Miyakogusa Predicted Gene

Lj3g3v1682540.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1682540.1 tr|A4RTY0|A4RTY0_OSTLU MPT family transporter:
inner membrane translocase (Import) Tim10 OS=Ostreoco,50.68,5e-18,no
description,Mitochondrial inner membrane translocase complex,
Tim8/9/10/13-zinc finger-like; SUBF,CUFF.42994.1
         (82 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g097870.1 | import inner membrane translocase protein | HC...   152   7e-38
Medtr2g097870.2 | import inner membrane translocase protein | HC...   137   2e-33

>Medtr2g097870.1 | import inner membrane translocase protein | HC
          | chr2:41812760-41810550 | 20130731
          Length = 84

 Score =  152 bits (384), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 71/81 (87%), Positives = 77/81 (95%), Gaps = 3/81 (3%)

Query: 1  MAA---PPSALDKEQIFGMAEKEMEYRVELFNKMTQTCFNKCVENRYKESELNMGENSCI 57
          MAA   PPS LDK+QIFGMAEKEMEYRVELFNKMTQ+CFNKCV+N+YKESELNMGEN+CI
Sbjct: 1  MAANGMPPSGLDKDQIFGMAEKEMEYRVELFNKMTQSCFNKCVDNKYKESELNMGENTCI 60

Query: 58 DRCVSKYWHVTNLIGQLLGSG 78
          DRCVSKYWHVTNLIGQLLG+G
Sbjct: 61 DRCVSKYWHVTNLIGQLLGTG 81


>Medtr2g097870.2 | import inner membrane translocase protein | HC
          | chr2:41812716-41810575 | 20130731
          Length = 82

 Score =  137 bits (345), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 62/72 (86%), Positives = 69/72 (95%)

Query: 7  ALDKEQIFGMAEKEMEYRVELFNKMTQTCFNKCVENRYKESELNMGENSCIDRCVSKYWH 66
          ++   QIFGMAEKEMEYRVELFNKMTQ+CFNKCV+N+YKESELNMGEN+CIDRCVSKYWH
Sbjct: 8  SIKIRQIFGMAEKEMEYRVELFNKMTQSCFNKCVDNKYKESELNMGENTCIDRCVSKYWH 67

Query: 67 VTNLIGQLLGSG 78
          VTNLIGQLLG+G
Sbjct: 68 VTNLIGQLLGTG 79