Miyakogusa Predicted Gene

Lj3g3v1680460.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1680460.1 Non Characterized Hit- tr|Q2HS22|Q2HS22_MEDTR IMP
dehydrogenase/GMP reductase, putative OS=Medicago
,36.24,6e-17,seg,NULL,gene.g47877.t1.1
         (205 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g097800.1 | hypothetical protein | HC | chr2:41783019-4178...    62   5e-10

>Medtr2g097800.1 | hypothetical protein | HC |
           chr2:41783019-41788049 | 20130731
          Length = 321

 Score = 61.6 bits (148), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 99/226 (43%), Gaps = 60/226 (26%)

Query: 2   EDDFMAELTHHMAHFLLQ--DNDHSLDFSDSCYQTDNNF---------EQSRXXXXXXXX 50
           ++DF+ ELTH M+ F+LQ  D D S DFS    Q+ N+          + +         
Sbjct: 25  DEDFITELTHQMSQFMLQEEDIDDSFDFSSIASQSHNSELSWDLISSPDSTLWSPMSCNQ 84

Query: 51  XXXXXXXEEASPPDTPADYETQS---------SNSL---ETG------------------ 80
                   ++SPP TP  ++T++         +N++   ETG                  
Sbjct: 85  GSSEGSSLDSSPPATPC-WKTKTYANVVKGIQNNTMKRKETGTSKQNIHGSDIQSFKSCN 143

Query: 81  ---FCSYDSLIQEQIRAIELKE----------SPMPKPATCRKXXXXXXXXQRSTRPAPQ 127
              F S+ +LI+EQI+AIEL++          +  PK    ++          +    P+
Sbjct: 144 VDRFSSHKALIEEQIKAIELRKKHYISDIKQHALSPKQNEAKEKEIQKQGNGGNCTRLPR 203

Query: 128 IQQQHATDVGM-QALFNGGPGSIGGTGVFLPRG----SPTQSTKKQ 168
           +        GM QA+F GG GS  GTGVFLPR     +P++STKK+
Sbjct: 204 LASVQTGGGGMMQAVFLGGSGSRNGTGVFLPRAGTVVAPSESTKKK 249