Miyakogusa Predicted Gene
- Lj3g3v1618350.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v1618350.1 Non Characterized Hit- tr|A3BER1|A3BER1_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,42.61,0.0000000001,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; ZINC_FINGER_C2H2_1,Zinc finger, C2H2;
ADP-ribosylat,NODE_72166_length_2066_cov_36.444336.path2.1
(430 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g081420.1 | C2H2-like zinc finger protein | HC | chr4:3157... 637 0.0
Medtr2g010860.1 | C2H2-like zinc finger protein | HC | chr2:2551... 259 5e-69
Medtr2g010870.1 | C2H2-like zinc finger protein | HC | chr2:2562... 248 1e-65
Medtr1g024980.1 | C2H2-like zinc finger protein | HC | chr1:7957... 202 7e-52
Medtr3g072920.1 | nucleic acid-binding protein | HC | chr3:32823... 198 9e-51
Medtr3g463270.1 | C2H2-like zinc finger protein | HC | chr3:2532... 161 1e-39
Medtr5g012220.1 | zinc finger (C2H2 type) family protein, putati... 118 1e-26
Medtr4g101450.1 | zinc finger (C2H2 type) family protein, putati... 100 2e-21
Medtr5g094440.1 | nucleic acid-binding protein | HC | chr5:41275... 92 1e-18
>Medtr4g081420.1 | C2H2-like zinc finger protein | HC |
chr4:31572240-31574750 | 20130731
Length = 437
Score = 637 bits (1642), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/431 (78%), Positives = 360/431 (83%), Gaps = 7/431 (1%)
Query: 1 MPTVWFSLKRSLHCKSEPTDVHVPKSRKHLATILTKRAGTGRSGCSRSIANLKDVIHGSK 60
MPTVWFSLK+SLHCKSEP+DVH PK+RKHL+TILTK+ G GRSGCSRSIANLKDVIHGSK
Sbjct: 11 MPTVWFSLKKSLHCKSEPSDVHDPKTRKHLSTILTKKGGGGRSGCSRSIANLKDVIHGSK 70
Query: 61 RHLEKPPSCSPRSIGSSEFLNPITHEVILSNSRCELKITGYGGFQEGGVASDGNNNGGET 120
RH+EKPPSCSPRSIGSSEFLNPITHEVILSNSRCELKITG FQEG N +GG +
Sbjct: 71 RHIEKPPSCSPRSIGSSEFLNPITHEVILSNSRCELKITG---FQEGINGGGNNASGGSS 127
Query: 121 GDS--TFVGTLRXXXXXXXXXXXMHYFNPSYKTPATPPRKLSPFLSSDKEXXXXXXXXXX 178
T+VGTLR MHYFNPS++T +TPPRK SPFL S+
Sbjct: 128 SGGSSTYVGTLRPGTPGPGGHPTMHYFNPSFRTSSTPPRK-SPFLLSEGSNGFHGGGGVH 186
Query: 179 XXXRLSLETDSNGPCNVTCHKCGEQFSKWEAAEAHHLSKHAVTELVEGDSSRKIVEIICR 238
R+SLETDSNG VTCHKCGEQF+KWEAAEAHHLSKHAVTELVEGDSSRKIVEIICR
Sbjct: 187 SSNRMSLETDSNGSSTVTCHKCGEQFNKWEAAEAHHLSKHAVTELVEGDSSRKIVEIICR 246
Query: 239 TSWLKSENHCGRIERVLKVHNMQKTLARFEEYREMVKIKASKLQKKHPRCLADGNELLRF 298
TSWLKSENHCGRIERVLKVHNMQKTLARFEEYREMVKIKASKLQKKHPRCLADGNELLRF
