Miyakogusa Predicted Gene

Lj3g3v1666150.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1666150.1 tr|B9GJA2|B9GJA2_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_549147 PE=4
SV=1,72.83,7e-19,seg,NULL; DVL,DVL,CUFF.42963.1
         (89 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g064520.1 | rotundifolia-like protein | HC | chr4:24066775...    77   3e-15
Medtr2g097570.1 | DVL family protein | HC | chr2:41675036-416755...    74   2e-14
Medtr5g080260.1 | rotundifolia-like protein | HC | chr5:34340200...    54   3e-08
Medtr3g067980.1 | rotundifolia-like protein | HC | chr3:30614356...    54   3e-08
Medtr7g101850.1 | DVL family protein | HC | chr7:41073959-410742...    51   2e-07
Medtr8g023610.1 | rotundifolia-like protein | HC | chr8:8554719-...    48   2e-06

>Medtr4g064520.1 | rotundifolia-like protein | HC |
           chr4:24066775-24067469 | 20130731
          Length = 102

 Score = 77.0 bits (188), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 35/39 (89%), Positives = 37/39 (94%), Gaps = 2/39 (5%)

Query: 52  QKNPSIGRKCTNLAKEQKARFYIMRRCVAMLVCW--HGD 88
           QKNPSIG+KCTN+AKEQKARFYIMRRCVAMLVCW  HGD
Sbjct: 64  QKNPSIGKKCTNIAKEQKARFYIMRRCVAMLVCWHKHGD 102


>Medtr2g097570.1 | DVL family protein | HC |
          chr2:41675036-41675578 | 20130731
          Length = 86

 Score = 74.3 bits (181), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 37/41 (90%), Positives = 38/41 (92%), Gaps = 3/41 (7%)

Query: 52 QKNPS-IGRKCTNLAKEQKARFYIMRRCVAMLVCW--HGDS 89
          QKNPS IGRKCTNLAKEQKARFYIMRRCVAMLVCW  HGD+
Sbjct: 46 QKNPSSIGRKCTNLAKEQKARFYIMRRCVAMLVCWHKHGDN 86


>Medtr5g080260.1 | rotundifolia-like protein | HC |
          chr5:34340200-34340781 | 20130731
          Length = 89

 Score = 54.3 bits (129), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 23/38 (60%), Positives = 27/38 (71%)

Query: 52 QKNPSIGRKCTNLAKEQKARFYIMRRCVAMLVCWHGDS 89
          Q+  +  RKC  L KEQ+ARFYIMRRCV ML+CW   S
Sbjct: 50 QRKCAFARKCARLVKEQRARFYIMRRCVTMLICWRDYS 87


>Medtr3g067980.1 | rotundifolia-like protein | HC |
          chr3:30614356-30614982 | 20130731
          Length = 93

 Score = 53.9 bits (128), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 22/36 (61%), Positives = 27/36 (75%)

Query: 52 QKNPSIGRKCTNLAKEQKARFYIMRRCVAMLVCWHG 87
           K  +  RKC+ L KEQ+ARFYIMRRCV ML+CW+ 
Sbjct: 53 HKKCTFARKCSRLVKEQRARFYIMRRCVVMLICWND 88


>Medtr7g101850.1 | DVL family protein | HC |
          chr7:41073959-41074222 | 20130731
          Length = 64

 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 20/34 (58%), Positives = 29/34 (85%)

Query: 56 SIGRKCTNLAKEQKARFYIMRRCVAMLVCWHGDS 89
          S G+KC++L K+Q+A+FYI+RRC+AML+C H  S
Sbjct: 29 SFGQKCSHLVKKQRAKFYILRRCIAMLLCHHERS 62


>Medtr8g023610.1 | rotundifolia-like protein | HC |
          chr8:8554719-8554895 | 20130731
          Length = 58

 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 19/35 (54%), Positives = 25/35 (71%)

Query: 52 QKNPSIGRKCTNLAKEQKARFYIMRRCVAMLVCWH 86
          +K   I  KC +L KEQ+AR YI+RRC  ML+CW+
Sbjct: 19 KKRNGISSKCASLVKEQRARLYIVRRCATMLLCWY 53