVAQ
Sbjct: 1  MANAMCSKINTLQNSSILKSTFTFIRTLSTSSPSPSSDAASETTKKSKRRKKKNFFEVAQ 60

Query: 61 FLPNWGIGYHMAKTHWKEITYEITKINLYK 90
          FLPNWGIGYHMAKTHWKE++YEITK+NLYK
Sbjct: 61 FLPNWGIGYHMAKTHWKEVSYEITKLNLYK 90