Miyakogusa Predicted Gene

Lj3g3v1680390.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1680390.1 tr|Q9STE9|Q9STE9_ARATH Serine/threonine
kinase-like protein OS=Arabidopsis thaliana GN=T6H20.220
PE=,28.91,8e-16,coiled-coil,NULL; seg,NULL,gene.g47873.t1.1
         (433 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g097710.1 | hypothetical protein | HC | chr2:41743211-4174...   174   2e-43
Medtr4g064830.1 | hypothetical protein | HC | chr4:24185230-2418...   122   5e-28

>Medtr2g097710.1 | hypothetical protein | HC |
           chr2:41743211-41744737 | 20130731
          Length = 338

 Score =  174 bits (440), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 97/169 (57%), Positives = 116/169 (68%), Gaps = 8/169 (4%)

Query: 1   MSLSERTYKHVNTS-RSPTTVNVEQYLRGRGKXXXXXXXXXXXXXXXXXXXFERVKHHDP 59
           M   ERT KHV+T  RSPT   +EQ+LRG G                    FER+K+HDP
Sbjct: 1   MPYPERTLKHVDTKPRSPTIATMEQFLRG-GDSSRMSPTYSPTSPSPSSPFFERMKNHDP 59

Query: 60  EDDHGLYQKKSVLAKVKEKARRL--RTSLSGKRRQEDGNLTPSWGVSLXXXXXXXXXXX- 116
           E+D  LYQ+KSVLAKVKE+AR+L  R SLS ++RQ+D N+TPSWGVSL            
Sbjct: 60  EEDQSLYQRKSVLAKVKERARKLVLRNSLS-RKRQDDDNITPSWGVSLEDEEGEEEEDAE 118

Query: 117 YLGAPIYESELAPEDYKENARQHPRANPVISEKRVLRNAIKSGMEQDRD 165
           YLGAPIYESELAP++YKENARQHPRANPVISEKRVL+  +K G EQD++
Sbjct: 119 YLGAPIYESELAPDEYKENARQHPRANPVISEKRVLK-IVKPG-EQDQE 165


>Medtr4g064830.1 | hypothetical protein | HC |
           chr4:24185230-24187087 | 20130731
          Length = 423

 Score =  122 bits (307), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 83/229 (36%), Positives = 120/229 (52%), Gaps = 15/229 (6%)

Query: 1   MSLSERTYKHVNTSRSPTTVN-VEQYLRGRGKXXXXXXXXXXXXXXXXXXX------FER 53
           M+  ER  ++V+ ++SP ++  +EQ LRG                            F+R
Sbjct: 1   MAQLERPQRYVDGTKSPASIQTMEQLLRGEAASASKPKLSPSKSSSSSNCSSPSSPFFQR 60

Query: 54  VKHHDPEDDHGLYQKKSVLAKVKEKARRLRTSLSGKRRQEDGNLTPSWGVSLXXXXXXXX 113
           +KHHD E+DHG  QKKSV+ KVKEKA++LR +LS K+ ++    +PS G           
Sbjct: 61  LKHHDSEEDHGQNQKKSVITKVKEKAKKLRHTLSKKKHEDWTATSPSAGAG-SEGDGAEE 119

Query: 114 XXXYLGAPIYESELAPEDYKENARQHPRANPVISEKRVLRNAIKSGMEQDRDM-----LN 168
              Y GAP+YESE+APE YKEN RQH R +P   +  VL N  K G+EQ R+      L+
Sbjct: 120 DAEYHGAPMYESEMAPEGYKENVRQHSRMSPRSPQTHVLSNNEKLGLEQAREKTLSRSLS 179

Query: 169 XXXXXXXXXXXXXXXXHGGSNMTMTEKIAEK-LTPAFAKGPDVAHSTSS 216
                            G SN+ +T+ IAE+ ++PA+A+G + AH  +S
Sbjct: 180 RKTTHPAATAATSTTLSGPSNI-ITKPIAEENMSPAYAEGSETAHYITS 227



 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/113 (41%), Positives = 59/113 (52%), Gaps = 27/113 (23%)

Query: 345 SVKNYVVNESEAGNDEKTRSQVTSETMSRRK--GSIINEGVMEKFKVAVNSLVRNEEPSQ 402
           SVK Y++N+ E G DEK  S+V SE MS R+  G +   GV+EK + AV SL+R EEP +
Sbjct: 314 SVKEYLMNKFEPGEDEKALSKVISEAMSPRRTPGDV---GVIEKVREAVTSLLRTEEPEK 370

Query: 403 ----------------QYAVKTP---APSSIT---NNQEVAQEENRGRILQAN 433
                           Q +  T    APS I    N QE  + EN  RILQAN
Sbjct: 371 PADTDTTTTTTTHTPSQVSASTSTTHAPSQIPVSFNAQEAVEVENHDRILQAN 423



 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 37/56 (66%)

Query: 264 GEPMKDYLMNKFESRNYEETHSQVTPETVSHRRGSSNAGVMDKVKGAVNSLLRYED 319
           G  +K+YLMNKFE    E+  S+V  E +S RR   + GV++KV+ AV SLLR E+
Sbjct: 312 GVSVKEYLMNKFEPGEDEKALSKVISEAMSPRRTPGDVGVIEKVREAVTSLLRTEE 367