Sbjct: 247 TSWLKSENHCGRIERVLKVHNMQKTLARFEEYREMVKIKASKLQKKHPRCLADGNELLRF 306
Query: 299 YGTTXXXXXXXXXXXXXXQYERCCVCRIIRNGFSSNKEELKGGIGVFTTSTSGRAFESIE 358
YGTT E+CCVCRIIR+GFS+ K+ELKGGIGVFTTSTSGRAFESIE
Sbjct: 307 YGTTVACSLGLNGSSSLCLSEKCCVCRIIRSGFSA-KKELKGGIGVFTTSTSGRAFESIE 365
Query: 359 ILGHDPSLRKALIVCRVIAGRVHRPLENIQEMAGQTGFDSLAGKVGLYSNIEELYLLNPR 418
I ++PSLRKALIVCRVIAGRVHRPLENIQEMA QTGFDSLAGKVGLYSNIEELYLLNPR
Sbjct: 366 IFDNEPSLRKALIVCRVIAGRVHRPLENIQEMASQTGFDSLAGKVGLYSNIEELYLLNPR 425
Query: 419 ALLPCFVVVCK 429
ALLPCFVV+CK
Sbjct: 426 ALLPCFVVICK 436
>Medtr2g010860.1 | C2H2-like zinc finger protein | HC |
chr2:2551625-2553304 | 20130731
Length = 378
Score = 259 bits (661), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 175/434 (40%), Positives = 233/434 (53%), Gaps = 63/434 (14%)
Query: 1 MPTVWFSLKRSLHCKSEPTDVHVPKSRKHLATILTKRAGTGRSGCSRSIANLKDVIHGSK 60
M SLK L CK V+ PK+ KH +R +G + + ++I GSK
Sbjct: 1 MLEFCVSLKNKLQCKPNKKHVYDPKTIKHQKGKNNQRTKSG-------LLDHSNIIQGSK 53
Query: 61 RHLEKPPSCSPRSIGSSEFLNPITHEVILSNSRCELKITGYGGFQEGGVASDGNNNGGET 120
R L S S GS E +PI HE++ +S G + S G +
Sbjct: 54 RFLTNSSSLYQESEGSIEISDPIIHEILHDSSI-------------GQICSSGRKD---- 96
Query: 121 GDSTFVGTLRXXXXXXXXXXXMHYFNPSYKTPATPPRKLSPFLSSDKEXXXXXXXXXXXX 180
F G+ R + ++ +T +P +++
Sbjct: 97 ----FEGSFR-----------------TTRSASTSSWLTNPVDYNEENVSSRT------- 128
Query: 181 XRLSLETDSN-GPCNVTCHKCGEQFSKWEAAEAHHLSKH-AVTELVEGDSSRKIVEIICR 238
RL ++ DS+ GP + CHKCGE+ E HH+++H +VTEL E SSRKIVE IC
Sbjct: 129 -RLLVQMDSDDGPSILICHKCGEKLKNLNDVETHHITEHYSVTEL-EETSSRKIVETICE 186
Query: 239 --TSWLKSENHCGRIERVLKVHNMQKTLARFEEYREMVKIKASKLQ-KKHPRCLADGNEL 295
TS++ SE +I+ +LKVHNM KT FEEYREMVKI A+KLQ K H RCL DGNEL
Sbjct: 187 SGTSFISSE--LWQIDCILKVHNMPKTFQCFEEYREMVKINANKLQIKNHARCLVDGNEL 244
Query: 296 LRFYGTTXXXXXXXXXXXXXXQYERCCVCRIIRNGFSSNKEELKGGIGVFTTSTSGRAFE 355
L F+GT + C VC+I+R+GFS+NK E +G +GV+T+STSG+AF+
Sbjct: 245 LMFHGTNIACSLGINGSYSLCTLDYCGVCQILRHGFSTNK-EFQGALGVYTSSTSGKAFD 303
Query: 356 SIEILGHDPSLRKALIVCRVIAGRVHRPLENIQEMAGQTGFDSLAGKVGLYSNIEELYLL 415
SI + RKA+I+CRVIAGRVH P E IQE +GFDS A K+ +SNIEEL LL
Sbjct: 304 SIMLSDERAFTRKAVIMCRVIAGRVHCPFEEIQEKI-DSGFDSFAEKISDHSNIEELCLL 362
Query: 416 NPRALLPCFVVVCK 429
NP+ALLPCFVV+ K
Sbjct: 363 NPKALLPCFVVIYK 376
>Medtr2g010870.1 | C2H2-like zinc finger protein | HC |
chr2:2562022-2566589 | 20130731
