Miyakogusa Predicted Gene

Lj3g3v1667280.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1667280.1 Non Characterized Hit- tr|I1MGE4|I1MGE4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.27058
PE,77.27,0.000000000003, ,CUFF.42972.1
         (71 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g034010.1 | huntingtin-interacting K-like protein | HC | c...    75   9e-15

>Medtr2g034010.1 | huntingtin-interacting K-like protein | HC |
          chr2:12970294-12973745 | 20130731
          Length = 110

 Score = 75.5 bits (184), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 35/44 (79%), Positives = 41/44 (93%)

Query: 1  MEGAEEGVEMMLDSKDMQQQSKAFDKLTEGVEDRQVDSTRVQKV 44
          MEG +EGVEM++DSKDMQQQSKAFDKLT+ VEDRQ+DSTRVQ+ 
Sbjct: 1  MEGGDEGVEMVVDSKDMQQQSKAFDKLTDRVEDRQLDSTRVQEA 44