Length = 368
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 139/259 (53%), Positives = 174/259 (67%), Gaps = 13/259 (5%)
Query: 182 RLSLETDSNG--PCNVTCHKCGEQFSKWEAAEAHHLSKHAVTELVEGDSSRKIVEIICRT 239
RL +E DS P + C+KCGE+ A EAHH+++H+VTEL E DSSR+IV IIC
Sbjct: 99 RLLVEMDSEDCCPSILICYKCGEKLKNLTAVEAHHITEHSVTEL-EEDSSRQIVGIICGN 157
Query: 240 SWLKSENHCGRIERVLKVHNMQKTLARFEEYREMVKIKASKLQKKHPRCLADGNELLRFY 299
+ +I+ +LKVHNM KTLA FEEYRE+VKI A+KL HPRCLADGNELL F+
Sbjct: 158 GTNLVSSELRQIDCILKVHNMPKTLACFEEYREIVKINANKLHVNHPRCLADGNELLMFH 217
Query: 300 GTTXXXXXXXXXXXXXXQYERCCVCRIIRNGFSSNKEEL--------KGGIGVFTTSTSG 351
GT + C VC+I+R+GFS+N E +G +GV+TTS SG
Sbjct: 218 GTNIACSLGINNSFSLCDLDYCGVCQILRHGFSTNMEFQGAQGRNGPEGALGVYTTSISG 277
Query: 352 RAFESIEILGHDPSL-RKALIVCRVIAGRVHRPLENIQEMAGQTGFDSLAGKVGLYSNIE 410
+AFESI L D + RK++IVCRVIAGRV PLE IQE +GFDSLAG++ +YS+IE
Sbjct: 278 KAFESIIRLCDDEAFTRKSVIVCRVIAGRVLCPLEEIQENV-DSGFDSLAGRISVYSDIE 336
Query: 411 ELYLLNPRALLPCFVVVCK 429
ELYLLNP+ALLPCFVV+ K
Sbjct: 337 ELYLLNPKALLPCFVVIYK 355
>Medtr1g024980.1 | C2H2-like zinc finger protein | HC |
chr1:7957883-7961646 | 20130731
Length = 403
Score = 202 bits (513), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 113/234 (48%), Positives = 146/234 (62%), Gaps = 14/234 (5%)
Query: 197 CHKCGEQFSKWEAAEAHHLSKHAVTELVEGDSSRKIVEIICRTSWLKSENHCGRIERVLK 256
C +CGE F K E+ E H +HAV+EL DS R IVEII ++SWLK E +IER+LK
Sbjct: 176 CDQCGEVFPKIESLELHQAVRHAVSELGPEDSGRNIVEIIFKSSWLKRETPMCKIERILK 235
Query: 257 VHNMQKTLARFEEYREMVKIKASKLQKKHPRCLADGNELLRFYGTTXXXXXXXXXXXXXX 316
VHN Q+T+ RFEE R+ VK +AS KK+PRC ADGNELLRF+ T+
Sbjct: 236 VHNTQRTIQRFEECRDAVKSRASNTTKKNPRCAADGNELLRFHSTSLSCALGASGSSTLC 295
Query: 317 QYERCCVCRIIRNGFSSNKEELKGGIGVFTTSTSGRAFESIEILGHDPSLRKALIVCRVI 376
C VC IIR+GF + KG GV T ++SGRA ++ +G D R+A++VCRVI
Sbjct: 296 AVPGCGVCNIIRHGF-----QKKG--GVKTNASSGRAHDN--SVGEDS--RRAMLVCRVI 344
Query: 377 AGRVHRPLENIQEMAGQ---TGFDSLAGKVGLYSNIEELYLLNPRALLPCFVVV 427
AG+V R E + + FDS AG G YSN+E+L + NPRA+LPCFVV+
Sbjct: 345 AGKVKRVAEEGARVVSEEEMVCFDSTAGNAGSYSNLEDLTVFNPRAILPCFVVI 398
>Medtr3g072920.1 | nucleic acid-binding protein | HC |
chr3:32823995-32821730 | 20130731
Length = 452
Score = 198 bits (503), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 112/242 (46%), Positives = 156/242 (64%), Gaps = 21/242 (8%)
Query: 196 TCHKCGEQFSKWEAAEAHHLSKHAVTELVEGDSSRKIVEIICRTSWLKSENHCGRIERVL 255
+C CGE K E+ E H KHAV+EL D+S+ IVEII +SWLK ++ +I+R+L
Sbjct: 218 SCPDCGE-IMKTESLELHQAVKHAVSELGPEDTSKNIVEIIFHSSWLKKQSPVCKIDRIL 276
Query: 256 KVHNMQKTLARFEEYREMVKIKASKLQKKHPRCLADGNELLRFYGTTXX-XXXXXXXXXX 314
KV N QKT+ +FEEYR+ +K KA+ L KKHPRC+ADGNELLRF+ TT
Sbjct: 277 KVQNTQKTITKFEEYRDSIKAKATNLSKKHPRCIADGNELLRFHCTTFVCSLGLNGSSNL 336
Query: 315 XXQYERCCVCRIIRNGFSSNKEELKGGIGVFTTSTSGRAFES----IEILGHDP-SLRKA 369
+C VC II++GF +L GG G+ TT+TSG+A + +++ G + ++A
Sbjct: 337 CNSTSQCNVCGIIKHGF-----KLNGGDGILTTATSGKAHDKASSVLDVSGCESGDEKRA 391
Query: 370 LIVCRVIAGRVHRPLE---NIQEMAGQTGFDSL-AGKVGLYSNIEELYLLNPRALLPCFV 425
++VCRVIAGRV + +E N+ E +DS+ AG G YSN++ELY+ NPRA+LPCFV
Sbjct: 392 MLVCRVIAGRVKKNMEGGSNVMEE-----YDSVSAGDAGAYSNLDELYVNNPRAILPCFV 446
Query: 426 VV 427
V+
Sbjct: 447 VI 448
>Medtr3g463270.1 | C2H2-like zinc finger protein | HC |
chr3:25329997-25332232 | 20130731
Length = 389
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/242 (40%), Positives = 145/242 (59%), Gaps = 20/242 (8%)
Query: 197 CHKCGEQFSKWEAAEAHHLSKHAVTELVEGDSSRKIVEIICRTSWLKSENHCGRIERVLK 256
C CGE F K E H + HAV+EL+ D IV+II ++ W ++ N I R++K
Sbjct: 154 CTACGEIFQKPNLLENHQSANHAVSELIGSDPGHNIVQIIFKSGWPET-NTFPNIHRIMK 212
Query: 257 VHNMQKTLARFEEYREMVKIKASK--LQKKHPRCLADGNELLRFYGTTXXXXXXXXXXXX 314
+HN QK L++FEEYRE VKIKA++ +++ RC+ADGNEL+RF+ +T
Sbjct: 213 IHNSQKILSKFEEYRETVKIKAARGVTRRRDERCIADGNELMRFHCSTFLCELGHNGDSS 272
Query: 315 XXQYERCCVCRIIRNGFSSNKEELKGGIGVFTTSTSGRAF----ESIEILGHDPSLRKAL 370
+ C +C II++GFS + G+ T STS RA + IE ++++A+
Sbjct: 273 ICSQQFCNICGIIKSGFSPKLD------GISTLSTSWRAHVSIPDDIEREFKFMNVKRAM 326
Query: 371 IVCRVIAGRVHRPLEN-IQEMAGQTGFDSLA--GKVGLYSNI--EELYLLNPRALLPCFV 425
+VCRVIAGRV L++ + + G GFDS+ G+ G+Y+ + EEL + NPRA+LPCFV
Sbjct: 327 LVCRVIAGRVGSDLDDEVDKTDG--GFDSVMARGESGVYTRLDEEELVVFNPRAVLPCFV 384
Query: 426 VV 427
+V
Sbjct: 385 IV 386
>Medtr5g012220.1 | zinc finger (C2H2 type) family protein, putative
| HC | chr5:3627133-3625775 | 20130731
Length = 290
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/215 (38%), Positives = 117/215 (54%), Gaps = 34/215 (15%)
Query: 219 AVTELVEGDSSRKIVEIICRTSWLKSENHCGRIERVLKVHNMQKTLARFEEYREMVKIK- 277
++TEL EG SR +VEII TSW + GR+E + KVHN +T+ RFEEYRE VK +
Sbjct: 105 SLTELNEGHPSRNVVEIIFHTSW-GPKPFSGRVEMIFKVHNGSRTVTRFEEYRETVKTRP 163
Query: 278 ASKLQKKHPRCLADGNELLRFY--GTTXXXXXXXXXXXXXXQYERCCVCRIIRNGFSSNK 335
S+ +++ RC+ADGNE++RF+ G T Y CV F
Sbjct: 164 GSRNHEENARCVADGNEVMRFHCLGPT----------SGGGPYGGACV-----GSFPGG- 207
Query: 336 EELKGGIGVFTTSTSGRAFESIEILGHDPSLRKALIVCRVIAGRVHRPLENIQE-MAGQT 394
KG + T S SG A ES R+A++VCRVIAGRV + + + + G+
Sbjct: 208 ---KGTAAICTFSGSGGAHES----SGGGRGRRAMLVCRVIAGRVSKRVGFVDSLLDGRV 260
Query: 395 GFDSLAGKVGLYSNIEELYLLNPRALLPCFVVVCK 429
GFDS++G G EL + + RA+LPCF+++ +
Sbjct: 261 GFDSVSGDNG------ELLVFDSRAVLPCFLIIYR 289
>Medtr4g101450.1 | zinc finger (C2H2 type) family protein, putative
| HC | chr4:41957218-41958219 | 20130731
Length = 275
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 105/209 (50%), Gaps = 37/209 (17%)
Query: 222 ELVEGDSSRKIVEIICRTSWLKSENHCGRIERVLKVHNMQKTLARFEEYREMVKIKASKL 281
EL EG SR +V+II TSW +E GR+E + KV N +T++RFEE+RE VK +A+
Sbjct: 98 ELPEGHPSRNVVDIIFHTSWGNNE-FPGRVEMIFKVQNGARTMSRFEEFREAVKTRAASS 156
Query: 282 ---QKKHPRCLADGNELLRFYGTTXXXXXXXXXXXXXXQYERCCVCRIIRNGFSSNKEEL 338
+++ RC+ADGNE+++F+ + + +C +G E
Sbjct: 157 VSDSEENARCVADGNEVMQFHCLGPAEDGGPHGSWSFPERKGAAICTF--SGSGGAHENS 214
Query: 339 KGGIGVFTTSTSGRAFESIEILGHDPSLRKALIVCRVIAGRVHRPLENIQEMAGQTGFDS 398
GG G R A++VCRV+AGRV + + + + GFDS
Sbjct: 215 GGGKG-----------------------RMAMLVCRVVAGRVSKRVGYLDYK--RVGFDS 249
Query: 399 LAGKVGLYSNIEELYLLNPRALLPCFVVV 427
++G G EL + + RA+LPCF+++
Sbjct: 250 VSGDNG------ELLVFDSRAVLPCFLII 272
>Medtr5g094440.1 | nucleic acid-binding protein | HC |
chr5:41275804-41277174 | 20130731
Length = 270
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 103/214 (48%), Gaps = 15/214 (7%)
Query: 216 SKHAVTELVEGDSSRKIVEIICRTSWLKSENHCGRIERVLKVHNMQKTLARFEEYREMVK 275
S+ + EL GD SRKIVE+I + +W+ + ++ VL+V ++ L RFE+YRE VK
Sbjct: 68 SQARLFELGIGDPSRKIVEMIFQKAWMNTSKPLRKVRTVLRVRYSEEVLERFEKYREKVK 127
Query: 276 IKASKLQKKHPRCLADGNELLRFYGTTXX--XXXXXXXXXXXXQYERCCVCRIIRNGFSS 333
+ +HPR DGNELLRFY TT + C C++I+ F +
Sbjct: 128 EQYP----RHPRSTVDGNELLRFYVTTMRCFQGKPMKKVHDLCKDPSCRFCQVIQFNFDA 183
Query: 334 NKEELKGGIGVFTTSTSGRAFESIEILGHDPSLRKALIVCRVIAGRVHRPLENIQEMAGQ 393
E+ + S R + ++++ LIVCR+IAG ++ E +
Sbjct: 184 EHAEI--LLNTCEKDLSNRK----SVNARVKNVKRVLIVCRIIAGTAVNEVDGNYEECSE 237
Query: 394 TGFDSLAGKVGLYSNIEELYLLNPRALLPCFVVV 427
L + ++E + NP ++LPCFV++
Sbjct: 238 CDSTRLG---EMQFSLERFVVKNPSSILPCFVII 268